Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.05□□□□□ -2.4
AP1S3Q96PC3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.05□□□□□ -2.4
AP1S3Q96PC3 AC073349.3-201ENST00000617616 186 ntBASIC0.05□□□□□ -2.4
AP1S3Q96PC3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.05□□□□□ -2.4
AP1S3Q96PC3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.05□□□□□ -2.4
AP1S3Q96PC3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
AP1S3Q96PC3 AC073343.1-201ENST00000328239 651 ntBASIC0.04□□□□□ -2.4
AP1S3Q96PC3 RNU6-562P-201ENST00000362731 107 ntBASIC0.04□□□□□ -2.4
AP1S3Q96PC3 RNU4-1-201ENST00000363925 141 ntBASIC0.04□□□□□ -2.4
AP1S3Q96PC3 RNU6-413P-201ENST00000384115 107 ntBASIC0.04□□□□□ -2.4
AP1S3Q96PC3 RNA5SP323-201ENST00000391094 133 ntBASIC0.04□□□□□ -2.4
AP1S3Q96PC3 MIR208B-201ENST00000401172 77 ntBASIC0.04□□□□□ -2.4
AP1S3Q96PC3 AL451046.2-201ENST00000403074 277 ntBASIC0.04□□□□□ -2.4
AP1S3Q96PC3 AC004866.1-201ENST00000411748 78 ntBASIC0.04□□□□□ -2.4
AP1S3Q96PC3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.04□□□□□ -2.4
AP1S3Q96PC3 AC104332.1-201ENST00000440471 797 ntBASIC0.04□□□□□ -2.4
AP1S3Q96PC3 AC013470.1-201ENST00000453438 462 ntBASIC0.04□□□□□ -2.4
AP1S3Q96PC3 MTCO2P18-201ENST00000457151 658 ntBASIC0.04□□□□□ -2.4
AP1S3Q96PC3 LRRC34P2-201ENST00000514850 553 ntBASIC0.04□□□□□ -2.4
AP1S3Q96PC3 AC109479.2-201ENST00000517842 174 ntBASIC0.04□□□□□ -2.4
AP1S3Q96PC3 MTND4LP26-201ENST00000518144 282 ntBASIC0.04□□□□□ -2.4
AP1S3Q96PC3 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.04□□□□□ -2.4
AP1S3Q96PC3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.04□□□□□ -2.4
AP1S3Q96PC3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.04□□□□□ -2.4
AP1S3Q96PC3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.04□□□□□ -2.4
AP1S3Q96PC3 RPL17P51-201ENST00000605218 238 ntBASIC0.04□□□□□ -2.4
AP1S3Q96PC3 AC004832.4-201ENST00000608952 331 ntBASIC0.04□□□□□ -2.4
AP1S3Q96PC3 AL138726.1-201ENST00000614873 333 ntBASIC0.04□□□□□ -2.4
AP1S3Q96PC3 AC126544.2-201ENST00000625174 749 ntBASIC0.04□□□□□ -2.4
AP1S3Q96PC3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.04□□□□□ -2.4
AP1S3Q96PC3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
AP1S3Q96PC3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.04□□□□□ -2.4
AP1S3Q96PC3 AP000568.1-201ENST00000282964 442 ntBASIC0.03□□□□□ -2.4
AP1S3Q96PC3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
AP1S3Q96PC3 RNU6-1303P-201ENST00000364841 107 ntBASIC0.03□□□□□ -2.4
AP1S3Q96PC3 Y_RNA.324-201ENST00000365165 102 ntBASIC0.03□□□□□ -2.4
AP1S3Q96PC3 Y_RNA.330-201ENST00000365230 109 ntBASIC0.03□□□□□ -2.4
AP1S3Q96PC3 RNU4-45P-201ENST00000365469 141 ntBASIC0.03□□□□□ -2.4
AP1S3Q96PC3 RNU6-61P-201ENST00000365528 109 ntBASIC0.03□□□□□ -2.4
AP1S3Q96PC3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
AP1S3Q96PC3 Y_RNA.504-201ENST00000384481 104 ntBASIC0.03□□□□□ -2.4
AP1S3Q96PC3 RNU6-342P-201ENST00000384521 104 ntBASIC0.03□□□□□ -2.4
AP1S3Q96PC3 MIR300-201ENST00000401138 83 ntBASIC0.03□□□□□ -2.4
AP1S3Q96PC3 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.03□□□□□ -2.4
AP1S3Q96PC3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.03□□□□□ -2.4
AP1S3Q96PC3 AC245047.3-201ENST00000429428 127 ntBASIC0.03□□□□□ -2.4
AP1S3Q96PC3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.03□□□□□ -2.4
AP1S3Q96PC3 AC007327.1-201ENST00000447461 264 ntBASIC0.03□□□□□ -2.4
AP1S3Q96PC3 RPS20P10-201ENST00000451209 253 ntBASIC0.03□□□□□ -2.4
AP1S3Q96PC3 AC105313.1-201ENST00000509121 353 ntBASIC0.03□□□□□ -2.4
AP1S3Q96PC3 RNU6-1223P-201ENST00000517124 104 ntBASIC0.03□□□□□ -2.4
AP1S3Q96PC3 AC022616.6-201ENST00000520479 119 ntBASIC0.03□□□□□ -2.4
AP1S3Q96PC3 AC106038.2-201ENST00000520706 568 ntBASIC0.03□□□□□ -2.4
AP1S3Q96PC3 AC068587.4-201ENST00000533893 186 ntBASIC0.03□□□□□ -2.4
AP1S3Q96PC3 MIR5692A1-201ENST00000580523 69 ntBASIC0.03□□□□□ -2.4
AP1S3Q96PC3 MTND3P19-201ENST00000603825 345 ntBASIC0.03□□□□□ -2.4
AP1S3Q96PC3 SNRPGP20-201ENST00000604477 205 ntBASIC0.03□□□□□ -2.4
AP1S3Q96PC3 RAC1P9-201ENST00000604990 392 ntBASIC0.03□□□□□ -2.4
AP1S3Q96PC3 AC100812.1-201ENST00000607622 580 ntBASIC0.03□□□□□ -2.4
AP1S3Q96PC3 AL589743.1-201ENST00000551932 2712 ntBASIC0.03□□□□□ -2.4
AP1S3Q96PC3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.03□□□□□ -2.41
AP1S3Q96PC3 RNA5SP264-201ENST00000363115 107 ntBASIC0.02□□□□□ -2.41
AP1S3Q96PC3 SNORA25.9-201ENST00000365087 128 ntBASIC0.02□□□□□ -2.41
AP1S3Q96PC3 MIR936-201ENST00000401264 98 ntBASIC0.02□□□□□ -2.41
AP1S3Q96PC3 MRPL42P3-201ENST00000401492 326 ntBASIC0.02□□□□□ -2.41
AP1S3Q96PC3 RPS29P13-201ENST00000402041 169 ntBASIC0.02□□□□□ -2.41
AP1S3Q96PC3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.02□□□□□ -2.41
AP1S3Q96PC3 MTCYBP10-201ENST00000424905 650 ntBASIC0.02□□□□□ -2.41
AP1S3Q96PC3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.02□□□□□ -2.41
AP1S3Q96PC3 BTBD7P2-201ENST00000441962 620 ntBASIC0.02□□□□□ -2.41
AP1S3Q96PC3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.02□□□□□ -2.41
AP1S3Q96PC3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.02□□□□□ -2.41
AP1S3Q96PC3 MTND1P12-201ENST00000455231 147 ntBASIC0.02□□□□□ -2.41
AP1S3Q96PC3 RNU6-1110P-201ENST00000516462 101 ntBASIC0.02□□□□□ -2.41
AP1S3Q96PC3 RNU6-405P-201ENST00000516637 110 ntBASIC0.02□□□□□ -2.41
AP1S3Q96PC3 RNU6-467P-201ENST00000517027 110 ntBASIC0.02□□□□□ -2.41
AP1S3Q96PC3 AL137100.2-201ENST00000555786 315 ntBASIC0.02□□□□□ -2.41
AP1S3Q96PC3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.02□□□□□ -2.41
AP1S3Q96PC3 SUB1P2-201ENST00000556401 297 ntBASIC0.02□□□□□ -2.41
AP1S3Q96PC3 MIR4753-201ENST00000585119 83 ntBASIC0.02□□□□□ -2.41
AP1S3Q96PC3 RNU6-94P-201ENST00000607728 107 ntBASIC0.02□□□□□ -2.41
AP1S3Q96PC3 MIR8070-201ENST00000616510 88 ntBASIC0.02□□□□□ -2.41
AP1S3Q96PC3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.02□□□□□ -2.41
AP1S3Q96PC3 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.02□□□□□ -2.41
AP1S3Q96PC3 AC099786.3-201ENST00000565735 1410 ntBASIC0.02□□□□□ -2.41
AP1S3Q96PC3 SNORD44.1-201ENST00000363202 61 ntBASIC0.01□□□□□ -2.41
AP1S3Q96PC3 SNORD116-12-201ENST00000384468 92 ntBASIC0.01□□□□□ -2.41
AP1S3Q96PC3 MIR140-201ENST00000385282 100 ntBASIC0.01□□□□□ -2.41
AP1S3Q96PC3 RNU6-1093P-201ENST00000391194 107 ntBASIC0.01□□□□□ -2.41
AP1S3Q96PC3 MTCYBP36-201ENST00000404146 440 ntBASIC0.01□□□□□ -2.41
AP1S3Q96PC3 CALM2P4-201ENST00000430810 426 ntBASIC0.01□□□□□ -2.41
AP1S3Q96PC3 RPL39P39-201ENST00000455840 151 ntBASIC0.01□□□□□ -2.41
AP1S3Q96PC3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.01□□□□□ -2.41
AP1S3Q96PC3 TPT1P7-201ENST00000458300 517 ntBASIC0.01□□□□□ -2.41
AP1S3Q96PC3 AC079382.1-201ENST00000493346 557 ntBASIC0.01□□□□□ -2.41
AP1S3Q96PC3 AC008628.2-201ENST00000502605 298 ntBASIC0.01□□□□□ -2.41
AP1S3Q96PC3 AC010486.2-201ENST00000505572 483 ntBASIC0.01□□□□□ -2.41
AP1S3Q96PC3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.01□□□□□ -2.41
AP1S3Q96PC3 SNORA19.3-201ENST00000516165 130 ntBASIC0.01□□□□□ -2.41
AP1S3Q96PC3 RNU1-142P-201ENST00000516682 145 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms