Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AP005660.1-201ENST00000522972 293 ntBASIC3.36□□□□□ -1.87
CD248Q9HCU0 EIF4BP1-201ENST00000554881 351 ntBASIC3.36□□□□□ -1.87
CD248Q9HCU0 MIR4782-201ENST00000577987 79 ntBASIC3.36□□□□□ -1.87
CD248Q9HCU0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.36□□□□□ -1.87
CD248Q9HCU0 AL137843.1-201ENST00000605078 385 ntBASIC3.36□□□□□ -1.87
CD248Q9HCU0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.36□□□□□ -1.87
CD248Q9HCU0 AC006001.4-201ENST00000622243 395 ntBASIC3.36□□□□□ -1.87
CD248Q9HCU0 MTND1P7-201ENST00000632801 297 ntBASIC3.36□□□□□ -1.87
CD248Q9HCU0 AC110079.1-202ENST00000635213 138 ntBASIC3.36□□□□□ -1.87
CD248Q9HCU0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CD248Q9HCU0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CD248Q9HCU0 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CD248Q9HCU0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CD248Q9HCU0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
CD248Q9HCU0 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.35□□□□□ -1.87
CD248Q9HCU0 AC093908.1-201ENST00000623125 8092 ntBASIC3.35□□□□□ -1.87
CD248Q9HCU0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CD248Q9HCU0 Y_RNA.136-201ENST00000363444 102 ntBASIC3.35□□□□□ -1.87
CD248Q9HCU0 RNU6-1175P-201ENST00000365200 107 ntBASIC3.35□□□□□ -1.87
CD248Q9HCU0 Y_RNA.343-201ENST00000365354 112 ntBASIC3.35□□□□□ -1.87
CD248Q9HCU0 RNU6-741P-201ENST00000383889 107 ntBASIC3.35□□□□□ -1.87
CD248Q9HCU0 SNORD21-201ENST00000383953 95 ntBASIC3.35□□□□□ -1.87
CD248Q9HCU0 SNORD116-18-201ENST00000383961 92 ntBASIC3.35□□□□□ -1.87
CD248Q9HCU0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CD248Q9HCU0 RNU6-1154P-201ENST00000391001 104 ntBASIC3.35□□□□□ -1.87
CD248Q9HCU0 RNA5SP354-201ENST00000391247 136 ntBASIC3.35□□□□□ -1.87
CD248Q9HCU0 UQCRBP2-201ENST00000447827 297 ntBASIC3.35□□□□□ -1.87
CD248Q9HCU0 MRPS10P1-201ENST00000448483 130 ntBASIC3.35□□□□□ -1.87
CD248Q9HCU0 AC107934.2-201ENST00000518653 310 ntBASIC3.35□□□□□ -1.87
CD248Q9HCU0 MIR5695-201ENST00000579717 85 ntBASIC3.35□□□□□ -1.87
CD248Q9HCU0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.35□□□□□ -1.87
CD248Q9HCU0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.35□□□□□ -1.87
CD248Q9HCU0 U6.99-201ENST00000637524 83 ntBASIC3.35□□□□□ -1.87
CD248Q9HCU0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CD248Q9HCU0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CD248Q9HCU0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CD248Q9HCU0 Y_RNA.230-201ENST00000364348 109 ntBASIC3.34□□□□□ -1.87
CD248Q9HCU0 Y_RNA.262-201ENST00000364641 102 ntBASIC3.34□□□□□ -1.87
CD248Q9HCU0 SNORA51.4-201ENST00000364993 124 ntBASIC3.34□□□□□ -1.87
CD248Q9HCU0 Y_RNA.497-201ENST00000384447 98 ntBASIC3.34□□□□□ -1.87
CD248Q9HCU0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CD248Q9HCU0 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.34□□□□□ -1.87
CD248Q9HCU0 Y_RNA.597-201ENST00000410463 100 ntBASIC3.34□□□□□ -1.87
CD248Q9HCU0 RNA5SP492-201ENST00000411330 114 ntBASIC3.34□□□□□ -1.87
CD248Q9HCU0 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.34□□□□□ -1.87
CD248Q9HCU0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CD248Q9HCU0 AC006028.1-201ENST00000438379 402 ntBASIC3.34□□□□□ -1.87
CD248Q9HCU0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.34□□□□□ -1.87
CD248Q9HCU0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.34□□□□□ -1.87
CD248Q9HCU0 AC006026.2-201ENST00000457376 180 ntBASIC3.34□□□□□ -1.87
CD248Q9HCU0 RPL27AP5-201ENST00000469428 449 ntBASIC3.34□□□□□ -1.87
CD248Q9HCU0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.34□□□□□ -1.87
CD248Q9HCU0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.34□□□□□ -1.87
CD248Q9HCU0 AL162713.1-201ENST00000604480 262 ntBASIC3.34□□□□□ -1.87
CD248Q9HCU0 AC005828.6-201ENST00000606610 232 ntBASIC3.34□□□□□ -1.87
CD248Q9HCU0 AC091895.1-201ENST00000624494 256 ntBASIC3.34□□□□□ -1.87
CD248Q9HCU0 AC073476.4-201ENST00000628409 72 ntBASIC3.34□□□□□ -1.87
CD248Q9HCU0 AC026241.1-201ENST00000517873 2142 ntBASIC3.34□□□□□ -1.88
CD248Q9HCU0 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CD248Q9HCU0 AL035425.3-201ENST00000564206 4996 ntBASIC3.33□□□□□ -1.88
CD248Q9HCU0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CD248Q9HCU0 RNU1-70P-201ENST00000362618 164 ntBASIC3.33□□□□□ -1.88
CD248Q9HCU0 RNU6-961P-201ENST00000363893 105 ntBASIC3.33□□□□□ -1.88
CD248Q9HCU0 Y_RNA.272-201ENST00000364696 102 ntBASIC3.33□□□□□ -1.88
CD248Q9HCU0 Y_RNA.319-201ENST00000365138 92 ntBASIC3.33□□□□□ -1.88
CD248Q9HCU0 Y_RNA.331-201ENST00000365267 102 ntBASIC3.33□□□□□ -1.88
CD248Q9HCU0 RNU6-1130P-201ENST00000365434 107 ntBASIC3.33□□□□□ -1.88
CD248Q9HCU0 MIR10B-201ENST00000385011 110 ntBASIC3.33□□□□□ -1.88
CD248Q9HCU0 Y_RNA.580-201ENST00000391004 95 ntBASIC3.33□□□□□ -1.88
CD248Q9HCU0 SNORA11.2-201ENST00000408318 127 ntBASIC3.33□□□□□ -1.88
CD248Q9HCU0 U3.37-201ENST00000408528 213 ntBASIC3.33□□□□□ -1.88
CD248Q9HCU0 RNA5SP344-201ENST00000411081 104 ntBASIC3.33□□□□□ -1.88
CD248Q9HCU0 AC024067.1-201ENST00000426199 223 ntBASIC3.33□□□□□ -1.88
CD248Q9HCU0 WARS2P1-201ENST00000429678 537 ntBASIC3.33□□□□□ -1.88
CD248Q9HCU0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.33□□□□□ -1.88
CD248Q9HCU0 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.33□□□□□ -1.88
CD248Q9HCU0 SNORA40.9-201ENST00000515895 93 ntBASIC3.33□□□□□ -1.88
CD248Q9HCU0 SNORA43.2-201ENST00000516652 128 ntBASIC3.33□□□□□ -1.88
CD248Q9HCU0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.33□□□□□ -1.88
CD248Q9HCU0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.33□□□□□ -1.88
CD248Q9HCU0 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.33□□□□□ -1.88
CD248Q9HCU0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.33□□□□□ -1.88
CD248Q9HCU0 AC008739.2-201ENST00000597006 317 ntBASIC3.33□□□□□ -1.88
CD248Q9HCU0 AC024153.1-201ENST00000603103 365 ntBASIC3.33□□□□□ -1.88
CD248Q9HCU0 AC090132.2-201ENST00000615881 347 ntBASIC3.33□□□□□ -1.88
CD248Q9HCU0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.33□□□□□ -1.88
CD248Q9HCU0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CD248Q9HCU0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.32□□□□□ -1.88
CD248Q9HCU0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.32□□□□□ -1.88
CD248Q9HCU0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CD248Q9HCU0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.32□□□□□ -1.88
CD248Q9HCU0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CD248Q9HCU0 SNORD56.5-201ENST00000364281 72 ntBASIC3.32□□□□□ -1.88
CD248Q9HCU0 SNORA29-201ENST00000384183 140 ntBASIC3.32□□□□□ -1.88
CD248Q9HCU0 RNU6-281P-201ENST00000384212 103 ntBASIC3.32□□□□□ -1.88
CD248Q9HCU0 RNU6-1245P-201ENST00000411130 106 ntBASIC3.32□□□□□ -1.88
CD248Q9HCU0 RNU5E-9P-201ENST00000411164 104 ntBASIC3.32□□□□□ -1.88
CD248Q9HCU0 RNU6-1001P-201ENST00000411265 100 ntBASIC3.32□□□□□ -1.88
CD248Q9HCU0 AL513477.1-202ENST00000417061 214 ntBASIC3.32□□□□□ -1.88
CD248Q9HCU0 OOSP1P1-201ENST00000423265 274 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 205.9 ms