Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RNA5SP293-201ENST00000410527 113 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 AC027124.2-201ENST00000428249 105 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 CYCSP4-201ENST00000429682 331 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 RPL23AP67-201ENST00000465341 474 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 RPS4XP13-201ENST00000483219 789 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 RNA5SP272-201ENST00000516095 111 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 RNU6-436P-201ENST00000516171 114 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 AC006380.1-201ENST00000603598 186 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 AC091152.3-201ENST00000604227 325 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 AL034555.1-201ENST00000604816 211 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 AL137843.1-201ENST00000605078 385 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 U3.45-201ENST00000607547 219 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 AL161912.2-201ENST00000565707 3007 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 RNA5SP119-201ENST00000362715 117 ntBASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 Y_RNA.343-201ENST00000365354 112 ntBASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 RNU4-17P-201ENST00000365598 141 ntBASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 Y_RNA.488-201ENST00000384403 102 ntBASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 MIR218-2-201ENST00000385006 110 ntBASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 SNORA40.19-201ENST00000390846 128 ntBASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 AC004866.1-201ENST00000411748 78 ntBASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 PTGES3P4-201ENST00000426243 356 ntBASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 HMGN2P16-201ENST00000456802 261 ntBASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 RPL31P41-201ENST00000477967 372 ntBASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 RNU1-117P-201ENST00000517041 158 ntBASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 RNU2-12P-201ENST00000517216 168 ntBASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 AC009127.3-201ENST00000570531 403 ntBASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 AL356575.1-201ENST00000603008 283 ntBASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 AC099778.2-201ENST00000610904 211 ntBASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 AC012531.5-201ENST00000611375 151 ntBASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 U6.98-201ENST00000637157 84 ntBASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 AC134026.1-201ENST00000623249 2239 ntBASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SEC61A2Q9H9S3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SEC61A2Q9H9S3 RNU4-35P-201ENST00000362588 141 ntBASIC3.06□□□□□ -1.92
SEC61A2Q9H9S3 Y_RNA.357-201ENST00000365487 109 ntBASIC3.06□□□□□ -1.92
SEC61A2Q9H9S3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.06□□□□□ -1.92
SEC61A2Q9H9S3 RNU6-1248P-201ENST00000391096 64 ntBASIC3.06□□□□□ -1.92
SEC61A2Q9H9S3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.06□□□□□ -1.92
SEC61A2Q9H9S3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.06□□□□□ -1.92
SEC61A2Q9H9S3 RPS27AP9-201ENST00000477681 438 ntBASIC3.06□□□□□ -1.92
SEC61A2Q9H9S3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.06□□□□□ -1.92
SEC61A2Q9H9S3 RNU1-61P-201ENST00000516107 151 ntBASIC3.06□□□□□ -1.92
SEC61A2Q9H9S3 SNORD116-25-201ENST00000516517 92 ntBASIC3.06□□□□□ -1.92
SEC61A2Q9H9S3 AC107934.2-201ENST00000518653 310 ntBASIC3.06□□□□□ -1.92
SEC61A2Q9H9S3 RPS15AP11-201ENST00000594193 385 ntBASIC3.06□□□□□ -1.92
SEC61A2Q9H9S3 AC005520.5-201ENST00000613926 164 ntBASIC3.06□□□□□ -1.92
SEC61A2Q9H9S3 AC012314.7-201ENST00000619693 93 ntBASIC3.06□□□□□ -1.92
SEC61A2Q9H9S3 MIR6075-201ENST00000620782 95 ntBASIC3.06□□□□□ -1.92
SEC61A2Q9H9S3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.06□□□□□ -1.92
SEC61A2Q9H9S3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 AF127577.6-201ENST00000623352 2191 ntBASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 RNU6-1290P-201ENST00000362957 109 ntBASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 RNU6-151P-201ENST00000364158 107 ntBASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 RNU4-10P-201ENST00000364383 140 ntBASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 Y_RNA.400-201ENST00000383963 111 ntBASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 MIR183-201ENST00000384958 110 ntBASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 RNU2-51P-201ENST00000410708 197 ntBASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 AL162725.1-201ENST00000435405 301 ntBASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 RPS20P10-201ENST00000451209 253 ntBASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 U3.44-201ENST00000458938 192 ntBASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 AC008155.2-201ENST00000464337 397 ntBASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 RN7SL293P-201ENST00000481765 281 ntBASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 AC092185.1-201ENST00000491371 97 ntBASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 AC069200.1-201ENST00000609511 323 ntBASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 PCGEM1.1-201ENST00000613431 131 ntBASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 U6.105-201ENST00000637379 88 ntBASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.05□□□□□ -1.92
SEC61A2Q9H9S3 AC068700.1-201ENST00000565862 3754 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 MIR30E-201ENST00000362104 92 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 RNU6-1048P-201ENST00000364054 107 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 RNU6-801P-201ENST00000364087 105 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 RNU6-312P-201ENST00000364629 107 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 SNORA18.2-201ENST00000383865 132 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 RNU6-1264P-201ENST00000383891 107 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 RNU6-22P-201ENST00000384355 107 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 RNU6-959P-201ENST00000384671 107 ntBASIC3.04□□□□□ -1.92
SEC61A2Q9H9S3 SNORA1.3-201ENST00000384676 136 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms