Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 MIR151B-201ENST00000584249 96 ntBASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 MIR4424-201ENST00000585257 86 ntBASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 AC012507.3-201ENST00000603556 477 ntBASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 AC009994.1-201ENST00000606889 253 ntBASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 AC063944.3-201ENST00000609969 533 ntBASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 U2.17-201ENST00000611454 95 ntBASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 AL078604.3-201ENST00000615580 211 ntBASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 MIR6788-201ENST00000618842 66 ntBASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 RNU6-82P-201ENST00000363970 107 ntBASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 Y_RNA.255-201ENST00000364581 97 ntBASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 SNORD31B-201ENST00000364977 69 ntBASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 RNU6-827P-201ENST00000365553 106 ntBASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 AC016925.1-201ENST00000458303 298 ntBASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 AK3P2-201ENST00000507976 429 ntBASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 RN7SKP179-201ENST00000516126 217 ntBASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 HIF1AP1-201ENST00000553642 175 ntBASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 AC109446.1-201ENST00000566172 220 ntBASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 AC087683.1-201ENST00000591187 441 ntBASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 AC078795.3-201ENST00000602913 472 ntBASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 AC121247.2-201ENST00000604776 136 ntBASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
CTNNA3Q9UI47 MIR302D-201ENST00000362275 68 ntBASIC1.38□□□□□ -2.19
CTNNA3Q9UI47 RNU6-348P-201ENST00000384386 107 ntBASIC1.38□□□□□ -2.19
CTNNA3Q9UI47 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.38□□□□□ -2.19
CTNNA3Q9UI47 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.38□□□□□ -2.19
CTNNA3Q9UI47 AL591704.2-201ENST00000421658 181 ntBASIC1.38□□□□□ -2.19
CTNNA3Q9UI47 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.38□□□□□ -2.19
CTNNA3Q9UI47 AC027119.1-201ENST00000440877 241 ntBASIC1.38□□□□□ -2.19
CTNNA3Q9UI47 MTCO2P18-201ENST00000457151 658 ntBASIC1.38□□□□□ -2.19
CTNNA3Q9UI47 RNU7-138P-201ENST00000459479 64 ntBASIC1.38□□□□□ -2.19
CTNNA3Q9UI47 RPS29P1-201ENST00000465274 159 ntBASIC1.38□□□□□ -2.19
CTNNA3Q9UI47 HMGB1P29-201ENST00000505659 499 ntBASIC1.38□□□□□ -2.19
CTNNA3Q9UI47 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.38□□□□□ -2.19
CTNNA3Q9UI47 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
CTNNA3Q9UI47 AC103996.1-201ENST00000555468 102 ntBASIC1.38□□□□□ -2.19
CTNNA3Q9UI47 MTATP6P3-201ENST00000581686 676 ntBASIC1.38□□□□□ -2.19
CTNNA3Q9UI47 AC040904.1-201ENST00000590850 223 ntBASIC1.38□□□□□ -2.19
CTNNA3Q9UI47 AC107304.1-201ENST00000604229 296 ntBASIC1.38□□□□□ -2.19
CTNNA3Q9UI47 Z98751.3-201ENST00000604447 521 ntBASIC1.38□□□□□ -2.19
CTNNA3Q9UI47 MIR6779-201ENST00000617283 64 ntBASIC1.38□□□□□ -2.19
CTNNA3Q9UI47 SNORA43.4-201ENST00000629559 138 ntBASIC1.38□□□□□ -2.19
CTNNA3Q9UI47 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
CTNNA3Q9UI47 AC121333.1-201ENST00000567488 2709 ntBASIC1.37□□□□□ -2.19
CTNNA3Q9UI47 SNORA32.2-201ENST00000384049 122 ntBASIC1.37□□□□□ -2.19
CTNNA3Q9UI47 RN7SKP142-201ENST00000411236 328 ntBASIC1.37□□□□□ -2.19
CTNNA3Q9UI47 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.37□□□□□ -2.19
CTNNA3Q9UI47 C8orf59P1-201ENST00000429930 303 ntBASIC1.37□□□□□ -2.19
CTNNA3Q9UI47 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.37□□□□□ -2.19
CTNNA3Q9UI47 AC073415.1-201ENST00000449240 153 ntBASIC1.37□□□□□ -2.19
CTNNA3Q9UI47 RPL30P7-201ENST00000479312 323 ntBASIC1.37□□□□□ -2.19
CTNNA3Q9UI47 AL163973.1-201ENST00000484753 577 ntBASIC1.37□□□□□ -2.19
CTNNA3Q9UI47 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.37□□□□□ -2.19
CTNNA3Q9UI47 AC010493.1-201ENST00000513479 292 ntBASIC1.37□□□□□ -2.19
CTNNA3Q9UI47 AC080078.3-201ENST00000605407 463 ntBASIC1.37□□□□□ -2.19
CTNNA3Q9UI47 AC083806.3-201ENST00000614016 455 ntBASIC1.37□□□□□ -2.19
CTNNA3Q9UI47 PVT1_3.1-201ENST00000620853 95 ntBASIC1.37□□□□□ -2.19
CTNNA3Q9UI47 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.37□□□□□ -2.19
CTNNA3Q9UI47 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
CTNNA3Q9UI47 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CTNNA3Q9UI47 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CTNNA3Q9UI47 RNU6-996P-201ENST00000365438 107 ntBASIC1.36□□□□□ -2.19
CTNNA3Q9UI47 SNORA75-201ENST00000384158 137 ntBASIC1.36□□□□□ -2.19
CTNNA3Q9UI47 SNORD116-8-201ENST00000384365 95 ntBASIC1.36□□□□□ -2.19
CTNNA3Q9UI47 MIR222-201ENST00000384992 110 ntBASIC1.36□□□□□ -2.19
CTNNA3Q9UI47 MRPL35P1-201ENST00000404272 572 ntBASIC1.36□□□□□ -2.19
CTNNA3Q9UI47 RNU2-9P-201ENST00000410194 145 ntBASIC1.36□□□□□ -2.19
CTNNA3Q9UI47 AC012306.1-201ENST00000423267 114 ntBASIC1.36□□□□□ -2.19
CTNNA3Q9UI47 MTCO2P19-201ENST00000427513 598 ntBASIC1.36□□□□□ -2.19
CTNNA3Q9UI47 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.36□□□□□ -2.19
CTNNA3Q9UI47 USP9YP29-201ENST00000445112 563 ntBASIC1.36□□□□□ -2.19
CTNNA3Q9UI47 AL031274.1-201ENST00000450334 232 ntBASIC1.36□□□□□ -2.19
CTNNA3Q9UI47 AC007395.1-201ENST00000451333 677 ntBASIC1.36□□□□□ -2.19
CTNNA3Q9UI47 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.36□□□□□ -2.19
CTNNA3Q9UI47 RNU7-63P-201ENST00000459054 62 ntBASIC1.36□□□□□ -2.19
CTNNA3Q9UI47 AC093852.1-201ENST00000503587 266 ntBASIC1.36□□□□□ -2.19
CTNNA3Q9UI47 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.36□□□□□ -2.19
CTNNA3Q9UI47 RNA5SP481-201ENST00000516814 122 ntBASIC1.36□□□□□ -2.19
CTNNA3Q9UI47 MTND4P7-201ENST00000523876 130 ntBASIC1.36□□□□□ -2.19
CTNNA3Q9UI47 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.36□□□□□ -2.19
CTNNA3Q9UI47 AL158063.1-201ENST00000615349 536 ntBASIC1.36□□□□□ -2.19
CTNNA3Q9UI47 AC010615.1-201ENST00000594254 1764 ntBASIC1.35□□□□□ -2.19
CTNNA3Q9UI47 RNU6-1080P-201ENST00000383982 107 ntBASIC1.35□□□□□ -2.19
CTNNA3Q9UI47 RNU6-1065P-201ENST00000384513 106 ntBASIC1.35□□□□□ -2.19
CTNNA3Q9UI47 MIR618-201ENST00000385287 98 ntBASIC1.35□□□□□ -2.19
CTNNA3Q9UI47 RNU6-1106P-201ENST00000390845 107 ntBASIC1.35□□□□□ -2.19
CTNNA3Q9UI47 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
CTNNA3Q9UI47 RPS26P42-201ENST00000413485 326 ntBASIC1.35□□□□□ -2.19
CTNNA3Q9UI47 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms