Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SNORD53B-201ENST00000577887 78 ntBASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 CPDP1-201ENST00000579660 283 ntBASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 FGF7P1-201ENST00000582820 288 ntBASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 BX248123.2-201ENST00000606318 124 ntBASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 MIR8076-201ENST00000611401 83 ntBASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 FAM157A-202ENST00000615155 405 ntBASIC1.41□□□□□ -2.18
CLCF1Q9UBD9 MIR378A-201ENST00000362177 66 ntBASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 Y_RNA.41-201ENST00000362646 102 ntBASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 SNORD113-7-201ENST00000363762 77 ntBASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 RNY3P3-201ENST00000363816 102 ntBASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 RNA5SP363-201ENST00000365072 115 ntBASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 RNU6-968P-201ENST00000384076 107 ntBASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 MIR521-1-201ENST00000384902 87 ntBASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 MIR181A1-201ENST00000385026 110 ntBASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 AC009310.1-201ENST00000414414 451 ntBASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 SNRPEP10-201ENST00000420249 274 ntBASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 AC139712.2-201ENST00000424302 339 ntBASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 MTCO2P7-201ENST00000446518 666 ntBASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 AC007395.1-201ENST00000451333 677 ntBASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 snoU13.6-201ENST00000458785 104 ntBASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 TRBVA-201ENST00000498804 316 ntBASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 AC022254.1-201ENST00000567857 235 ntBASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CLCF1Q9UBD9 AC245060.5-201ENST00000610778 3293 ntBASIC1.39□□□□□ -2.19
CLCF1Q9UBD9 RNU6-562P-201ENST00000362731 107 ntBASIC1.39□□□□□ -2.19
CLCF1Q9UBD9 RNU6-451P-201ENST00000362921 107 ntBASIC1.39□□□□□ -2.19
CLCF1Q9UBD9 RNU5B-2P-201ENST00000363036 113 ntBASIC1.39□□□□□ -2.19
CLCF1Q9UBD9 RNU6-60P-201ENST00000364792 103 ntBASIC1.39□□□□□ -2.19
CLCF1Q9UBD9 RPS26P42-201ENST00000413485 326 ntBASIC1.39□□□□□ -2.19
CLCF1Q9UBD9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.39□□□□□ -2.19
CLCF1Q9UBD9 AC016925.1-201ENST00000458303 298 ntBASIC1.39□□□□□ -2.19
CLCF1Q9UBD9 AC130509.1-201ENST00000464158 433 ntBASIC1.39□□□□□ -2.19
CLCF1Q9UBD9 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.39□□□□□ -2.19
CLCF1Q9UBD9 Y_RNA.665-201ENST00000516177 98 ntBASIC1.39□□□□□ -2.19
CLCF1Q9UBD9 RNVU1-2-201ENST00000516326 135 ntBASIC1.39□□□□□ -2.19
CLCF1Q9UBD9 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.39□□□□□ -2.19
CLCF1Q9UBD9 AL645939.4-201ENST00000604495 135 ntBASIC1.39□□□□□ -2.19
CLCF1Q9UBD9 AF250324.2-201ENST00000608299 610 ntBASIC1.39□□□□□ -2.19
CLCF1Q9UBD9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.39□□□□□ -2.19
CLCF1Q9UBD9 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.39□□□□□ -2.19
CLCF1Q9UBD9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 Y_RNA.38-201ENST00000362617 102 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 Y_RNA.132-201ENST00000363421 102 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 SNORA18.2-201ENST00000383865 132 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 RNU6-784P-201ENST00000384330 106 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 Y_RNA.530-201ENST00000384587 101 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 SNORA12.2-201ENST00000391040 156 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 MIR1323-201ENST00000408090 73 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 Y_RNA.595-201ENST00000410403 105 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 Y_RNA.615-201ENST00000410769 117 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 BTF3P4-201ENST00000418852 495 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 NCOR1P3-201ENST00000420479 303 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 HMGN2P26-201ENST00000463169 339 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 AC096745.1-201ENST00000509945 370 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 AC109635.3-201ENST00000529536 185 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 ZNF519P2-201ENST00000557032 169 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 AC026470.2-201ENST00000561492 181 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 MIR4498-201ENST00000577599 66 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 AC146944.4-201ENST00000602697 718 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 AC010900.2-201ENST00000604508 210 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 AC016727.1-205ENST00000605437 569 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 snoU13.31-201ENST00000607291 104 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 AC104458.1-201ENST00000608243 463 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 AL133215.3-201ENST00000609801 448 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 AL359697.1-201ENST00000624879 587 ntBASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
CLCF1Q9UBD9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 MIR340-201ENST00000362125 95 ntBASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 Y_RNA.9-201ENST00000362354 101 ntBASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 RNU1-42P-201ENST00000364033 160 ntBASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 Y_RNA.256-201ENST00000364594 104 ntBASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 Y_RNA.402-201ENST00000383972 102 ntBASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 MIR517C-201ENST00000385103 95 ntBASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 SNORA67.6-201ENST00000391093 99 ntBASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 MIR300-201ENST00000401138 83 ntBASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 RNA5SP100-201ENST00000410903 110 ntBASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 RNA5SP59-201ENST00000410922 110 ntBASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 VN1R36P-201ENST00000414936 291 ntBASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 AP1B1P2-201ENST00000416196 106 ntBASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 USP9YP28-201ENST00000435142 589 ntBASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.37□□□□□ -2.19
CLCF1Q9UBD9 SUMO2P18-201ENST00000518873 252 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 197 ms