Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AL158827.2-201ENST00000602494 330 ntBASIC1.87□□□□□ -2.11
CCM2Q9BSQ5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.87□□□□□ -2.11
CCM2Q9BSQ5 AC009318.2-201ENST00000610917 651 ntBASIC1.87□□□□□ -2.11
CCM2Q9BSQ5 AC005520.5-201ENST00000613926 164 ntBASIC1.87□□□□□ -2.11
CCM2Q9BSQ5 MIR6128-201ENST00000615528 109 ntBASIC1.87□□□□□ -2.11
CCM2Q9BSQ5 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.87□□□□□ -2.11
CCM2Q9BSQ5 DUXAP9-208ENST00000622815 614 ntBASIC1.87□□□□□ -2.11
CCM2Q9BSQ5 AL691447.3-201ENST00000635020 330 ntBASIC1.87□□□□□ -2.11
CCM2Q9BSQ5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CCM2Q9BSQ5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CCM2Q9BSQ5 CASC19-280ENST00000642102 1351 ntBASIC1.86□□□□□ -2.11
CCM2Q9BSQ5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CCM2Q9BSQ5 Y_RNA.301-201ENST00000364990 103 ntBASIC1.86□□□□□ -2.11
CCM2Q9BSQ5 MIR29C-201ENST00000385231 88 ntBASIC1.86□□□□□ -2.11
CCM2Q9BSQ5 AL445685.2-201ENST00000422551 342 ntBASIC1.86□□□□□ -2.11
CCM2Q9BSQ5 AC087477.1-201ENST00000465747 340 ntBASIC1.86□□□□□ -2.11
CCM2Q9BSQ5 RPL23AP42-201ENST00000471152 471 ntBASIC1.86□□□□□ -2.11
CCM2Q9BSQ5 RPL23AP75-201ENST00000491601 451 ntBASIC1.86□□□□□ -2.11
CCM2Q9BSQ5 RNU6-1098P-201ENST00000516772 96 ntBASIC1.86□□□□□ -2.11
CCM2Q9BSQ5 RNU1-54P-201ENST00000517181 120 ntBASIC1.86□□□□□ -2.11
CCM2Q9BSQ5 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.86□□□□□ -2.11
CCM2Q9BSQ5 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.86□□□□□ -2.11
CCM2Q9BSQ5 AP005660.1-201ENST00000522972 293 ntBASIC1.86□□□□□ -2.11
CCM2Q9BSQ5 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.86□□□□□ -2.11
CCM2Q9BSQ5 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.86□□□□□ -2.11
CCM2Q9BSQ5 AC009994.1-201ENST00000606889 253 ntBASIC1.86□□□□□ -2.11
CCM2Q9BSQ5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
CCM2Q9BSQ5 CBX3P1-201ENST00000325243 554 ntBASIC1.85□□□□□ -2.11
CCM2Q9BSQ5 SNORD50.1-201ENST00000362987 71 ntBASIC1.85□□□□□ -2.11
CCM2Q9BSQ5 SNORA18.2-201ENST00000383865 132 ntBASIC1.85□□□□□ -2.11
CCM2Q9BSQ5 MIR583-201ENST00000384846 75 ntBASIC1.85□□□□□ -2.11
CCM2Q9BSQ5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CCM2Q9BSQ5 RNU11-3P-201ENST00000391111 133 ntBASIC1.85□□□□□ -2.11
CCM2Q9BSQ5 RNU6-876P-201ENST00000391295 104 ntBASIC1.85□□□□□ -2.11
CCM2Q9BSQ5 SUMO2P12-201ENST00000405924 140 ntBASIC1.85□□□□□ -2.11
CCM2Q9BSQ5 BX510359.4-201ENST00000423750 193 ntBASIC1.85□□□□□ -2.11
CCM2Q9BSQ5 HMGN2P3-201ENST00000433603 273 ntBASIC1.85□□□□□ -2.11
CCM2Q9BSQ5 HMGN2P5-201ENST00000436882 273 ntBASIC1.85□□□□□ -2.11
CCM2Q9BSQ5 FTH1P25-201ENST00000447665 469 ntBASIC1.85□□□□□ -2.11
CCM2Q9BSQ5 AF186996.7-201ENST00000492781 209 ntBASIC1.85□□□□□ -2.11
CCM2Q9BSQ5 RPS23P5-201ENST00000495419 428 ntBASIC1.85□□□□□ -2.11
CCM2Q9BSQ5 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.85□□□□□ -2.11
CCM2Q9BSQ5 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.85□□□□□ -2.11
CCM2Q9BSQ5 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.85□□□□□ -2.11
CCM2Q9BSQ5 MIR4742-201ENST00000581069 85 ntBASIC1.85□□□□□ -2.11
CCM2Q9BSQ5 MIR4273-201ENST00000582824 84 ntBASIC1.85□□□□□ -2.11
CCM2Q9BSQ5 AL359314.1-201ENST00000616913 261 ntBASIC1.85□□□□□ -2.11
CCM2Q9BSQ5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 AC009487.4-201ENST00000624969 3585 ntBASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 RNA5SP276-201ENST00000362580 94 ntBASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 Y_RNA.99-201ENST00000363138 105 ntBASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 Y_RNA.160-201ENST00000363677 92 ntBASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 RNU6-1026P-201ENST00000384465 108 ntBASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 MIR549A-201ENST00000385268 96 ntBASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 MTND3P8-201ENST00000412909 339 ntBASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 RPL31P63-201ENST00000422565 375 ntBASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 MTND1P2-201ENST00000430604 821 ntBASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 SNRPEP8-201ENST00000442866 260 ntBASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 FO393415.2-201ENST00000480085 343 ntBASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 ATP5EP1-201ENST00000510257 156 ntBASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 AC110588.1-201ENST00000559699 137 ntBASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 AC016727.2-201ENST00000603988 621 ntBASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 AL022345.1-201ENST00000607292 135 ntBASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 AC130454.1-201ENST00000622948 401 ntBASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 AL133216.2-202ENST00000634512 349 ntBASIC1.84□□□□□ -2.11
CCM2Q9BSQ5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
CCM2Q9BSQ5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
CCM2Q9BSQ5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
CCM2Q9BSQ5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CCM2Q9BSQ5 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.83□□□□□ -2.12
CCM2Q9BSQ5 MTND5P9-201ENST00000503854 1755 ntBASIC1.83□□□□□ -2.12
CCM2Q9BSQ5 Y_RNA.72-201ENST00000362894 103 ntBASIC1.83□□□□□ -2.12
CCM2Q9BSQ5 U8.13-201ENST00000390842 128 ntBASIC1.83□□□□□ -2.12
CCM2Q9BSQ5 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CCM2Q9BSQ5 AL356432.1-201ENST00000405809 419 ntBASIC1.83□□□□□ -2.12
CCM2Q9BSQ5 AL353689.1-201ENST00000438895 199 ntBASIC1.83□□□□□ -2.12
CCM2Q9BSQ5 MTND1P17-201ENST00000448961 204 ntBASIC1.83□□□□□ -2.12
CCM2Q9BSQ5 OR2AQ1P-201ENST00000451972 200 ntBASIC1.83□□□□□ -2.12
CCM2Q9BSQ5 AC079354.2-201ENST00000453523 154 ntBASIC1.83□□□□□ -2.12
CCM2Q9BSQ5 TOMM22P6-201ENST00000465035 409 ntBASIC1.83□□□□□ -2.12
CCM2Q9BSQ5 RN7SL274P-201ENST00000492268 272 ntBASIC1.83□□□□□ -2.12
CCM2Q9BSQ5 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.83□□□□□ -2.12
CCM2Q9BSQ5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.83□□□□□ -2.12
CCM2Q9BSQ5 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.83□□□□□ -2.12
CCM2Q9BSQ5 AC137590.2-201ENST00000619709 240 ntBASIC1.83□□□□□ -2.12
CCM2Q9BSQ5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
CCM2Q9BSQ5 ZNF702P-202ENST00000434269 1966 ntBASIC1.82□□□□□ -2.12
CCM2Q9BSQ5 RNU6-1164P-201ENST00000364428 107 ntBASIC1.82□□□□□ -2.12
CCM2Q9BSQ5 MIR32-201ENST00000384965 70 ntBASIC1.82□□□□□ -2.12
CCM2Q9BSQ5 MIR597-201ENST00000384968 97 ntBASIC1.82□□□□□ -2.12
CCM2Q9BSQ5 SNORA40.18-201ENST00000391200 128 ntBASIC1.82□□□□□ -2.12
CCM2Q9BSQ5 RNA5SP450-201ENST00000411206 102 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms