Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 POLR2J4-204ENST00000418424 324 ntBASIC0.67□□□□□ -2.3
UBQLN4Q9NRR5 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.67□□□□□ -2.3
UBQLN4Q9NRR5 AC079781.2-201ENST00000446424 169 ntBASIC0.67□□□□□ -2.3
UBQLN4Q9NRR5 SNORD124-201ENST00000459577 104 ntBASIC0.67□□□□□ -2.3
UBQLN4Q9NRR5 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.67□□□□□ -2.3
UBQLN4Q9NRR5 RNU6-1146P-201ENST00000516282 102 ntBASIC0.67□□□□□ -2.3
UBQLN4Q9NRR5 RNU6-948P-201ENST00000516374 107 ntBASIC0.67□□□□□ -2.3
UBQLN4Q9NRR5 RNU2-34P-201ENST00000516534 121 ntBASIC0.67□□□□□ -2.3
UBQLN4Q9NRR5 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.67□□□□□ -2.3
UBQLN4Q9NRR5 MIR4775-201ENST00000581168 75 ntBASIC0.67□□□□□ -2.3
UBQLN4Q9NRR5 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.67□□□□□ -2.3
UBQLN4Q9NRR5 MIR548AB-201ENST00000584917 84 ntBASIC0.67□□□□□ -2.3
UBQLN4Q9NRR5 FAM106DP-201ENST00000586416 501 ntBASIC0.67□□□□□ -2.3
UBQLN4Q9NRR5 AC064872.1-201ENST00000604823 1072 ntBASIC0.67□□□□□ -2.3
UBQLN4Q9NRR5 MIR7844-201ENST00000616161 122 ntBASIC0.67□□□□□ -2.3
UBQLN4Q9NRR5 AC106754.2-201ENST00000623006 233 ntBASIC0.67□□□□□ -2.3
UBQLN4Q9NRR5 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 AC009541.1-201ENST00000438279 2662 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 HSBP1P2-201ENST00000299671 229 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 RNU6-266P-201ENST00000364225 107 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 MIR1-2-201ENST00000384961 85 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 MIR100-201ENST00000385259 80 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 MIR454-201ENST00000390180 115 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 RNA5SP467-201ENST00000391274 118 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 AC006461.1-201ENST00000412637 326 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 AC106883.1-201ENST00000418805 562 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 LRRC34P2-201ENST00000514850 553 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 RNU2-69P-201ENST00000516061 100 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 RNU6-1069P-201ENST00000516612 133 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 RNU6-922P-201ENST00000516753 99 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 SNORA25.17-201ENST00000517184 124 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 TPRKBP2-201ENST00000565969 475 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 MIR4742-201ENST00000581069 85 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 AC016727.2-201ENST00000603988 621 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 MIR98-201ENST00000606724 119 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 AC097065.2-201ENST00000608159 533 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 AC106800.4-201ENST00000614905 153 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 AC005562.2-201ENST00000618264 111 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
UBQLN4Q9NRR5 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
UBQLN4Q9NRR5 SNORA25.9-201ENST00000365087 128 ntBASIC0.65□□□□□ -2.31
UBQLN4Q9NRR5 RNU6-1235P-201ENST00000384559 107 ntBASIC0.65□□□□□ -2.31
UBQLN4Q9NRR5 PIGFP2-201ENST00000421400 651 ntBASIC0.65□□□□□ -2.31
UBQLN4Q9NRR5 AC011233.1-201ENST00000422812 283 ntBASIC0.65□□□□□ -2.31
UBQLN4Q9NRR5 AL606490.4-201ENST00000423117 127 ntBASIC0.65□□□□□ -2.31
UBQLN4Q9NRR5 AC004386.2-201ENST00000441858 148 ntBASIC0.65□□□□□ -2.31
UBQLN4Q9NRR5 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.65□□□□□ -2.31
UBQLN4Q9NRR5 RNU6-498P-201ENST00000459468 107 ntBASIC0.65□□□□□ -2.31
UBQLN4Q9NRR5 RPL39P38-201ENST00000467018 153 ntBASIC0.65□□□□□ -2.31
UBQLN4Q9NRR5 AC048334.1-201ENST00000477975 159 ntBASIC0.65□□□□□ -2.31
UBQLN4Q9NRR5 PDCD5P2-201ENST00000507570 312 ntBASIC0.65□□□□□ -2.31
UBQLN4Q9NRR5 SNORA31.4-201ENST00000516049 129 ntBASIC0.65□□□□□ -2.31
UBQLN4Q9NRR5 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.65□□□□□ -2.31
UBQLN4Q9NRR5 MTND1P8-201ENST00000571424 950 ntBASIC0.65□□□□□ -2.31
UBQLN4Q9NRR5 AC068790.6-201ENST00000602558 258 ntBASIC0.65□□□□□ -2.31
UBQLN4Q9NRR5 AC104458.1-201ENST00000608243 463 ntBASIC0.65□□□□□ -2.31
UBQLN4Q9NRR5 AC009509.4-201ENST00000619202 509 ntBASIC0.65□□□□□ -2.31
UBQLN4Q9NRR5 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.65□□□□□ -2.31
UBQLN4Q9NRR5 AC008163.1-202ENST00000636004 2889 ntBASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 RNU4-79P-201ENST00000362764 141 ntBASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 Y_RNA.191-201ENST00000363972 113 ntBASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 RNU6-950P-201ENST00000384651 107 ntBASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 MIR520E-201ENST00000384867 87 ntBASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 SNORA16.2-201ENST00000390991 127 ntBASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 AC063976.4-201ENST00000421971 163 ntBASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 TIMM9P3-201ENST00000428659 274 ntBASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 AL606517.2-201ENST00000442855 241 ntBASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 AC092991.1-201ENST00000477176 376 ntBASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 RNU6-947P-201ENST00000516264 106 ntBASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 RNA5SP168-201ENST00000516642 112 ntBASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 AC069113.1-201ENST00000517763 267 ntBASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 AC025423.5-201ENST00000550230 219 ntBASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 AC008751.2-201ENST00000597885 980 ntBASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 AL391834.2-201ENST00000609982 546 ntBASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.64□□□□□ -2.31
UBQLN4Q9NRR5 Y_RNA.287-201ENST00000364853 94 ntBASIC0.63□□□□□ -2.31
UBQLN4Q9NRR5 RNU6-74P-201ENST00000384235 107 ntBASIC0.63□□□□□ -2.31
UBQLN4Q9NRR5 RNU6-975P-201ENST00000384296 105 ntBASIC0.63□□□□□ -2.31
UBQLN4Q9NRR5 RNU6-1031P-201ENST00000384773 107 ntBASIC0.63□□□□□ -2.31
UBQLN4Q9NRR5 RNU2-64P-201ENST00000411315 191 ntBASIC0.63□□□□□ -2.31
UBQLN4Q9NRR5 RNU6-57P-201ENST00000411348 103 ntBASIC0.63□□□□□ -2.31
UBQLN4Q9NRR5 RPS3AP3-201ENST00000411933 242 ntBASIC0.63□□□□□ -2.31
UBQLN4Q9NRR5 RAB28P5-201ENST00000427490 651 ntBASIC0.63□□□□□ -2.31
UBQLN4Q9NRR5 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.63□□□□□ -2.31
UBQLN4Q9NRR5 RPL31P35-201ENST00000431058 377 ntBASIC0.63□□□□□ -2.31
UBQLN4Q9NRR5 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.63□□□□□ -2.31
UBQLN4Q9NRR5 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.63□□□□□ -2.31
UBQLN4Q9NRR5 SCARNA18-201ENST00000459004 134 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms