Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 MIR2053-201ENST00000459295 91 ntBASIC1.66□□□□□ -2.14
LINC01006Q8NI28 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.66□□□□□ -2.14
LINC01006Q8NI28 AC097473.1-201ENST00000508142 408 ntBASIC1.66□□□□□ -2.14
LINC01006Q8NI28 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC01006Q8NI28 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.66□□□□□ -2.14
LINC01006Q8NI28 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.66□□□□□ -2.14
LINC01006Q8NI28 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.66□□□□□ -2.14
LINC01006Q8NI28 MIR5690-201ENST00000583739 73 ntBASIC1.66□□□□□ -2.14
LINC01006Q8NI28 AL137847.3-201ENST00000611521 109 ntBASIC1.66□□□□□ -2.14
LINC01006Q8NI28 AL359314.1-201ENST00000616913 261 ntBASIC1.66□□□□□ -2.14
LINC01006Q8NI28 AC126177.8-201ENST00000618339 1015 ntBASIC1.66□□□□□ -2.14
LINC01006Q8NI28 U4atac.1-201ENST00000618345 95 ntBASIC1.66□□□□□ -2.14
LINC01006Q8NI28 SCARNA4-201ENST00000629045 128 ntBASIC1.66□□□□□ -2.14
LINC01006Q8NI28 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.66□□□□□ -2.14
LINC01006Q8NI28 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
LINC01006Q8NI28 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
LINC01006Q8NI28 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC01006Q8NI28 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
LINC01006Q8NI28 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.66□□□□□ -2.14
LINC01006Q8NI28 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
LINC01006Q8NI28 AC007336.1-201ENST00000576365 3828 ntBASIC1.65□□□□□ -2.14
LINC01006Q8NI28 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.65□□□□□ -2.15
LINC01006Q8NI28 RNY1P16-201ENST00000363063 111 ntBASIC1.65□□□□□ -2.15
LINC01006Q8NI28 Y_RNA.315-201ENST00000365117 102 ntBASIC1.65□□□□□ -2.15
LINC01006Q8NI28 RNA5SP240-201ENST00000365355 128 ntBASIC1.65□□□□□ -2.15
LINC01006Q8NI28 RNU1-52P-201ENST00000384190 164 ntBASIC1.65□□□□□ -2.15
LINC01006Q8NI28 Y_RNA.579-201ENST00000390939 94 ntBASIC1.65□□□□□ -2.15
LINC01006Q8NI28 SNORA75.6-201ENST00000391318 127 ntBASIC1.65□□□□□ -2.15
LINC01006Q8NI28 SNORA26.9-201ENST00000391322 122 ntBASIC1.65□□□□□ -2.15
LINC01006Q8NI28 MIR208B-201ENST00000401172 77 ntBASIC1.65□□□□□ -2.15
LINC01006Q8NI28 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.65□□□□□ -2.15
LINC01006Q8NI28 Y_RNA.597-201ENST00000410463 100 ntBASIC1.65□□□□□ -2.15
LINC01006Q8NI28 MTCO2P27-201ENST00000420740 428 ntBASIC1.65□□□□□ -2.15
LINC01006Q8NI28 SUMO1P4-201ENST00000429430 302 ntBASIC1.65□□□□□ -2.15
LINC01006Q8NI28 AL445305.1-201ENST00000432577 575 ntBASIC1.65□□□□□ -2.15
LINC01006Q8NI28 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC01006Q8NI28 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.65□□□□□ -2.15
LINC01006Q8NI28 ELOCP24-201ENST00000456370 334 ntBASIC1.65□□□□□ -2.15
LINC01006Q8NI28 TOMM22P6-201ENST00000465035 409 ntBASIC1.65□□□□□ -2.15
LINC01006Q8NI28 AC022493.2-201ENST00000506122 481 ntBASIC1.65□□□□□ -2.15
LINC01006Q8NI28 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.65□□□□□ -2.15
LINC01006Q8NI28 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC01006Q8NI28 MIR449C-201ENST00000516047 92 ntBASIC1.65□□□□□ -2.15
LINC01006Q8NI28 RNA5SP402-201ENST00000517148 110 ntBASIC1.65□□□□□ -2.15
LINC01006Q8NI28 RNU6-586P-201ENST00000517265 104 ntBASIC1.65□□□□□ -2.15
LINC01006Q8NI28 RNU1-104P-201ENST00000517280 175 ntBASIC1.65□□□□□ -2.15
LINC01006Q8NI28 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC01006Q8NI28 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.65□□□□□ -2.15
LINC01006Q8NI28 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.65□□□□□ -2.15
LINC01006Q8NI28 FO624990.1-201ENST00000636373 85 ntBASIC1.65□□□□□ -2.15
LINC01006Q8NI28 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.65□□□□□ -2.15
LINC01006Q8NI28 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
LINC01006Q8NI28 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
LINC01006Q8NI28 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
LINC01006Q8NI28 RNU6-874P-201ENST00000362390 105 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 RNU6-1159P-201ENST00000362933 107 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 RNU4-9P-201ENST00000364951 139 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 Y_RNA.405-201ENST00000383979 100 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 Y_RNA.451-201ENST00000384200 100 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 U8.10-201ENST00000384260 133 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 Y_RNA.524-201ENST00000384564 100 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 Y_RNA.561-201ENST00000384694 100 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 MIR32-201ENST00000384965 70 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 MIR95-201ENST00000385072 81 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 MIR559-201ENST00000385188 96 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 AC019129.1-201ENST00000403786 261 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 MTCYBP2-201ENST00000407745 171 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC01006Q8NI28 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC01006Q8NI28 AC236972.2-201ENST00000434979 310 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 AL161788.1-201ENST00000441805 169 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 AC007677.1-201ENST00000445757 515 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 RNU7-152P-201ENST00000458982 64 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 CKS1BP2-201ENST00000497342 240 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.64□□□□□ -2.15
LINC01006Q8NI28 AC093303.1-201ENST00000514549 295 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 SNORA31.11-201ENST00000516528 139 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 RNU6-965P-201ENST00000516721 96 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC01006Q8NI28 DEFB131C-201ENST00000528817 165 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.64□□□□□ -2.15
LINC01006Q8NI28 AC016256.1-201ENST00000547971 354 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 CYP4A27P-201ENST00000567218 190 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 MIR5701-3-201ENST00000578890 82 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 MIR3923-201ENST00000579521 83 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 MIR5701-1-201ENST00000585138 82 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC01006Q8NI28 AL049779.4-201ENST00000604500 156 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 PCGEM1.1-201ENST00000613431 131 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 MIR5701-2-201ENST00000615634 82 ntBASIC1.64□□□□□ -2.15
LINC01006Q8NI28 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.64□□□□□ -2.15
LINC01006Q8NI28 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
LINC01006Q8NI28 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.63□□□□□ -2.15
LINC01006Q8NI28 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
LINC01006Q8NI28 SNORD32B-201ENST00000364460 84 ntBASIC1.63□□□□□ -2.15
LINC01006Q8NI28 RNU4-56P-201ENST00000364700 142 ntBASIC1.63□□□□□ -2.15
LINC01006Q8NI28 RNU6-99P-201ENST00000364721 107 ntBASIC1.63□□□□□ -2.15
LINC01006Q8NI28 MIR29B2-201ENST00000385055 81 ntBASIC1.63□□□□□ -2.15
LINC01006Q8NI28 RNU6-1093P-201ENST00000391194 107 ntBASIC1.63□□□□□ -2.15
LINC01006Q8NI28 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms