Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 RNU7-87P-201ENST00000459343 62 ntBASIC2.36□□□□□ -2.03
HCN3Q9P1Z3 SNORD19B-201ENST00000459623 84 ntBASIC2.36□□□□□ -2.03
HCN3Q9P1Z3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.36□□□□□ -2.03
HCN3Q9P1Z3 RNU6-1198P-201ENST00000516904 67 ntBASIC2.36□□□□□ -2.03
HCN3Q9P1Z3 RNU6-58P-201ENST00000517143 103 ntBASIC2.36□□□□□ -2.03
HCN3Q9P1Z3 RNA5SP402-201ENST00000517148 110 ntBASIC2.36□□□□□ -2.03
HCN3Q9P1Z3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.36□□□□□ -2.03
HCN3Q9P1Z3 AC026470.2-201ENST00000561492 181 ntBASIC2.36□□□□□ -2.03
HCN3Q9P1Z3 AC026271.5-201ENST00000577873 130 ntBASIC2.36□□□□□ -2.03
HCN3Q9P1Z3 MIR4446-201ENST00000578505 67 ntBASIC2.36□□□□□ -2.03
HCN3Q9P1Z3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HCN3Q9P1Z3 AL117336.2-201ENST00000602435 335 ntBASIC2.36□□□□□ -2.03
HCN3Q9P1Z3 SNRPGP17-201ENST00000603780 214 ntBASIC2.36□□□□□ -2.03
HCN3Q9P1Z3 AL049779.4-201ENST00000604500 156 ntBASIC2.36□□□□□ -2.03
HCN3Q9P1Z3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.36□□□□□ -2.03
HCN3Q9P1Z3 U4.3-201ENST00000621047 82 ntBASIC2.36□□□□□ -2.03
HCN3Q9P1Z3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.36□□□□□ -2.03
HCN3Q9P1Z3 AC243829.7-201ENST00000633081 225 ntBASIC2.36□□□□□ -2.03
HCN3Q9P1Z3 FO624990.1-201ENST00000636373 85 ntBASIC2.36□□□□□ -2.03
HCN3Q9P1Z3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.36□□□□□ -2.03
HCN3Q9P1Z3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HCN3Q9P1Z3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HCN3Q9P1Z3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HCN3Q9P1Z3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 RNU6-99P-201ENST00000364721 107 ntBASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 RNU6-438P-201ENST00000365561 103 ntBASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 RNA5SP270-201ENST00000411361 118 ntBASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 AC007098.1-201ENST00000420122 367 ntBASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 SUMO1P4-201ENST00000429430 302 ntBASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 HMGN2P18-201ENST00000450680 270 ntBASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 AL137159.1-201ENST00000452808 512 ntBASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 MTCO3P8-201ENST00000453691 755 ntBASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 AC007215.1-201ENST00000464893 276 ntBASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 AC093259.1-201ENST00000509755 300 ntBASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 RNA5SP54-201ENST00000516951 92 ntBASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 DEFB131C-201ENST00000528817 165 ntBASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 AC004584.2-201ENST00000570407 410 ntBASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 MIR5701-3-201ENST00000578890 82 ntBASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 MIR5092-201ENST00000583139 88 ntBASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 MIR5701-1-201ENST00000585138 82 ntBASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 AL031274.2-201ENST00000599419 203 ntBASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 RPL17P51-201ENST00000605218 238 ntBASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 MIR1244-1-201ENST00000612829 85 ntBASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 MIR5701-2-201ENST00000615634 82 ntBASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 MIR1244-3-201ENST00000635744 85 ntBASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 MIR1244-2-201ENST00000636449 85 ntBASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 MIR1244-4-202ENST00000636813 85 ntBASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HCN3Q9P1Z3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
HCN3Q9P1Z3 SNORA3A-201ENST00000364113 130 ntBASIC2.34□□□□□ -2.03
HCN3Q9P1Z3 MIR190B-201ENST00000401119 79 ntBASIC2.34□□□□□ -2.03
HCN3Q9P1Z3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HCN3Q9P1Z3 WARS2P1-201ENST00000429678 537 ntBASIC2.34□□□□□ -2.03
HCN3Q9P1Z3 MTND3P23-201ENST00000431980 347 ntBASIC2.34□□□□□ -2.03
HCN3Q9P1Z3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.34□□□□□ -2.03
HCN3Q9P1Z3 AL513328.1-201ENST00000446460 224 ntBASIC2.34□□□□□ -2.03
HCN3Q9P1Z3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.34□□□□□ -2.03
HCN3Q9P1Z3 ATP5EP1-201ENST00000510257 156 ntBASIC2.34□□□□□ -2.03
HCN3Q9P1Z3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.34□□□□□ -2.03
HCN3Q9P1Z3 RNU6-470P-201ENST00000515954 104 ntBASIC2.34□□□□□ -2.03
HCN3Q9P1Z3 SNORA31.11-201ENST00000516528 139 ntBASIC2.34□□□□□ -2.03
HCN3Q9P1Z3 RNU1-104P-201ENST00000517280 175 ntBASIC2.34□□□□□ -2.03
HCN3Q9P1Z3 AC027288.2-201ENST00000553028 243 ntBASIC2.34□□□□□ -2.03
HCN3Q9P1Z3 UBL5P4-201ENST00000562584 236 ntBASIC2.34□□□□□ -2.03
HCN3Q9P1Z3 TCL6_2.1-201ENST00000615162 119 ntBASIC2.34□□□□□ -2.03
HCN3Q9P1Z3 AC104985.2-201ENST00000620598 500 ntBASIC2.34□□□□□ -2.03
HCN3Q9P1Z3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.34□□□□□ -2.03
HCN3Q9P1Z3 AL359697.1-201ENST00000624879 587 ntBASIC2.34□□□□□ -2.03
HCN3Q9P1Z3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
HCN3Q9P1Z3 AC131280.1-202ENST00000624067 4211 ntBASIC2.34□□□□□ -2.04
HCN3Q9P1Z3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
HCN3Q9P1Z3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.33□□□□□ -2.04
HCN3Q9P1Z3 BX322639.1-202ENST00000423987 2213 ntBASIC2.33□□□□□ -2.04
HCN3Q9P1Z3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
HCN3Q9P1Z3 RNU6-222P-201ENST00000362438 107 ntBASIC2.33□□□□□ -2.04
HCN3Q9P1Z3 RNU4-79P-201ENST00000362764 141 ntBASIC2.33□□□□□ -2.04
HCN3Q9P1Z3 Y_RNA.106-201ENST00000363189 100 ntBASIC2.33□□□□□ -2.04
HCN3Q9P1Z3 RNA5SP393-201ENST00000363423 117 ntBASIC2.33□□□□□ -2.04
HCN3Q9P1Z3 RNU1-138P-201ENST00000384093 164 ntBASIC2.33□□□□□ -2.04
HCN3Q9P1Z3 RNA5SP508-201ENST00000411327 119 ntBASIC2.33□□□□□ -2.04
HCN3Q9P1Z3 AC009963.1-201ENST00000417265 157 ntBASIC2.33□□□□□ -2.04
HCN3Q9P1Z3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.33□□□□□ -2.04
HCN3Q9P1Z3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.33□□□□□ -2.04
HCN3Q9P1Z3 ELOCP24-201ENST00000456370 334 ntBASIC2.33□□□□□ -2.04
HCN3Q9P1Z3 MIR2053-201ENST00000459295 91 ntBASIC2.33□□□□□ -2.04
HCN3Q9P1Z3 AP000870.1-201ENST00000472927 406 ntBASIC2.33□□□□□ -2.04
HCN3Q9P1Z3 YWHAEP4-201ENST00000505390 198 ntBASIC2.33□□□□□ -2.04
HCN3Q9P1Z3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.33□□□□□ -2.04
HCN3Q9P1Z3 RNU6-237P-201ENST00000515985 71 ntBASIC2.33□□□□□ -2.04
HCN3Q9P1Z3 SNORA25.14-201ENST00000516481 132 ntBASIC2.33□□□□□ -2.04
HCN3Q9P1Z3 AP002770.2-201ENST00000543613 532 ntBASIC2.33□□□□□ -2.04
HCN3Q9P1Z3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.33□□□□□ -2.04
HCN3Q9P1Z3 PRELID2P1-201ENST00000552837 301 ntBASIC2.33□□□□□ -2.04
HCN3Q9P1Z3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms