Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 DEFB122-202ENST00000569013 197 ntBASIC2.42□□□□□ -2.02
SMC4Q9NTJ3 MIR4801-201ENST00000582704 82 ntBASIC2.42□□□□□ -2.02
SMC4Q9NTJ3 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.42□□□□□ -2.02
SMC4Q9NTJ3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.42□□□□□ -2.02
SMC4Q9NTJ3 RNU6-845P-201ENST00000362578 103 ntBASIC2.41□□□□□ -2.02
SMC4Q9NTJ3 Y_RNA.72-201ENST00000362894 103 ntBASIC2.41□□□□□ -2.02
SMC4Q9NTJ3 RNU6-767P-201ENST00000384132 107 ntBASIC2.41□□□□□ -2.02
SMC4Q9NTJ3 RNU6-378P-201ENST00000384324 107 ntBASIC2.41□□□□□ -2.02
SMC4Q9NTJ3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SMC4Q9NTJ3 MIR1283-2-201ENST00000408621 87 ntBASIC2.41□□□□□ -2.02
SMC4Q9NTJ3 RPL21P111-201ENST00000418453 477 ntBASIC2.41□□□□□ -2.02
SMC4Q9NTJ3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.41□□□□□ -2.02
SMC4Q9NTJ3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.41□□□□□ -2.02
SMC4Q9NTJ3 MTND1P17-201ENST00000448961 204 ntBASIC2.41□□□□□ -2.02
SMC4Q9NTJ3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.41□□□□□ -2.02
SMC4Q9NTJ3 HMGN1P12-201ENST00000499125 195 ntBASIC2.41□□□□□ -2.02
SMC4Q9NTJ3 MTND5P5-201ENST00000503764 376 ntBASIC2.41□□□□□ -2.02
SMC4Q9NTJ3 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.41□□□□□ -2.02
SMC4Q9NTJ3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.41□□□□□ -2.02
SMC4Q9NTJ3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.41□□□□□ -2.02
SMC4Q9NTJ3 AC109446.1-201ENST00000566172 220 ntBASIC2.41□□□□□ -2.02
SMC4Q9NTJ3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.41□□□□□ -2.02
SMC4Q9NTJ3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.41□□□□□ -2.02
SMC4Q9NTJ3 SNORD50.1-201ENST00000362987 71 ntBASIC2.4□□□□□ -2.03
SMC4Q9NTJ3 RNU5B-2P-201ENST00000363036 113 ntBASIC2.4□□□□□ -2.03
SMC4Q9NTJ3 RNU6-743P-201ENST00000364151 106 ntBASIC2.4□□□□□ -2.03
SMC4Q9NTJ3 Y_RNA.332-201ENST00000365271 113 ntBASIC2.4□□□□□ -2.03
SMC4Q9NTJ3 SNORA29-201ENST00000384183 140 ntBASIC2.4□□□□□ -2.03
SMC4Q9NTJ3 RNU6-790P-201ENST00000384479 105 ntBASIC2.4□□□□□ -2.03
SMC4Q9NTJ3 MIR208B-201ENST00000401172 77 ntBASIC2.4□□□□□ -2.03
SMC4Q9NTJ3 PCMTD1P1-201ENST00000455560 355 ntBASIC2.4□□□□□ -2.03
SMC4Q9NTJ3 RPL23AP42-201ENST00000471152 471 ntBASIC2.4□□□□□ -2.03
SMC4Q9NTJ3 RNA5SP182-201ENST00000516064 82 ntBASIC2.4□□□□□ -2.03
SMC4Q9NTJ3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.4□□□□□ -2.03
SMC4Q9NTJ3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.4□□□□□ -2.03
SMC4Q9NTJ3 AC110588.1-201ENST00000559699 137 ntBASIC2.4□□□□□ -2.03
SMC4Q9NTJ3 MIR4790-201ENST00000577799 79 ntBASIC2.4□□□□□ -2.03
SMC4Q9NTJ3 MIR3935-201ENST00000583472 104 ntBASIC2.4□□□□□ -2.03
SMC4Q9NTJ3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.4□□□□□ -2.03
SMC4Q9NTJ3 AC019193.3-201ENST00000609144 554 ntBASIC2.4□□□□□ -2.03
SMC4Q9NTJ3 AC009318.2-201ENST00000610917 651 ntBASIC2.4□□□□□ -2.03
SMC4Q9NTJ3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.4□□□□□ -2.03
SMC4Q9NTJ3 AC009487.4-201ENST00000624969 3585 ntBASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 RNU6-1164P-201ENST00000364428 107 ntBASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 SNORD81.2-201ENST00000365153 76 ntBASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 Y_RNA.339-201ENST00000365325 102 ntBASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 RNU6-1013P-201ENST00000384180 107 ntBASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 MIR17-201ENST00000385012 84 ntBASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 MIR548F5-201ENST00000408421 86 ntBASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 AL445685.2-201ENST00000422551 342 ntBASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 snoU13.6-201ENST00000458785 104 ntBASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 AC103851.1-201ENST00000506833 274 ntBASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 MIR449C-201ENST00000516047 92 ntBASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 RNU6-991P-201ENST00000516168 107 ntBASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 RNA5SP364-201ENST00000516938 78 ntBASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 RNA5SP490-201ENST00000517141 136 ntBASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 AC015712.3-201ENST00000559380 164 ntBASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 RBM11P1-201ENST00000604951 799 ntBASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 MIR6128-201ENST00000615528 109 ntBASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 AC022306.2-201ENST00000617563 647 ntBASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SMC4Q9NTJ3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
SMC4Q9NTJ3 RNU1-58P-201ENST00000362413 163 ntBASIC2.38□□□□□ -2.03
SMC4Q9NTJ3 RNU6-968P-201ENST00000384076 107 ntBASIC2.38□□□□□ -2.03
SMC4Q9NTJ3 AL512604.1-201ENST00000404812 257 ntBASIC2.38□□□□□ -2.03
SMC4Q9NTJ3 MIR1289-2-201ENST00000408360 111 ntBASIC2.38□□□□□ -2.03
SMC4Q9NTJ3 MIR548K-201ENST00000408406 116 ntBASIC2.38□□□□□ -2.03
SMC4Q9NTJ3 RNU4-14P-201ENST00000410858 122 ntBASIC2.38□□□□□ -2.03
SMC4Q9NTJ3 USP9YP30-201ENST00000430729 455 ntBASIC2.38□□□□□ -2.03
SMC4Q9NTJ3 DAP3P1-201ENST00000441522 278 ntBASIC2.38□□□□□ -2.03
SMC4Q9NTJ3 MTND4P17-201ENST00000470444 350 ntBASIC2.38□□□□□ -2.03
SMC4Q9NTJ3 FO393415.2-201ENST00000480085 343 ntBASIC2.38□□□□□ -2.03
SMC4Q9NTJ3 AC108210.2-201ENST00000503681 201 ntBASIC2.38□□□□□ -2.03
SMC4Q9NTJ3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.38□□□□□ -2.03
SMC4Q9NTJ3 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.38□□□□□ -2.03
SMC4Q9NTJ3 AC087441.2-201ENST00000529141 262 ntBASIC2.38□□□□□ -2.03
SMC4Q9NTJ3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
SMC4Q9NTJ3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SMC4Q9NTJ3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SMC4Q9NTJ3 RNU1-76P-201ENST00000362903 159 ntBASIC2.37□□□□□ -2.03
SMC4Q9NTJ3 RNY3P14-201ENST00000384309 102 ntBASIC2.37□□□□□ -2.03
SMC4Q9NTJ3 MIR487A-201ENST00000385009 80 ntBASIC2.37□□□□□ -2.03
SMC4Q9NTJ3 AL591806.2-201ENST00000433122 173 ntBASIC2.37□□□□□ -2.03
SMC4Q9NTJ3 HMGN2P3-201ENST00000433603 273 ntBASIC2.37□□□□□ -2.03
SMC4Q9NTJ3 HMGN2P5-201ENST00000436882 273 ntBASIC2.37□□□□□ -2.03
SMC4Q9NTJ3 HMGB1P18-201ENST00000438801 619 ntBASIC2.37□□□□□ -2.03
SMC4Q9NTJ3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.37□□□□□ -2.03
SMC4Q9NTJ3 HMGN2P18-201ENST00000450680 270 ntBASIC2.37□□□□□ -2.03
SMC4Q9NTJ3 AC046134.1-201ENST00000514454 666 ntBASIC2.37□□□□□ -2.03
SMC4Q9NTJ3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.37□□□□□ -2.03
SMC4Q9NTJ3 ANP32BP3-201ENST00000559213 706 ntBASIC2.37□□□□□ -2.03
SMC4Q9NTJ3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.37□□□□□ -2.03
SMC4Q9NTJ3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.37□□□□□ -2.03
SMC4Q9NTJ3 AL109918.3-201ENST00000603072 338 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 179.1 ms