Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 RNU6-944P-201ENST00000364023 107 ntBASIC2.83□□□□□ -1.96
VRK1Q99986 RNA5SP240-201ENST00000365355 128 ntBASIC2.83□□□□□ -1.96
VRK1Q99986 RNU6-574P-201ENST00000384265 107 ntBASIC2.83□□□□□ -1.96
VRK1Q99986 FO393413.1-201ENST00000402892 195 ntBASIC2.83□□□□□ -1.96
VRK1Q99986 AC004866.1-201ENST00000411748 78 ntBASIC2.83□□□□□ -1.96
VRK1Q99986 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.83□□□□□ -1.96
VRK1Q99986 AL161788.1-201ENST00000441805 169 ntBASIC2.83□□□□□ -1.96
VRK1Q99986 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.83□□□□□ -1.96
VRK1Q99986 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.83□□□□□ -1.96
VRK1Q99986 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.83□□□□□ -1.96
VRK1Q99986 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.83□□□□□ -1.96
VRK1Q99986 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.83□□□□□ -1.96
VRK1Q99986 SNORD11B-201ENST00000607707 90 ntBASIC2.83□□□□□ -1.96
VRK1Q99986 AL357075.2-201ENST00000614906 189 ntBASIC2.83□□□□□ -1.96
VRK1Q99986 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.83□□□□□ -1.96
VRK1Q99986 AC093831.2-201ENST00000624393 3427 ntBASIC2.83□□□□□ -1.96
VRK1Q99986 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
VRK1Q99986 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.83□□□□□ -1.96
VRK1Q99986 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
VRK1Q99986 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VRK1Q99986 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
VRK1Q99986 Y_RNA.26-201ENST00000362539 101 ntBASIC2.82□□□□□ -1.96
VRK1Q99986 Y_RNA.64-201ENST00000362845 102 ntBASIC2.82□□□□□ -1.96
VRK1Q99986 Y_RNA.143-201ENST00000363520 106 ntBASIC2.82□□□□□ -1.96
VRK1Q99986 Y_RNA.222-201ENST00000364264 102 ntBASIC2.82□□□□□ -1.96
VRK1Q99986 RNU6-806P-201ENST00000365147 105 ntBASIC2.82□□□□□ -1.96
VRK1Q99986 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VRK1Q99986 Y_RNA.512-201ENST00000384518 102 ntBASIC2.82□□□□□ -1.96
VRK1Q99986 MIR627-201ENST00000384979 97 ntBASIC2.82□□□□□ -1.96
VRK1Q99986 RNU6-220P-201ENST00000390919 107 ntBASIC2.82□□□□□ -1.96
VRK1Q99986 RNU6-121P-201ENST00000410525 99 ntBASIC2.82□□□□□ -1.96
VRK1Q99986 RN7SKP58-201ENST00000411010 305 ntBASIC2.82□□□□□ -1.96
VRK1Q99986 BMS1P22-201ENST00000414726 313 ntBASIC2.82□□□□□ -1.96
VRK1Q99986 RN7SL75P-201ENST00000461926 281 ntBASIC2.82□□□□□ -1.96
VRK1Q99986 RPS23P5-201ENST00000495419 428 ntBASIC2.82□□□□□ -1.96
VRK1Q99986 RNU6-56P-201ENST00000516986 93 ntBASIC2.82□□□□□ -1.96
VRK1Q99986 AP003733.2-201ENST00000529409 171 ntBASIC2.82□□□□□ -1.96
VRK1Q99986 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.82□□□□□ -1.96
VRK1Q99986 AC136932.1-201ENST00000574771 208 ntBASIC2.82□□□□□ -1.96
VRK1Q99986 AC005000.2-201ENST00000605468 310 ntBASIC2.82□□□□□ -1.96
VRK1Q99986 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.82□□□□□ -1.96
VRK1Q99986 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.82□□□□□ -1.96
VRK1Q99986 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.81□□□□□ -1.96
VRK1Q99986 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VRK1Q99986 Y_RNA.105-201ENST00000363182 111 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 Y_RNA.193-201ENST00000363979 102 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 Y_RNA.230-201ENST00000364348 109 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 RNU6-702P-201ENST00000364982 107 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 MIR128-1-201ENST00000384921 82 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
VRK1Q99986 SNORA48.2-201ENST00000390926 124 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 AL357075.1-201ENST00000404107 726 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 RNU5A-5P-201ENST00000411054 116 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 AC003685.2-201ENST00000422795 395 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 CST9LP2-201ENST00000437612 320 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 AC005002.2-201ENST00000438228 269 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.81□□□□□ -1.96
VRK1Q99986 UQCRBP2-201ENST00000447827 297 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 RN7SL499P-201ENST00000481141 276 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 RN7SL504P-201ENST00000494496 287 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 RNU6-408P-201ENST00000515910 100 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 SNORA48.11-201ENST00000517015 89 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 SCARNA20.6-201ENST00000517251 106 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.81□□□□□ -1.96
VRK1Q99986 AK6P2-201ENST00000549020 471 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 RRN3P3-201ENST00000549207 578 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 AC018448.1-201ENST00000552843 316 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.81□□□□□ -1.96
VRK1Q99986 MIR4423-201ENST00000580922 80 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 MIR4300-201ENST00000581016 96 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 MIR3117-201ENST00000584034 78 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 AL162274.2-201ENST00000614406 332 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 MIR376A1-201ENST00000616574 68 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 MIR8057-201ENST00000620957 69 ntBASIC2.81□□□□□ -1.96
VRK1Q99986 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VRK1Q99986 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VRK1Q99986 RNU6-626P-201ENST00000363354 107 ntBASIC2.8□□□□□ -1.96
VRK1Q99986 RNU6-961P-201ENST00000363893 105 ntBASIC2.8□□□□□ -1.96
VRK1Q99986 SNORA67.2-201ENST00000384300 149 ntBASIC2.8□□□□□ -1.96
VRK1Q99986 AL033519.2-201ENST00000403958 392 ntBASIC2.8□□□□□ -1.96
VRK1Q99986 RNU2-63P-201ENST00000410792 194 ntBASIC2.8□□□□□ -1.96
VRK1Q99986 ELOCP21-201ENST00000412558 336 ntBASIC2.8□□□□□ -1.96
VRK1Q99986 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.8□□□□□ -1.96
VRK1Q99986 NDUFB4P10-201ENST00000452541 359 ntBASIC2.8□□□□□ -1.96
VRK1Q99986 RPS29P2-201ENST00000479278 136 ntBASIC2.8□□□□□ -1.96
VRK1Q99986 AC023043.3-201ENST00000593113 385 ntBASIC2.8□□□□□ -1.96
VRK1Q99986 AC073657.2-201ENST00000605661 303 ntBASIC2.8□□□□□ -1.96
VRK1Q99986 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.8□□□□□ -1.96
VRK1Q99986 AC068205.3-201ENST00000636385 468 ntBASIC2.8□□□□□ -1.96
VRK1Q99986 U6.104-201ENST00000637979 90 ntBASIC2.8□□□□□ -1.96
VRK1Q99986 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
VRK1Q99986 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
VRK1Q99986 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VRK1Q99986 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.79□□□□□ -1.96
VRK1Q99986 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
VRK1Q99986 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.79□□□□□ -1.96
VRK1Q99986 MIR410-201ENST00000362222 80 ntBASIC2.79□□□□□ -1.96
VRK1Q99986 Y_RNA.401-201ENST00000383965 117 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms