Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AC004386.2-201ENST00000441858 148 ntBASIC3.68□□□□□ -1.82
DDX41Q9UJV9 RPS12P18-201ENST00000442381 270 ntBASIC3.68□□□□□ -1.82
DDX41Q9UJV9 IFNA11P-201ENST00000446352 526 ntBASIC3.68□□□□□ -1.82
DDX41Q9UJV9 RPL23AP67-201ENST00000465341 474 ntBASIC3.68□□□□□ -1.82
DDX41Q9UJV9 AC091179.3-201ENST00000474761 144 ntBASIC3.68□□□□□ -1.82
DDX41Q9UJV9 SCARNA3-201ENST00000517097 143 ntBASIC3.68□□□□□ -1.82
DDX41Q9UJV9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.68□□□□□ -1.82
DDX41Q9UJV9 SNORD113-5-201ENST00000607261 78 ntBASIC3.68□□□□□ -1.82
DDX41Q9UJV9 AC017071.1-201ENST00000564407 2204 ntBASIC3.68□□□□□ -1.82
DDX41Q9UJV9 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
DDX41Q9UJV9 SNORA72.2-201ENST00000365028 127 ntBASIC3.67□□□□□ -1.82
DDX41Q9UJV9 SNORA18.2-201ENST00000383865 132 ntBASIC3.67□□□□□ -1.82
DDX41Q9UJV9 Y_RNA.447-201ENST00000384184 113 ntBASIC3.67□□□□□ -1.82
DDX41Q9UJV9 AL033519.2-201ENST00000403958 392 ntBASIC3.67□□□□□ -1.82
DDX41Q9UJV9 U6atac.2-201ENST00000408644 118 ntBASIC3.67□□□□□ -1.82
DDX41Q9UJV9 AC108059.2-201ENST00000434626 151 ntBASIC3.67□□□□□ -1.82
DDX41Q9UJV9 RNU6-625P-201ENST00000459412 107 ntBASIC3.67□□□□□ -1.82
DDX41Q9UJV9 RPL26P26-201ENST00000480251 434 ntBASIC3.67□□□□□ -1.82
DDX41Q9UJV9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.67□□□□□ -1.82
DDX41Q9UJV9 RNU6-344P-201ENST00000516635 111 ntBASIC3.67□□□□□ -1.82
DDX41Q9UJV9 RNU2-44P-201ENST00000516795 194 ntBASIC3.67□□□□□ -1.82
DDX41Q9UJV9 RNU7-110P-201ENST00000516891 62 ntBASIC3.67□□□□□ -1.82
DDX41Q9UJV9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.67□□□□□ -1.82
DDX41Q9UJV9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.67□□□□□ -1.82
DDX41Q9UJV9 AC018448.1-201ENST00000552843 316 ntBASIC3.67□□□□□ -1.82
DDX41Q9UJV9 AC005176.2-201ENST00000596933 147 ntBASIC3.67□□□□□ -1.82
DDX41Q9UJV9 SNORD11B-201ENST00000607707 90 ntBASIC3.67□□□□□ -1.82
DDX41Q9UJV9 uc_338.1-201ENST00000612113 180 ntBASIC3.67□□□□□ -1.82
DDX41Q9UJV9 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.67□□□□□ -1.82
DDX41Q9UJV9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
DDX41Q9UJV9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
DDX41Q9UJV9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
DDX41Q9UJV9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.66□□□□□ -1.82
DDX41Q9UJV9 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
DDX41Q9UJV9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
DDX41Q9UJV9 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
DDX41Q9UJV9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
DDX41Q9UJV9 Y_RNA.14-201ENST00000362415 103 ntBASIC3.66□□□□□ -1.82
DDX41Q9UJV9 RNU4-90P-201ENST00000362773 141 ntBASIC3.66□□□□□ -1.82
DDX41Q9UJV9 RNU6-727P-201ENST00000363592 107 ntBASIC3.66□□□□□ -1.82
DDX41Q9UJV9 SNORA68.1-201ENST00000364537 132 ntBASIC3.66□□□□□ -1.82
DDX41Q9UJV9 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.66□□□□□ -1.82
DDX41Q9UJV9 RNU6-1310P-201ENST00000384153 107 ntBASIC3.66□□□□□ -1.82
DDX41Q9UJV9 MIR215-201ENST00000384858 110 ntBASIC3.66□□□□□ -1.82
DDX41Q9UJV9 AC009237.7-201ENST00000447357 229 ntBASIC3.66□□□□□ -1.82
DDX41Q9UJV9 AC107934.2-201ENST00000518653 310 ntBASIC3.66□□□□□ -1.82
DDX41Q9UJV9 RRN3P3-201ENST00000549207 578 ntBASIC3.66□□□□□ -1.82
DDX41Q9UJV9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.66□□□□□ -1.82
DDX41Q9UJV9 MIR2682-201ENST00000580305 110 ntBASIC3.66□□□□□ -1.82
DDX41Q9UJV9 MIR4513-201ENST00000581077 86 ntBASIC3.66□□□□□ -1.82
DDX41Q9UJV9 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.66□□□□□ -1.82
DDX41Q9UJV9 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.66□□□□□ -1.82
DDX41Q9UJV9 AL391987.6-201ENST00000305671 199 ntBASIC3.65□□□□□ -1.83
DDX41Q9UJV9 MIR335-201ENST00000362173 94 ntBASIC3.65□□□□□ -1.83
DDX41Q9UJV9 snoU2_19.2-201ENST00000363024 80 ntBASIC3.65□□□□□ -1.83
DDX41Q9UJV9 SNORA51.4-201ENST00000364993 124 ntBASIC3.65□□□□□ -1.83
DDX41Q9UJV9 SNORD21-201ENST00000383953 95 ntBASIC3.65□□□□□ -1.83
DDX41Q9UJV9 Y_RNA.478-201ENST00000384358 107 ntBASIC3.65□□□□□ -1.83
DDX41Q9UJV9 MIR218-1-201ENST00000384999 110 ntBASIC3.65□□□□□ -1.83
DDX41Q9UJV9 RNU2-38P-201ENST00000410856 79 ntBASIC3.65□□□□□ -1.83
DDX41Q9UJV9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.65□□□□□ -1.83
DDX41Q9UJV9 RN7SL863P-201ENST00000462370 296 ntBASIC3.65□□□□□ -1.83
DDX41Q9UJV9 RPS23P5-201ENST00000495419 428 ntBASIC3.65□□□□□ -1.83
DDX41Q9UJV9 RNA5SP341-201ENST00000516261 117 ntBASIC3.65□□□□□ -1.83
DDX41Q9UJV9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.65□□□□□ -1.83
DDX41Q9UJV9 MIR3199-1-201ENST00000582434 88 ntBASIC3.65□□□□□ -1.83
DDX41Q9UJV9 AC069294.1-201ENST00000608397 350 ntBASIC3.65□□□□□ -1.83
DDX41Q9UJV9 AC090425.1-201ENST00000610007 140 ntBASIC3.65□□□□□ -1.83
DDX41Q9UJV9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.65□□□□□ -1.83
DDX41Q9UJV9 AL357075.2-201ENST00000614906 189 ntBASIC3.65□□□□□ -1.83
DDX41Q9UJV9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
DDX41Q9UJV9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
DDX41Q9UJV9 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
DDX41Q9UJV9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
DDX41Q9UJV9 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.65□□□□□ -1.83
DDX41Q9UJV9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
DDX41Q9UJV9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
DDX41Q9UJV9 RNU6-961P-201ENST00000363893 105 ntBASIC3.64□□□□□ -1.83
DDX41Q9UJV9 Y_RNA.518-201ENST00000384552 113 ntBASIC3.64□□□□□ -1.83
DDX41Q9UJV9 MIR1294-201ENST00000408503 142 ntBASIC3.64□□□□□ -1.83
DDX41Q9UJV9 MIR548H3-201ENST00000408771 118 ntBASIC3.64□□□□□ -1.83
DDX41Q9UJV9 Y_RNA.597-201ENST00000410463 100 ntBASIC3.64□□□□□ -1.83
DDX41Q9UJV9 RPL23AP36-201ENST00000413895 458 ntBASIC3.64□□□□□ -1.83
DDX41Q9UJV9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.64□□□□□ -1.83
DDX41Q9UJV9 RPL30P4-201ENST00000429309 333 ntBASIC3.64□□□□□ -1.83
DDX41Q9UJV9 RNU6-794P-201ENST00000517261 64 ntBASIC3.64□□□□□ -1.83
DDX41Q9UJV9 RNU6-586P-201ENST00000517265 104 ntBASIC3.64□□□□□ -1.83
DDX41Q9UJV9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.64□□□□□ -1.83
DDX41Q9UJV9 MIR3668-201ENST00000582138 75 ntBASIC3.64□□□□□ -1.83
DDX41Q9UJV9 AC037487.3-201ENST00000606668 112 ntBASIC3.64□□□□□ -1.83
DDX41Q9UJV9 AL162274.2-201ENST00000614406 332 ntBASIC3.64□□□□□ -1.83
DDX41Q9UJV9 SDR42E1P4-201ENST00000620894 481 ntBASIC3.64□□□□□ -1.83
DDX41Q9UJV9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.64□□□□□ -1.83
DDX41Q9UJV9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
DDX41Q9UJV9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
DDX41Q9UJV9 MIR422A-201ENST00000362286 90 ntBASIC3.63□□□□□ -1.83
DDX41Q9UJV9 RNU6-1318P-201ENST00000365389 103 ntBASIC3.63□□□□□ -1.83
DDX41Q9UJV9 SNORA53-201ENST00000391141 249 ntBASIC3.63□□□□□ -1.83
DDX41Q9UJV9 SNORA12-201ENST00000391162 147 ntBASIC3.63□□□□□ -1.83
DDX41Q9UJV9 RNA5SP229-201ENST00000410809 99 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms