Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 AL031121.1-201ENST00000406553 254 ntBASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 Z98941.1-201ENST00000407764 100 ntBASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 Y_RNA.593-201ENST00000410292 98 ntBASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 RHEBP3-201ENST00000411920 351 ntBASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 snoU13.28-201ENST00000459235 104 ntBASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 RNU7-170P-201ENST00000459303 61 ntBASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 RN7SL807P-201ENST00000470923 297 ntBASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 RPS29P21-201ENST00000496272 170 ntBASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 RNU6-1270P-201ENST00000517128 108 ntBASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 MIR3609-201ENST00000582661 80 ntBASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 AL391358.1-201ENST00000605342 190 ntBASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 FAM27B-201ENST00000610601 213 ntBASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 AC096577.2-201ENST00000611455 153 ntBASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 MAPK10-253ENST00000641010 4072 ntBASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 Y_RNA.17-201ENST00000362433 111 ntBASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 Y_RNA.265-201ENST00000364677 108 ntBASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 RNU2-49P-201ENST00000410666 184 ntBASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 CHEK2P5-201ENST00000423877 246 ntBASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 AL732292.1-201ENST00000426692 226 ntBASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 AC016717.1-201ENST00000448918 286 ntBASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 PPIAP20-201ENST00000449839 135 ntBASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 RNU6-893P-201ENST00000458841 100 ntBASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 RN7SL172P-201ENST00000460535 303 ntBASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 PARP4P3-201ENST00000510265 317 ntBASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 RNY4P20-201ENST00000516678 93 ntBASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 AC012531.5-201ENST00000611375 151 ntBASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 AC010889.1-201ENST00000566193 2666 ntBASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
SSBP4Q9BWG4 RNA5SP322-201ENST00000363617 119 ntBASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 Y_RNA.221-201ENST00000364248 96 ntBASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 RNY1P1-201ENST00000364372 112 ntBASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 SNORD24-201ENST00000383884 75 ntBASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 SNORD61-201ENST00000384252 73 ntBASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 MIR223-201ENST00000385204 110 ntBASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 RNU6-972P-201ENST00000391208 107 ntBASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 SDHCP2-201ENST00000398565 501 ntBASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 RN7SKP206-201ENST00000410823 293 ntBASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 AC008134.1-201ENST00000420943 193 ntBASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 EIF4EP4-201ENST00000424916 578 ntBASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 SCARNA22-201ENST00000503991 125 ntBASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 RNU6-830P-201ENST00000516353 107 ntBASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 Vault.1-201ENST00000516474 102 ntBASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 AP001781.1-201ENST00000530977 207 ntBASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 AC008739.2-201ENST00000597006 317 ntBASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 AL672296.1-201ENST00000427780 2158 ntBASIC3.35□□□□□ -1.87
SSBP4Q9BWG4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
SSBP4Q9BWG4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.34□□□□□ -1.87
SSBP4Q9BWG4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.34□□□□□ -1.87
SSBP4Q9BWG4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.34□□□□□ -1.87
SSBP4Q9BWG4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
SSBP4Q9BWG4 MIR323A-201ENST00000362199 86 ntBASIC3.34□□□□□ -1.87
SSBP4Q9BWG4 RNA5SP307-201ENST00000362863 116 ntBASIC3.34□□□□□ -1.87
SSBP4Q9BWG4 RNU6-888P-201ENST00000363010 101 ntBASIC3.34□□□□□ -1.87
SSBP4Q9BWG4 RNU4-36P-201ENST00000364294 144 ntBASIC3.34□□□□□ -1.87
SSBP4Q9BWG4 RNA5SP189-201ENST00000364920 115 ntBASIC3.34□□□□□ -1.87
SSBP4Q9BWG4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SSBP4Q9BWG4 RN7SKP267-201ENST00000410381 285 ntBASIC3.34□□□□□ -1.87
SSBP4Q9BWG4 RNA5SP306-201ENST00000411087 107 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms