Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 MIR4421-201ENST00000578133 69 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 AL162413.1-201ENST00000603198 110 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 AC104458.1-201ENST00000608243 463 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 AC092807.2-201ENST00000609367 243 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 FAM157A-202ENST00000615155 405 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 AL157834.3-201ENST00000615543 103 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 AP000560.1-201ENST00000624150 1937 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 RNY4P14-201ENST00000363656 96 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 Y_RNA.256-201ENST00000364594 104 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 RNU4-66P-201ENST00000365199 138 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 Y_RNA.516-201ENST00000384541 124 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 MIR517C-201ENST00000385103 95 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 ARL5AP1-201ENST00000418991 388 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.37□□□□□ -2.19
FOXC2Q99958 AC078809.1-201ENST00000427601 140 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 C8orf59P1-201ENST00000429930 303 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 SEPT14P3-201ENST00000439401 183 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 MTND4LP16-201ENST00000440828 295 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 AL732372.2-207ENST00000445840 183 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 SEPT14P2-201ENST00000453405 183 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 RPS29P27-201ENST00000463711 170 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 RPS29P25-201ENST00000481709 171 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 FAM206BP-201ENST00000510179 541 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 SEPT14P4-201ENST00000513445 186 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 RNU1-92P-201ENST00000517017 135 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 FO082796.1-201ENST00000523795 183 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 SUB1P4-201ENST00000566062 339 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 MIR3618-201ENST00000580330 88 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.37□□□□□ -2.19
FOXC2Q99958 MIR3136-201ENST00000583498 78 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 AC136443.5-201ENST00000603741 370 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 AC092747.3-201ENST00000603769 301 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 AP001836.1-201ENST00000604675 523 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 AL034555.1-201ENST00000604816 211 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 AC016925.2-201ENST00000605108 242 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 AC064836.2-201ENST00000609491 462 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 DISC2.1-201ENST00000612827 205 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 OR4G1P-203ENST00000641984 1631 ntBASIC1.37□□□□□ -2.19
FOXC2Q99958 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
FOXC2Q99958 MIR126-201ENST00000362291 85 ntBASIC1.36□□□□□ -2.19
FOXC2Q99958 RNU6-234P-201ENST00000365229 104 ntBASIC1.36□□□□□ -2.19
FOXC2Q99958 Y_RNA.332-201ENST00000365271 113 ntBASIC1.36□□□□□ -2.19
FOXC2Q99958 RNU6-1329P-201ENST00000365664 107 ntBASIC1.36□□□□□ -2.19
FOXC2Q99958 RNU6-26P-201ENST00000383985 107 ntBASIC1.36□□□□□ -2.19
FOXC2Q99958 SNORD73A-201ENST00000386062 65 ntBASIC1.36□□□□□ -2.19
FOXC2Q99958 MTCO1P21-201ENST00000416634 589 ntBASIC1.36□□□□□ -2.19
FOXC2Q99958 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.36□□□□□ -2.19
FOXC2Q99958 NCOR1P3-201ENST00000420479 303 ntBASIC1.36□□□□□ -2.19
FOXC2Q99958 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.36□□□□□ -2.19
FOXC2Q99958 ERLEC1P1-201ENST00000433806 578 ntBASIC1.36□□□□□ -2.19
FOXC2Q99958 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.36□□□□□ -2.19
FOXC2Q99958 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.36□□□□□ -2.19
FOXC2Q99958 RNU1-131P-201ENST00000458943 161 ntBASIC1.36□□□□□ -2.19
FOXC2Q99958 HMGN2P26-201ENST00000463169 339 ntBASIC1.36□□□□□ -2.19
FOXC2Q99958 AC145146.1-201ENST00000496370 254 ntBASIC1.36□□□□□ -2.19
FOXC2Q99958 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.36□□□□□ -2.19
FOXC2Q99958 AC087854.1-201ENST00000519706 414 ntBASIC1.36□□□□□ -2.19
FOXC2Q99958 AC011604.1-201ENST00000545978 196 ntBASIC1.36□□□□□ -2.19
FOXC2Q99958 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.36□□□□□ -2.19
FOXC2Q99958 MIR4419B-201ENST00000577260 68 ntBASIC1.36□□□□□ -2.19
FOXC2Q99958 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.36□□□□□ -2.19
FOXC2Q99958 AC100830.2-201ENST00000581636 240 ntBASIC1.36□□□□□ -2.19
FOXC2Q99958 AC010525.2-201ENST00000590920 195 ntBASIC1.36□□□□□ -2.19
FOXC2Q99958 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.36□□□□□ -2.19
FOXC2Q99958 AC004492.1-201ENST00000607036 742 ntBASIC1.36□□□□□ -2.19
FOXC2Q99958 AC090517.2-201ENST00000614966 680 ntBASIC1.36□□□□□ -2.19
FOXC2Q99958 AL590240.4-201ENST00000616908 390 ntBASIC1.36□□□□□ -2.19
FOXC2Q99958 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.36□□□□□ -2.19
FOXC2Q99958 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.36□□□□□ -2.19
FOXC2Q99958 SNORA43.4-201ENST00000629559 138 ntBASIC1.36□□□□□ -2.19
FOXC2Q99958 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
FOXC2Q99958 RNU6-254P-201ENST00000363377 107 ntBASIC1.35□□□□□ -2.19
FOXC2Q99958 RNU6-1090P-201ENST00000364065 94 ntBASIC1.35□□□□□ -2.19
FOXC2Q99958 SNORD114-22-201ENST00000365423 72 ntBASIC1.35□□□□□ -2.19
FOXC2Q99958 EIF4E2P1-201ENST00000393781 255 ntBASIC1.35□□□□□ -2.19
FOXC2Q99958 AL590002.1-201ENST00000406554 418 ntBASIC1.35□□□□□ -2.19
FOXC2Q99958 SNRPEP10-201ENST00000420249 274 ntBASIC1.35□□□□□ -2.19
FOXC2Q99958 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.35□□□□□ -2.19
FOXC2Q99958 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.35□□□□□ -2.19
FOXC2Q99958 AL031274.1-201ENST00000450334 232 ntBASIC1.35□□□□□ -2.19
FOXC2Q99958 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.35□□□□□ -2.19
FOXC2Q99958 RNU7-66P-201ENST00000459469 62 ntBASIC1.35□□□□□ -2.19
FOXC2Q99958 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.35□□□□□ -2.19
FOXC2Q99958 AC091874.1-201ENST00000511402 339 ntBASIC1.35□□□□□ -2.19
FOXC2Q99958 Y_RNA.665-201ENST00000516177 98 ntBASIC1.35□□□□□ -2.19
FOXC2Q99958 SNORA31.24-201ENST00000517232 57 ntBASIC1.35□□□□□ -2.19
FOXC2Q99958 MTND1P5-201ENST00000517906 940 ntBASIC1.35□□□□□ -2.19
FOXC2Q99958 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.35□□□□□ -2.19
FOXC2Q99958 ZNF519P2-201ENST00000557032 169 ntBASIC1.35□□□□□ -2.19
FOXC2Q99958 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.35□□□□□ -2.19
FOXC2Q99958 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.35□□□□□ -2.19
FOXC2Q99958 CPDP1-201ENST00000579660 283 ntBASIC1.35□□□□□ -2.19
FOXC2Q99958 AC005786.1-201ENST00000588553 154 ntBASIC1.35□□□□□ -2.19
FOXC2Q99958 AL121757.2-201ENST00000611223 313 ntBASIC1.35□□□□□ -2.19
FOXC2Q99958 RMST_3.1-201ENST00000611651 109 ntBASIC1.35□□□□□ -2.19
FOXC2Q99958 SNORD98-201ENST00000636377 67 ntBASIC1.35□□□□□ -2.19
FOXC2Q99958 LINC02555-201ENST00000563933 1951 ntBASIC1.35□□□□□ -2.19
FOXC2Q99958 MIR424-201ENST00000362227 98 ntBASIC1.34□□□□□ -2.19
FOXC2Q99958 RNA5SP363-201ENST00000365072 115 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms