Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC011352.1-201ENST00000512300 793 ntBASIC1.91□□□□□ -2.1
VPS33AQ96AX1 RNU6-1198P-201ENST00000516904 67 ntBASIC1.91□□□□□ -2.1
VPS33AQ96AX1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.91□□□□□ -2.1
VPS33AQ96AX1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.91□□□□□ -2.1
VPS33AQ96AX1 GNAI2P1-201ENST00000541815 315 ntBASIC1.91□□□□□ -2.1
VPS33AQ96AX1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.91□□□□□ -2.1
VPS33AQ96AX1 AC026464.5-201ENST00000562497 722 ntBASIC1.91□□□□□ -2.1
VPS33AQ96AX1 MIR4672-201ENST00000583126 81 ntBASIC1.91□□□□□ -2.1
VPS33AQ96AX1 AC103810.8-201ENST00000607347 118 ntBASIC1.91□□□□□ -2.1
VPS33AQ96AX1 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.91□□□□□ -2.1
VPS33AQ96AX1 MIR6873-201ENST00000622788 63 ntBASIC1.91□□□□□ -2.1
VPS33AQ96AX1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
VPS33AQ96AX1 RNU6-831P-201ENST00000384548 107 ntBASIC1.9□□□□□ -2.11
VPS33AQ96AX1 RNU6-1148P-201ENST00000410992 104 ntBASIC1.9□□□□□ -2.11
VPS33AQ96AX1 NFU1P2-201ENST00000448700 469 ntBASIC1.9□□□□□ -2.11
VPS33AQ96AX1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.9□□□□□ -2.11
VPS33AQ96AX1 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.9□□□□□ -2.11
VPS33AQ96AX1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.9□□□□□ -2.11
VPS33AQ96AX1 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.9□□□□□ -2.11
VPS33AQ96AX1 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.9□□□□□ -2.11
VPS33AQ96AX1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.9□□□□□ -2.11
VPS33AQ96AX1 AC083806.3-201ENST00000614016 455 ntBASIC1.9□□□□□ -2.11
VPS33AQ96AX1 RNU6-596P-201ENST00000365395 98 ntBASIC1.89□□□□□ -2.11
VPS33AQ96AX1 RNU6-245P-201ENST00000384020 107 ntBASIC1.89□□□□□ -2.11
VPS33AQ96AX1 MIR586-201ENST00000385035 97 ntBASIC1.89□□□□□ -2.11
VPS33AQ96AX1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
VPS33AQ96AX1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.89□□□□□ -2.11
VPS33AQ96AX1 EIF1P1-201ENST00000421436 341 ntBASIC1.89□□□□□ -2.11
VPS33AQ96AX1 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.89□□□□□ -2.11
VPS33AQ96AX1 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.89□□□□□ -2.11
VPS33AQ96AX1 AC074290.1-201ENST00000448883 135 ntBASIC1.89□□□□□ -2.11
VPS33AQ96AX1 AC092989.1-201ENST00000481235 277 ntBASIC1.89□□□□□ -2.11
VPS33AQ96AX1 RNU6-718P-201ENST00000516166 105 ntBASIC1.89□□□□□ -2.11
VPS33AQ96AX1 RNU6-344P-201ENST00000516635 111 ntBASIC1.89□□□□□ -2.11
VPS33AQ96AX1 RNA5SP454-201ENST00000517231 127 ntBASIC1.89□□□□□ -2.11
VPS33AQ96AX1 RRN3P3-201ENST00000549207 578 ntBASIC1.89□□□□□ -2.11
VPS33AQ96AX1 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.89□□□□□ -2.11
VPS33AQ96AX1 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.89□□□□□ -2.11
VPS33AQ96AX1 AL353149.1-201ENST00000610667 244 ntBASIC1.89□□□□□ -2.11
VPS33AQ96AX1 AC093913.1-201ENST00000614178 329 ntBASIC1.89□□□□□ -2.11
VPS33AQ96AX1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.89□□□□□ -2.11
VPS33AQ96AX1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
VPS33AQ96AX1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
VPS33AQ96AX1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
VPS33AQ96AX1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
VPS33AQ96AX1 RNU6-137P-201ENST00000363680 108 ntBASIC1.88□□□□□ -2.11
VPS33AQ96AX1 RNU6-975P-201ENST00000384296 105 ntBASIC1.88□□□□□ -2.11
VPS33AQ96AX1 SNORA67.3-201ENST00000384366 140 ntBASIC1.88□□□□□ -2.11
VPS33AQ96AX1 RNU6-1235P-201ENST00000384559 107 ntBASIC1.88□□□□□ -2.11
VPS33AQ96AX1 SNORA64-201ENST00000384674 134 ntBASIC1.88□□□□□ -2.11
VPS33AQ96AX1 MIR153-2-201ENST00000385225 87 ntBASIC1.88□□□□□ -2.11
VPS33AQ96AX1 RNA5SP489-201ENST00000410986 109 ntBASIC1.88□□□□□ -2.11
VPS33AQ96AX1 AC004866.1-201ENST00000411748 78 ntBASIC1.88□□□□□ -2.11
VPS33AQ96AX1 FCF1P9-201ENST00000412546 282 ntBASIC1.88□□□□□ -2.11
VPS33AQ96AX1 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.88□□□□□ -2.11
VPS33AQ96AX1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.88□□□□□ -2.11
VPS33AQ96AX1 MTND1P17-201ENST00000448961 204 ntBASIC1.88□□□□□ -2.11
VPS33AQ96AX1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.88□□□□□ -2.11
VPS33AQ96AX1 RNU6-498P-201ENST00000459468 107 ntBASIC1.88□□□□□ -2.11
VPS33AQ96AX1 HMGN2P9-201ENST00000476875 229 ntBASIC1.88□□□□□ -2.11
VPS33AQ96AX1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.88□□□□□ -2.11
VPS33AQ96AX1 RNU6-948P-201ENST00000516374 107 ntBASIC1.88□□□□□ -2.11
VPS33AQ96AX1 SNORA44.1-201ENST00000517031 108 ntBASIC1.88□□□□□ -2.11
VPS33AQ96AX1 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.88□□□□□ -2.11
VPS33AQ96AX1 AC010928.2-201ENST00000588017 287 ntBASIC1.88□□□□□ -2.11
VPS33AQ96AX1 AC018638.8-201ENST00000588755 281 ntBASIC1.88□□□□□ -2.11
VPS33AQ96AX1 AC002553.4-201ENST00000616896 331 ntBASIC1.88□□□□□ -2.11
VPS33AQ96AX1 AC008873.1-201ENST00000625051 138 ntBASIC1.88□□□□□ -2.11
VPS33AQ96AX1 ZNF204P-201ENST00000416749 2397 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
VPS33AQ96AX1 RNU6-661P-201ENST00000362409 107 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 Y_RNA.510-201ENST00000384511 114 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
VPS33AQ96AX1 RN7SKP32-201ENST00000410167 303 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 RNU2-2P-201ENST00000410396 191 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 AL139396.1-201ENST00000421137 167 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 snoU13.30-201ENST00000458951 104 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.87□□□□□ -2.11
VPS33AQ96AX1 AC010409.1-201ENST00000487382 476 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.87□□□□□ -2.11
VPS33AQ96AX1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.87□□□□□ -2.11
VPS33AQ96AX1 RNU6-566P-201ENST00000516790 107 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 RNU6-1088P-201ENST00000516850 104 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 MIR3198-2-201ENST00000577868 80 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 MIR5696-201ENST00000578474 85 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 MIR5094-201ENST00000578766 85 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.87□□□□□ -2.11
VPS33AQ96AX1 AC068790.6-201ENST00000602558 258 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 AC069114.2-201ENST00000604699 304 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 U2.15-201ENST00000611544 191 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 U2.16-201ENST00000613119 191 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 U2.12-201ENST00000613778 191 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 U2.20-201ENST00000613956 192 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 U2.9-201ENST00000615427 191 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 U2.11-201ENST00000616345 191 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 U2.2-201ENST00000616535 191 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 U2.3-201ENST00000617785 191 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 U2.19-201ENST00000618602 191 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 RNU2-1-201ENST00000618664 191 ntBASIC1.87□□□□□ -2.11
VPS33AQ96AX1 U2.6-201ENST00000619225 191 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms