Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 DYNLT3P1-201ENST00000378574 347 ntBASIC2.97□□□□□ -1.93
TDP1Q9NUW8 RNU6-926P-201ENST00000384075 107 ntBASIC2.97□□□□□ -1.93
TDP1Q9NUW8 Y_RNA.452-201ENST00000384202 108 ntBASIC2.97□□□□□ -1.93
TDP1Q9NUW8 MIR218-1-201ENST00000384999 110 ntBASIC2.97□□□□□ -1.93
TDP1Q9NUW8 SNORD12B-201ENST00000410433 91 ntBASIC2.97□□□□□ -1.93
TDP1Q9NUW8 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.97□□□□□ -1.93
TDP1Q9NUW8 AC063976.3-201ENST00000426849 329 ntBASIC2.97□□□□□ -1.93
TDP1Q9NUW8 AL731563.1-201ENST00000442202 214 ntBASIC2.97□□□□□ -1.93
TDP1Q9NUW8 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.97□□□□□ -1.93
TDP1Q9NUW8 RNA5SP380-201ENST00000517190 98 ntBASIC2.97□□□□□ -1.93
TDP1Q9NUW8 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.97□□□□□ -1.93
TDP1Q9NUW8 AL161670.1-201ENST00000554348 137 ntBASIC2.97□□□□□ -1.93
TDP1Q9NUW8 MYL12BP1-201ENST00000569826 507 ntBASIC2.97□□□□□ -1.93
TDP1Q9NUW8 MIR3149-201ENST00000584629 83 ntBASIC2.97□□□□□ -1.93
TDP1Q9NUW8 AC130454.1-201ENST00000622948 401 ntBASIC2.97□□□□□ -1.93
TDP1Q9NUW8 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TDP1Q9NUW8 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TDP1Q9NUW8 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
TDP1Q9NUW8 MIR449A-201ENST00000362113 91 ntBASIC2.96□□□□□ -1.94
TDP1Q9NUW8 Y_RNA.19-201ENST00000362462 99 ntBASIC2.96□□□□□ -1.94
TDP1Q9NUW8 Y_RNA.64-201ENST00000362845 102 ntBASIC2.96□□□□□ -1.94
TDP1Q9NUW8 Y_RNA.183-201ENST00000363882 113 ntBASIC2.96□□□□□ -1.94
TDP1Q9NUW8 Y_RNA.222-201ENST00000364264 102 ntBASIC2.96□□□□□ -1.94
TDP1Q9NUW8 Y_RNA.439-201ENST00000384119 94 ntBASIC2.96□□□□□ -1.94
TDP1Q9NUW8 RNU6-1145P-201ENST00000384246 107 ntBASIC2.96□□□□□ -1.94
TDP1Q9NUW8 SNORA12-201ENST00000391162 147 ntBASIC2.96□□□□□ -1.94
TDP1Q9NUW8 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.96□□□□□ -1.94
TDP1Q9NUW8 RPL23AP58-201ENST00000440453 469 ntBASIC2.96□□□□□ -1.94
TDP1Q9NUW8 SCARNA3-201ENST00000517097 143 ntBASIC2.96□□□□□ -1.94
TDP1Q9NUW8 AC023824.2-201ENST00000566185 400 ntBASIC2.96□□□□□ -1.94
TDP1Q9NUW8 MIR3199-1-201ENST00000582434 88 ntBASIC2.96□□□□□ -1.94
TDP1Q9NUW8 AC010999.1-201ENST00000611856 324 ntBASIC2.96□□□□□ -1.94
TDP1Q9NUW8 U4.1-201ENST00000620349 87 ntBASIC2.96□□□□□ -1.94
TDP1Q9NUW8 AC090517.3-201ENST00000625170 141 ntBASIC2.96□□□□□ -1.94
TDP1Q9NUW8 MIR7157-201ENST00000635801 60 ntBASIC2.96□□□□□ -1.94
TDP1Q9NUW8 MAPK10-266ENST00000641066 6555 ntBASIC2.96□□□□□ -1.94
TDP1Q9NUW8 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.95□□□□□ -1.94
TDP1Q9NUW8 AC080128.1-201ENST00000474389 1917 ntBASIC2.95□□□□□ -1.94
TDP1Q9NUW8 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
TDP1Q9NUW8 Y_RNA.105-201ENST00000363182 111 ntBASIC2.95□□□□□ -1.94
TDP1Q9NUW8 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.95□□□□□ -1.94
TDP1Q9NUW8 RNU6-245P-201ENST00000384020 107 ntBASIC2.95□□□□□ -1.94
TDP1Q9NUW8 AL079342.1-201ENST00000401460 267 ntBASIC2.95□□□□□ -1.94
TDP1Q9NUW8 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.95□□□□□ -1.94
TDP1Q9NUW8 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.95□□□□□ -1.94
TDP1Q9NUW8 AC010095.1-201ENST00000443543 144 ntBASIC2.95□□□□□ -1.94
TDP1Q9NUW8 AC108938.1-201ENST00000451204 136 ntBASIC2.95□□□□□ -1.94
TDP1Q9NUW8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.95□□□□□ -1.94
TDP1Q9NUW8 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.95□□□□□ -1.94
TDP1Q9NUW8 AL109933.2-201ENST00000452651 260 ntBASIC2.95□□□□□ -1.94
TDP1Q9NUW8 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.95□□□□□ -1.94
TDP1Q9NUW8 DEFB131C-201ENST00000528817 165 ntBASIC2.95□□□□□ -1.94
TDP1Q9NUW8 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.95□□□□□ -1.94
TDP1Q9NUW8 AC079600.2-201ENST00000550076 130 ntBASIC2.95□□□□□ -1.94
TDP1Q9NUW8 SNRPGP20-201ENST00000604477 205 ntBASIC2.95□□□□□ -1.94
TDP1Q9NUW8 Y_RNA.772-201ENST00000606692 102 ntBASIC2.95□□□□□ -1.94
TDP1Q9NUW8 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.95□□□□□ -1.94
TDP1Q9NUW8 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.95□□□□□ -1.94
TDP1Q9NUW8 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
TDP1Q9NUW8 AL136360.1-201ENST00000503377 1900 ntBASIC2.95□□□□□ -1.94
TDP1Q9NUW8 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
TDP1Q9NUW8 RNU5F-3P-201ENST00000363767 117 ntBASIC2.94□□□□□ -1.94
TDP1Q9NUW8 RNU6-713P-201ENST00000384761 107 ntBASIC2.94□□□□□ -1.94
TDP1Q9NUW8 SNORA46-201ENST00000384762 135 ntBASIC2.94□□□□□ -1.94
TDP1Q9NUW8 MIR29B2-201ENST00000385055 81 ntBASIC2.94□□□□□ -1.94
TDP1Q9NUW8 MRPL35P1-201ENST00000404272 572 ntBASIC2.94□□□□□ -1.94
TDP1Q9NUW8 U6atac.2-201ENST00000408644 118 ntBASIC2.94□□□□□ -1.94
TDP1Q9NUW8 RNU6-121P-201ENST00000410525 99 ntBASIC2.94□□□□□ -1.94
TDP1Q9NUW8 AC027124.2-201ENST00000428249 105 ntBASIC2.94□□□□□ -1.94
TDP1Q9NUW8 LINC01399-202ENST00000458450 244 ntBASIC2.94□□□□□ -1.94
TDP1Q9NUW8 RNU6-1143P-201ENST00000516125 104 ntBASIC2.94□□□□□ -1.94
TDP1Q9NUW8 Y_RNA.713-201ENST00000517013 96 ntBASIC2.94□□□□□ -1.94
TDP1Q9NUW8 HSPE1P18-201ENST00000517602 280 ntBASIC2.94□□□□□ -1.94
TDP1Q9NUW8 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.94□□□□□ -1.94
TDP1Q9NUW8 AC026470.2-201ENST00000561492 181 ntBASIC2.94□□□□□ -1.94
TDP1Q9NUW8 AC004817.2-201ENST00000561794 651 ntBASIC2.94□□□□□ -1.94
TDP1Q9NUW8 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.94□□□□□ -1.94
TDP1Q9NUW8 AL713866.2-201ENST00000603579 219 ntBASIC2.94□□□□□ -1.94
TDP1Q9NUW8 AC005562.2-201ENST00000618264 111 ntBASIC2.94□□□□□ -1.94
TDP1Q9NUW8 MIR8062-201ENST00000621515 85 ntBASIC2.94□□□□□ -1.94
TDP1Q9NUW8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.94□□□□□ -1.94
TDP1Q9NUW8 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TDP1Q9NUW8 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TDP1Q9NUW8 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TDP1Q9NUW8 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
TDP1Q9NUW8 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
TDP1Q9NUW8 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.93□□□□□ -1.94
TDP1Q9NUW8 Y_RNA.179-201ENST00000363844 90 ntBASIC2.93□□□□□ -1.94
TDP1Q9NUW8 Y_RNA.193-201ENST00000363979 102 ntBASIC2.93□□□□□ -1.94
TDP1Q9NUW8 SNORA18.2-201ENST00000383865 132 ntBASIC2.93□□□□□ -1.94
TDP1Q9NUW8 MIR320B2-201ENST00000408479 138 ntBASIC2.93□□□□□ -1.94
TDP1Q9NUW8 AC004866.1-201ENST00000411748 78 ntBASIC2.93□□□□□ -1.94
TDP1Q9NUW8 AC091179.3-201ENST00000474761 144 ntBASIC2.93□□□□□ -1.94
TDP1Q9NUW8 RPL26P26-201ENST00000480251 434 ntBASIC2.93□□□□□ -1.94
TDP1Q9NUW8 AC245166.1-201ENST00000521012 253 ntBASIC2.93□□□□□ -1.94
TDP1Q9NUW8 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.93□□□□□ -1.94
TDP1Q9NUW8 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.93□□□□□ -1.94
TDP1Q9NUW8 AC136932.1-201ENST00000574771 208 ntBASIC2.93□□□□□ -1.94
TDP1Q9NUW8 AC105245.1-201ENST00000581934 244 ntBASIC2.93□□□□□ -1.94
TDP1Q9NUW8 MZT1P2-201ENST00000604387 248 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms