Protein–RNA interactions for Protein: Q9NQ69

LHX9, LIM/homeobox protein Lhx9, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9Q9NQ69 AC078809.1-201ENST00000427601 140 ntBASIC1.45□□□□□ -2.18
LHX9Q9NQ69 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.45□□□□□ -2.18
LHX9Q9NQ69 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.45□□□□□ -2.18
LHX9Q9NQ69 PRELID3BP1-201ENST00000457142 540 ntBASIC1.45□□□□□ -2.18
LHX9Q9NQ69 RPS29P25-201ENST00000481709 171 ntBASIC1.45□□□□□ -2.18
LHX9Q9NQ69 AC069439.1-201ENST00000494739 167 ntBASIC1.45□□□□□ -2.18
LHX9Q9NQ69 AC022447.4-201ENST00000504053 364 ntBASIC1.45□□□□□ -2.18
LHX9Q9NQ69 RNU6-256P-201ENST00000516747 97 ntBASIC1.45□□□□□ -2.18
LHX9Q9NQ69 RNU6-1314P-201ENST00000517139 104 ntBASIC1.45□□□□□ -2.18
LHX9Q9NQ69 SNORA31.24-201ENST00000517232 57 ntBASIC1.45□□□□□ -2.18
LHX9Q9NQ69 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.45□□□□□ -2.18
LHX9Q9NQ69 MRPS36P4-201ENST00000534436 298 ntBASIC1.45□□□□□ -2.18
LHX9Q9NQ69 NDUFA5P6-201ENST00000542110 379 ntBASIC1.45□□□□□ -2.18
LHX9Q9NQ69 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.45□□□□□ -2.18
LHX9Q9NQ69 AC109446.1-201ENST00000566172 220 ntBASIC1.45□□□□□ -2.18
LHX9Q9NQ69 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.45□□□□□ -2.18
LHX9Q9NQ69 MIR3136-201ENST00000583498 78 ntBASIC1.45□□□□□ -2.18
LHX9Q9NQ69 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.45□□□□□ -2.18
LHX9Q9NQ69 Z98751.3-201ENST00000604447 521 ntBASIC1.45□□□□□ -2.18
LHX9Q9NQ69 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.45□□□□□ -2.18
LHX9Q9NQ69 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.45□□□□□ -2.18
LHX9Q9NQ69 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
LHX9Q9NQ69 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
LHX9Q9NQ69 AP000560.1-201ENST00000624150 1937 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 AL391987.6-201ENST00000305671 199 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 AC092268.1-201ENST00000342691 405 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 RNU4-13P-201ENST00000364019 141 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 SNORD32B-201ENST00000364460 84 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 Y_RNA.414-201ENST00000384011 101 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 RNU6-378P-201ENST00000384324 107 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 RNU6-95P-201ENST00000384697 107 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 SNORA26.3-201ENST00000391119 136 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 Y_RNA.619-201ENST00000410951 90 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 RNU6-373P-201ENST00000411247 98 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 AC004965.1-201ENST00000413033 213 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 UBE2V1P4-201ENST00000425374 344 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 NFU1P2-201ENST00000448700 469 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.44□□□□□ -2.18
LHX9Q9NQ69 AL137159.1-201ENST00000452808 512 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 MTND1P11-201ENST00000456661 876 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 U8.21-201ENST00000459536 136 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 AC107032.1-201ENST00000485945 480 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 AC082651.2-201ENST00000496833 166 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 TRBVA-201ENST00000498804 316 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.44□□□□□ -2.18
LHX9Q9NQ69 AC096745.1-201ENST00000509945 370 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 SNORA31.25-201ENST00000517242 134 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.44□□□□□ -2.18
LHX9Q9NQ69 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.44□□□□□ -2.18
LHX9Q9NQ69 AC100830.2-201ENST00000581636 240 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 AC080078.2-201ENST00000603766 501 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 AC084782.3-201ENST00000612282 578 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 AL138726.1-201ENST00000614873 333 ntBASIC1.44□□□□□ -2.18
LHX9Q9NQ69 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
LHX9Q9NQ69 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.44□□□□□ -2.18
LHX9Q9NQ69 ZNF209P-201ENST00000593450 2304 ntBASIC1.43□□□□□ -2.18
LHX9Q9NQ69 Y_RNA.212-201ENST00000364177 102 ntBASIC1.43□□□□□ -2.18
LHX9Q9NQ69 Y_RNA.226-201ENST00000364337 114 ntBASIC1.43□□□□□ -2.18
LHX9Q9NQ69 RNU6-831P-201ENST00000384548 107 ntBASIC1.43□□□□□ -2.18
LHX9Q9NQ69 HMGN2P39-201ENST00000398005 273 ntBASIC1.43□□□□□ -2.18
LHX9Q9NQ69 MIR1277-201ENST00000408536 78 ntBASIC1.43□□□□□ -2.18
LHX9Q9NQ69 RNA5SP201-201ENST00000410316 124 ntBASIC1.43□□□□□ -2.18
LHX9Q9NQ69 AL353689.1-201ENST00000438895 199 ntBASIC1.43□□□□□ -2.18
LHX9Q9NQ69 MTCO1P29-201ENST00000496868 288 ntBASIC1.43□□□□□ -2.18
LHX9Q9NQ69 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.43□□□□□ -2.18
LHX9Q9NQ69 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.43□□□□□ -2.18
LHX9Q9NQ69 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.43□□□□□ -2.18
LHX9Q9NQ69 AC005741.1-201ENST00000511094 432 ntBASIC1.43□□□□□ -2.18
LHX9Q9NQ69 PTP4A1P4-201ENST00000512479 322 ntBASIC1.43□□□□□ -2.18
LHX9Q9NQ69 RNU1-92P-201ENST00000517017 135 ntBASIC1.43□□□□□ -2.18
LHX9Q9NQ69 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.43□□□□□ -2.18
LHX9Q9NQ69 AC018630.3-201ENST00000542637 96 ntBASIC1.43□□□□□ -2.18
LHX9Q9NQ69 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.43□□□□□ -2.18
LHX9Q9NQ69 AL161670.1-201ENST00000554348 137 ntBASIC1.43□□□□□ -2.18
LHX9Q9NQ69 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.43□□□□□ -2.18
LHX9Q9NQ69 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.43□□□□□ -2.18
LHX9Q9NQ69 MIR3923-201ENST00000579521 83 ntBASIC1.43□□□□□ -2.18
LHX9Q9NQ69 AL356157.2-201ENST00000605122 111 ntBASIC1.43□□□□□ -2.18
LHX9Q9NQ69 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
LHX9Q9NQ69 AL136221.1-201ENST00000621449 509 ntBASIC1.43□□□□□ -2.18
LHX9Q9NQ69 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.43□□□□□ -2.18
LHX9Q9NQ69 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.43□□□□□ -2.18
LHX9Q9NQ69 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LHX9Q9NQ69 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LHX9Q9NQ69 RNU6-562P-201ENST00000362731 107 ntBASIC1.42□□□□□ -2.18
LHX9Q9NQ69 Y_RNA.86-201ENST00000363020 111 ntBASIC1.42□□□□□ -2.18
LHX9Q9NQ69 RNU4-56P-201ENST00000364700 142 ntBASIC1.42□□□□□ -2.18
LHX9Q9NQ69 RNU6-128P-201ENST00000383976 107 ntBASIC1.42□□□□□ -2.18
LHX9Q9NQ69 SNORA29-201ENST00000384183 140 ntBASIC1.42□□□□□ -2.18
LHX9Q9NQ69 RNU6-611P-201ENST00000384276 104 ntBASIC1.42□□□□□ -2.18
LHX9Q9NQ69 RNU6-933P-201ENST00000384424 107 ntBASIC1.42□□□□□ -2.18
LHX9Q9NQ69 RNU6-790P-201ENST00000384479 105 ntBASIC1.42□□□□□ -2.18
LHX9Q9NQ69 RNU6-306P-201ENST00000384617 107 ntBASIC1.42□□□□□ -2.18
LHX9Q9NQ69 MIR549A-201ENST00000385268 96 ntBASIC1.42□□□□□ -2.18
LHX9Q9NQ69 MIR208B-201ENST00000401172 77 ntBASIC1.42□□□□□ -2.18
LHX9Q9NQ69 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.42□□□□□ -2.18
LHX9Q9NQ69 MTCYBP2-201ENST00000407745 171 ntBASIC1.42□□□□□ -2.18
LHX9Q9NQ69 Y_RNA.599-201ENST00000410489 109 ntBASIC1.42□□□□□ -2.18
LHX9Q9NQ69 EIF1P1-201ENST00000421436 341 ntBASIC1.42□□□□□ -2.18
LHX9Q9NQ69 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms