Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AP000648.3-201ENST00000623539 4507 ntBASIC1.81□□□□□ -2.12
RNF41Q9H4P4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.8□□□□□ -2.12
RNF41Q9H4P4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
RNF41Q9H4P4 Y_RNA.123-201ENST00000363338 102 ntBASIC1.8□□□□□ -2.12
RNF41Q9H4P4 RNU6-60P-201ENST00000364792 103 ntBASIC1.8□□□□□ -2.12
RNF41Q9H4P4 RNU6-1286P-201ENST00000383871 107 ntBASIC1.8□□□□□ -2.12
RNF41Q9H4P4 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.8□□□□□ -2.12
RNF41Q9H4P4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.8□□□□□ -2.12
RNF41Q9H4P4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.8□□□□□ -2.12
RNF41Q9H4P4 AL137159.1-201ENST00000452808 512 ntBASIC1.8□□□□□ -2.12
RNF41Q9H4P4 AC079354.2-201ENST00000453523 154 ntBASIC1.8□□□□□ -2.12
RNF41Q9H4P4 AC130509.1-201ENST00000464158 433 ntBASIC1.8□□□□□ -2.12
RNF41Q9H4P4 AC107032.1-201ENST00000485945 480 ntBASIC1.8□□□□□ -2.12
RNF41Q9H4P4 AC114801.2-201ENST00000503825 781 ntBASIC1.8□□□□□ -2.12
RNF41Q9H4P4 EIF4A1P12-201ENST00000551910 141 ntBASIC1.8□□□□□ -2.12
RNF41Q9H4P4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.8□□□□□ -2.12
RNF41Q9H4P4 MIR4769-201ENST00000584126 77 ntBASIC1.8□□□□□ -2.12
RNF41Q9H4P4 AC060780.3-201ENST00000589464 80 ntBASIC1.8□□□□□ -2.12
RNF41Q9H4P4 AL627230.6-201ENST00000611129 280 ntBASIC1.8□□□□□ -2.12
RNF41Q9H4P4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.8□□□□□ -2.12
RNF41Q9H4P4 U6atac.1-201ENST00000616025 117 ntBASIC1.8□□□□□ -2.12
RNF41Q9H4P4 AC009248.2-201ENST00000619826 254 ntBASIC1.8□□□□□ -2.12
RNF41Q9H4P4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.8□□□□□ -2.12
RNF41Q9H4P4 AL133216.2-202ENST00000634512 349 ntBASIC1.8□□□□□ -2.12
RNF41Q9H4P4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RNF41Q9H4P4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.8□□□□□ -2.12
RNF41Q9H4P4 U3.9-201ENST00000363823 204 ntBASIC1.79□□□□□ -2.12
RNF41Q9H4P4 RNU6-457P-201ENST00000363999 107 ntBASIC1.79□□□□□ -2.12
RNF41Q9H4P4 RNU6-26P-201ENST00000383985 107 ntBASIC1.79□□□□□ -2.12
RNF41Q9H4P4 MIR521-1-201ENST00000384902 87 ntBASIC1.79□□□□□ -2.12
RNF41Q9H4P4 RNU2-41P-201ENST00000410991 178 ntBASIC1.79□□□□□ -2.12
RNF41Q9H4P4 AC009161.1-201ENST00000417306 376 ntBASIC1.79□□□□□ -2.12
RNF41Q9H4P4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.79□□□□□ -2.12
RNF41Q9H4P4 RPL31P63-201ENST00000422565 375 ntBASIC1.79□□□□□ -2.12
RNF41Q9H4P4 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.79□□□□□ -2.12
RNF41Q9H4P4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.79□□□□□ -2.12
RNF41Q9H4P4 MTND1P17-201ENST00000448961 204 ntBASIC1.79□□□□□ -2.12
RNF41Q9H4P4 AF186996.7-201ENST00000492781 209 ntBASIC1.79□□□□□ -2.12
RNF41Q9H4P4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.79□□□□□ -2.12
RNF41Q9H4P4 HMGB3P17-201ENST00000504195 649 ntBASIC1.79□□□□□ -2.12
RNF41Q9H4P4 MRPS17P9-201ENST00000511924 393 ntBASIC1.79□□□□□ -2.12
RNF41Q9H4P4 RNU6-566P-201ENST00000516790 107 ntBASIC1.79□□□□□ -2.12
RNF41Q9H4P4 RNA5SP454-201ENST00000517231 127 ntBASIC1.79□□□□□ -2.12
RNF41Q9H4P4 SNORA31.24-201ENST00000517232 57 ntBASIC1.79□□□□□ -2.12
RNF41Q9H4P4 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RNF41Q9H4P4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.79□□□□□ -2.12
RNF41Q9H4P4 AC109446.1-201ENST00000566172 220 ntBASIC1.79□□□□□ -2.12
RNF41Q9H4P4 AL031274.2-201ENST00000599419 203 ntBASIC1.79□□□□□ -2.12
RNF41Q9H4P4 BNIP3P10-201ENST00000605360 577 ntBASIC1.79□□□□□ -2.12
RNF41Q9H4P4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RNF41Q9H4P4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
RNF41Q9H4P4 RNA5SP276-201ENST00000362580 94 ntBASIC1.78□□□□□ -2.12
RNF41Q9H4P4 RNU6-1164P-201ENST00000364428 107 ntBASIC1.78□□□□□ -2.12
RNF41Q9H4P4 RNU4-56P-201ENST00000364700 142 ntBASIC1.78□□□□□ -2.12
RNF41Q9H4P4 RNU6-234P-201ENST00000365229 104 ntBASIC1.78□□□□□ -2.12
RNF41Q9H4P4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.78□□□□□ -2.12
RNF41Q9H4P4 SNORA32.2-201ENST00000384049 122 ntBASIC1.78□□□□□ -2.12
RNF41Q9H4P4 MIR518A2-201ENST00000384966 87 ntBASIC1.78□□□□□ -2.12
RNF41Q9H4P4 MIR1323-201ENST00000408090 73 ntBASIC1.78□□□□□ -2.12
RNF41Q9H4P4 MIR1304-201ENST00000408243 91 ntBASIC1.78□□□□□ -2.12
RNF41Q9H4P4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.78□□□□□ -2.12
RNF41Q9H4P4 SRIP3-201ENST00000413200 219 ntBASIC1.78□□□□□ -2.12
RNF41Q9H4P4 AL590556.1-201ENST00000423231 483 ntBASIC1.78□□□□□ -2.12
RNF41Q9H4P4 MTCO3P46-201ENST00000425787 232 ntBASIC1.78□□□□□ -2.12
RNF41Q9H4P4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.78□□□□□ -2.12
RNF41Q9H4P4 FTH1P25-201ENST00000447665 469 ntBASIC1.78□□□□□ -2.12
RNF41Q9H4P4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.78□□□□□ -2.12
RNF41Q9H4P4 PCMTD1P1-201ENST00000455560 355 ntBASIC1.78□□□□□ -2.12
RNF41Q9H4P4 PMCHL2-203ENST00000457791 237 ntBASIC1.78□□□□□ -2.12
RNF41Q9H4P4 snoU13.6-201ENST00000458785 104 ntBASIC1.78□□□□□ -2.12
RNF41Q9H4P4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.78□□□□□ -2.12
RNF41Q9H4P4 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.78□□□□□ -2.12
RNF41Q9H4P4 AC093259.1-201ENST00000509755 300 ntBASIC1.78□□□□□ -2.12
RNF41Q9H4P4 RNU6-567P-201ENST00000516746 107 ntBASIC1.78□□□□□ -2.12
RNF41Q9H4P4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.78□□□□□ -2.12
RNF41Q9H4P4 MIR4287-201ENST00000579398 78 ntBASIC1.78□□□□□ -2.12
RNF41Q9H4P4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.78□□□□□ -2.12
RNF41Q9H4P4 MIR4742-201ENST00000581069 85 ntBASIC1.78□□□□□ -2.12
RNF41Q9H4P4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.78□□□□□ -2.12
RNF41Q9H4P4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.13
RNF41Q9H4P4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.13
RNF41Q9H4P4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
RNF41Q9H4P4 RNU1-42P-201ENST00000364033 160 ntBASIC1.77□□□□□ -2.13
RNF41Q9H4P4 RNA5SP363-201ENST00000365072 115 ntBASIC1.77□□□□□ -2.13
RNF41Q9H4P4 U8.10-201ENST00000384260 133 ntBASIC1.77□□□□□ -2.13
RNF41Q9H4P4 MIR517A-201ENST00000385001 87 ntBASIC1.77□□□□□ -2.13
RNF41Q9H4P4 SNORA17.3-201ENST00000391159 129 ntBASIC1.77□□□□□ -2.13
RNF41Q9H4P4 MIR1283-2-201ENST00000408621 87 ntBASIC1.77□□□□□ -2.13
RNF41Q9H4P4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.77□□□□□ -2.13
RNF41Q9H4P4 RPS26P42-201ENST00000413485 326 ntBASIC1.77□□□□□ -2.13
RNF41Q9H4P4 MTND1P2-201ENST00000430604 821 ntBASIC1.77□□□□□ -2.13
RNF41Q9H4P4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.77□□□□□ -2.13
RNF41Q9H4P4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
RNF41Q9H4P4 HMGN2P18-201ENST00000450680 270 ntBASIC1.77□□□□□ -2.13
RNF41Q9H4P4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.77□□□□□ -2.13
RNF41Q9H4P4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.77□□□□□ -2.13
RNF41Q9H4P4 RPL23AP75-201ENST00000491601 451 ntBASIC1.77□□□□□ -2.13
RNF41Q9H4P4 AC018710.1-201ENST00000506509 158 ntBASIC1.77□□□□□ -2.13
RNF41Q9H4P4 ATP5EP1-201ENST00000510257 156 ntBASIC1.77□□□□□ -2.13
RNF41Q9H4P4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms