Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 AC027124.2-201ENST00000428249 105 ntBASIC3.06□□□□□ -1.92
CDC42EP3Q9UKI2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.06□□□□□ -1.92
CDC42EP3Q9UKI2 AC006539.3-201ENST00000454258 129 ntBASIC3.06□□□□□ -1.92
CDC42EP3Q9UKI2 AL031183.1-201ENST00000457667 207 ntBASIC3.06□□□□□ -1.92
CDC42EP3Q9UKI2 RPL36AP48-201ENST00000485521 314 ntBASIC3.06□□□□□ -1.92
CDC42EP3Q9UKI2 AC087441.2-201ENST00000529141 262 ntBASIC3.06□□□□□ -1.92
CDC42EP3Q9UKI2 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.06□□□□□ -1.92
CDC42EP3Q9UKI2 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.06□□□□□ -1.92
CDC42EP3Q9UKI2 SNORD11B-201ENST00000607707 90 ntBASIC3.06□□□□□ -1.92
CDC42EP3Q9UKI2 XIST_intron.1-201ENST00000619444 68 ntBASIC3.06□□□□□ -1.92
CDC42EP3Q9UKI2 U6.106-201ENST00000636360 105 ntBASIC3.06□□□□□ -1.92
CDC42EP3Q9UKI2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDC42EP3Q9UKI2 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDC42EP3Q9UKI2 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 Y_RNA.304-201ENST00000365011 112 ntBASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 Y_RNA.597-201ENST00000410463 100 ntBASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 RNA5SP120-201ENST00000410900 112 ntBASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 OOSP1P1-201ENST00000423265 274 ntBASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 RNU6-789P-201ENST00000517105 102 ntBASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 AC022559.1-201ENST00000520905 205 ntBASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 AC010620.2-201ENST00000600135 313 ntBASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 AC005828.6-201ENST00000606610 232 ntBASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 snoU18.1-201ENST00000629629 71 ntBASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.05□□□□□ -1.92
CDC42EP3Q9UKI2 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.04□□□□□ -1.92
CDC42EP3Q9UKI2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDC42EP3Q9UKI2 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDC42EP3Q9UKI2 RNU1-105P-201ENST00000363470 161 ntBASIC3.04□□□□□ -1.92
CDC42EP3Q9UKI2 RNU1-33P-201ENST00000364249 162 ntBASIC3.04□□□□□ -1.92
CDC42EP3Q9UKI2 Y_RNA.233-201ENST00000364407 101 ntBASIC3.04□□□□□ -1.92
CDC42EP3Q9UKI2 Y_RNA.240-201ENST00000364469 95 ntBASIC3.04□□□□□ -1.92
CDC42EP3Q9UKI2 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CDC42EP3Q9UKI2 RNU6-1248P-201ENST00000391096 64 ntBASIC3.04□□□□□ -1.92
CDC42EP3Q9UKI2 UBE2DNL-203ENST00000474922 222 ntBASIC3.04□□□□□ -1.92
CDC42EP3Q9UKI2 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.04□□□□□ -1.92
CDC42EP3Q9UKI2 RNU6-436P-201ENST00000516171 114 ntBASIC3.04□□□□□ -1.92
CDC42EP3Q9UKI2 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.04□□□□□ -1.92
CDC42EP3Q9UKI2 RNU2-44P-201ENST00000516795 194 ntBASIC3.04□□□□□ -1.92
CDC42EP3Q9UKI2 AP005660.1-201ENST00000522972 293 ntBASIC3.04□□□□□ -1.92
CDC42EP3Q9UKI2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.04□□□□□ -1.92
CDC42EP3Q9UKI2 MIR3145-201ENST00000580727 82 ntBASIC3.04□□□□□ -1.92
CDC42EP3Q9UKI2 DEFB117-201ENST00000602356 141 ntBASIC3.04□□□□□ -1.92
CDC42EP3Q9UKI2 RPL17P51-201ENST00000605218 238 ntBASIC3.04□□□□□ -1.92
CDC42EP3Q9UKI2 RNU1-30P-201ENST00000606575 163 ntBASIC3.04□□□□□ -1.92
CDC42EP3Q9UKI2 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDC42EP3Q9UKI2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDC42EP3Q9UKI2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
CDC42EP3Q9UKI2 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CDC42EP3Q9UKI2 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.03□□□□□ -1.92
CDC42EP3Q9UKI2 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CDC42EP3Q9UKI2 SNORA18.2-201ENST00000383865 132 ntBASIC3.03□□□□□ -1.92
CDC42EP3Q9UKI2 RNU6-211P-201ENST00000384047 107 ntBASIC3.03□□□□□ -1.92
CDC42EP3Q9UKI2 U3.40-201ENST00000408706 208 ntBASIC3.03□□□□□ -1.92
CDC42EP3Q9UKI2 AC097463.2-201ENST00000421074 142 ntBASIC3.03□□□□□ -1.92
CDC42EP3Q9UKI2 AC002075.2-201ENST00000425207 252 ntBASIC3.03□□□□□ -1.92
CDC42EP3Q9UKI2 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.03□□□□□ -1.92
CDC42EP3Q9UKI2 RPL31P41-201ENST00000477967 372 ntBASIC3.03□□□□□ -1.92
CDC42EP3Q9UKI2 AC109925.1-201ENST00000478069 331 ntBASIC3.03□□□□□ -1.92
CDC42EP3Q9UKI2 AC074198.2-201ENST00000508153 258 ntBASIC3.03□□□□□ -1.92
CDC42EP3Q9UKI2 RN7SKP83-201ENST00000516512 178 ntBASIC3.03□□□□□ -1.92
CDC42EP3Q9UKI2 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.03□□□□□ -1.92
CDC42EP3Q9UKI2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.03□□□□□ -1.92
CDC42EP3Q9UKI2 MIR5692C2-201ENST00000577959 77 ntBASIC3.03□□□□□ -1.92
CDC42EP3Q9UKI2 MIR5006-201ENST00000583027 110 ntBASIC3.03□□□□□ -1.92
CDC42EP3Q9UKI2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.03□□□□□ -1.92
CDC42EP3Q9UKI2 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CDC42EP3Q9UKI2 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 RNU6-1272P-201ENST00000362776 107 ntBASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 RNU6-653P-201ENST00000363074 106 ntBASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 SNORD32B-201ENST00000364460 84 ntBASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 Y_RNA.243-201ENST00000364481 109 ntBASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 Y_RNA.262-201ENST00000364641 102 ntBASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 Y_RNA.329-201ENST00000365209 107 ntBASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 MIR490-201ENST00000384865 128 ntBASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 MIR591-201ENST00000385290 95 ntBASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 RNU6-493P-201ENST00000391321 108 ntBASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 EIF4EP4-201ENST00000424916 578 ntBASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 RPS27P26-201ENST00000494583 239 ntBASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 RN7SKP209-201ENST00000516888 304 ntBASIC3.02□□□□□ -1.93
CDC42EP3Q9UKI2 AC008011.1-201ENST00000545989 227 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms