Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 MTCO2P3-201ENST00000442543 421 ntBASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 EPS15P1-201ENST00000448836 336 ntBASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 USP9YP12-201ENST00000450481 570 ntBASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 AL163540.1-201ENST00000485382 386 ntBASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 RNU6-410P-201ENST00000517006 107 ntBASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 AC007834.2-201ENST00000536310 343 ntBASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 MTND4P33-201ENST00000556706 766 ntBASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 MIR4698-201ENST00000577795 80 ntBASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 MIR3158-1-201ENST00000583596 81 ntBASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 AL162424.1-201ENST00000602325 221 ntBASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 AC009318.2-201ENST00000610917 651 ntBASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 AL157834.3-201ENST00000615543 103 ntBASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 MIR6835-201ENST00000621552 64 ntBASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 AC244015.1-201ENST00000622301 99 ntBASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 AP000568.1-201ENST00000282964 442 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 RNU6-1305P-201ENST00000364353 104 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 5S_rRNA.1-201ENST00000364415 116 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 RNU6-1240P-201ENST00000365155 104 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 Y_RNA.399-201ENST00000383955 105 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 U8.10-201ENST00000384260 133 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 RNU6-424P-201ENST00000384367 105 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 MIR141-201ENST00000384975 95 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 AL445305.1-201ENST00000432577 575 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 AC009220.1-201ENST00000451614 275 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 RNU7-182P-201ENST00000459009 62 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 SNORD13-201ENST00000459299 104 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 AC022493.2-201ENST00000506122 481 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 Vault.3-201ENST00000516676 95 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 RNU6-295P-201ENST00000516901 104 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 AC106038.2-201ENST00000520706 568 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 AP003716.2-201ENST00000528260 108 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 MIR4648-201ENST00000580107 72 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 MIR5010-201ENST00000582846 120 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 AC098848.2-201ENST00000588023 330 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 RSL24D1P11-201ENST00000591045 491 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 BNIP3P39-201ENST00000601077 554 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 AC096577.2-201ENST00000611455 153 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 U6.73-201ENST00000619194 103 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 AC009541.1-201ENST00000438279 2662 ntBASIC0.21□□□□□ -2.38
CDC42SE1Q9NRR8 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 SNORA7.1-201ENST00000363750 139 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 RNU6-1237P-201ENST00000384777 107 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 U8.13-201ENST00000390842 128 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 RPS3AP3-201ENST00000411933 242 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 AL008987.1-201ENST00000415528 237 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 AC008134.1-201ENST00000420943 193 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 AL354692.1-201ENST00000423044 315 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 AC244098.3-201ENST00000424803 96 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 AC004941.2-201ENST00000427009 228 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 MTCO2P12-201ENST00000427426 682 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 CALM2P4-201ENST00000430810 426 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 DAP3P1-201ENST00000441522 278 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 AC079781.2-201ENST00000446424 169 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 AL009048.1-201ENST00000450437 298 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 RPL39P39-201ENST00000455840 151 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 AC022364.2-201ENST00000457963 554 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 RN7SKP210-201ENST00000459176 261 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 U7.7-201ENST00000459276 60 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 AC002350.1-201ENST00000490759 375 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 AC079140.5-201ENST00000507882 310 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 RPL39P5-202ENST00000512505 151 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 AC010493.1-201ENST00000513479 292 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 RN7SKP12-201ENST00000516275 143 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 MTND4LP26-201ENST00000518144 282 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 MIR4703-201ENST00000577728 79 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 MIR3162-201ENST00000581818 82 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 AP000907.4-201ENST00000604143 237 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 AL158050.2-201ENST00000605336 568 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 AL512598.1-201ENST00000610158 273 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 AL360219.1-201ENST00000610230 366 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 AL133173.2-201ENST00000614270 90 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 MIR7844-201ENST00000616161 122 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 AC064859.1-201ENST00000624741 174 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 MIR6516-201ENST00000630554 81 ntBASIC0.2□□□□□ -2.38
CDC42SE1Q9NRR8 AC007671.2-201ENST00000637344 619 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms