Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.1□□□□□ -1.91
PRPF38AQ8NAV1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PRPF38AQ8NAV1 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRPF38AQ8NAV1 SNORA25B-201ENST00000365507 128 ntBASIC3.1□□□□□ -1.91
PRPF38AQ8NAV1 MIR181A2-201ENST00000384863 110 ntBASIC3.1□□□□□ -1.91
PRPF38AQ8NAV1 AC114482.1-201ENST00000418010 247 ntBASIC3.1□□□□□ -1.91
PRPF38AQ8NAV1 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.1□□□□□ -1.91
PRPF38AQ8NAV1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.1□□□□□ -1.91
PRPF38AQ8NAV1 AC105758.1-201ENST00000506038 399 ntBASIC3.1□□□□□ -1.91
PRPF38AQ8NAV1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.1□□□□□ -1.91
PRPF38AQ8NAV1 uc_338.22-201ENST00000622722 187 ntBASIC3.1□□□□□ -1.91
PRPF38AQ8NAV1 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PRPF38AQ8NAV1 MTND5P16-201ENST00000460269 1703 ntBASIC3.1□□□□□ -1.91
PRPF38AQ8NAV1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PRPF38AQ8NAV1 Y_RNA.39-201ENST00000362620 98 ntBASIC3.09□□□□□ -1.91
PRPF38AQ8NAV1 AC018865.2-201ENST00000423631 129 ntBASIC3.09□□□□□ -1.91
PRPF38AQ8NAV1 MTND1P14-201ENST00000427400 950 ntBASIC3.09□□□□□ -1.91
PRPF38AQ8NAV1 AC027124.2-201ENST00000428249 105 ntBASIC3.09□□□□□ -1.91
PRPF38AQ8NAV1 AL137792.2-201ENST00000443484 235 ntBASIC3.09□□□□□ -1.91
PRPF38AQ8NAV1 AP000870.1-201ENST00000472927 406 ntBASIC3.09□□□□□ -1.91
PRPF38AQ8NAV1 RN7SL297P-201ENST00000483161 293 ntBASIC3.09□□□□□ -1.91
PRPF38AQ8NAV1 RPS23P5-201ENST00000495419 428 ntBASIC3.09□□□□□ -1.91
PRPF38AQ8NAV1 RNU5F-4P-201ENST00000516581 114 ntBASIC3.09□□□□□ -1.91
PRPF38AQ8NAV1 ELOCP31-201ENST00000540463 467 ntBASIC3.09□□□□□ -1.91
PRPF38AQ8NAV1 MIR4719-201ENST00000585233 84 ntBASIC3.09□□□□□ -1.91
PRPF38AQ8NAV1 MIR6817-201ENST00000615588 66 ntBASIC3.09□□□□□ -1.91
PRPF38AQ8NAV1 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.09□□□□□ -1.92
PRPF38AQ8NAV1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
PRPF38AQ8NAV1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PRPF38AQ8NAV1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
PRPF38AQ8NAV1 Z82195.2-201ENST00000612348 18351 ntBASIC3.08□□□□□ -1.92
PRPF38AQ8NAV1 Y_RNA.5-201ENST00000362334 102 ntBASIC3.08□□□□□ -1.92
PRPF38AQ8NAV1 VTRNA1-1-201ENST00000363120 99 ntBASIC3.08□□□□□ -1.92
PRPF38AQ8NAV1 RNU6-611P-201ENST00000384276 104 ntBASIC3.08□□□□□ -1.92
PRPF38AQ8NAV1 RNU1-148P-201ENST00000384472 162 ntBASIC3.08□□□□□ -1.92
PRPF38AQ8NAV1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.08□□□□□ -1.92
PRPF38AQ8NAV1 SNORA9.3-201ENST00000516383 129 ntBASIC3.08□□□□□ -1.92
PRPF38AQ8NAV1 RNU6-911P-201ENST00000516523 104 ntBASIC3.08□□□□□ -1.92
PRPF38AQ8NAV1 RNU6-667P-201ENST00000517186 102 ntBASIC3.08□□□□□ -1.92
PRPF38AQ8NAV1 MIR4446-201ENST00000578505 67 ntBASIC3.08□□□□□ -1.92
PRPF38AQ8NAV1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.08□□□□□ -1.92
PRPF38AQ8NAV1 AC091925.1-201ENST00000623204 462 ntBASIC3.08□□□□□ -1.92
PRPF38AQ8NAV1 RNU1-76P-201ENST00000362903 159 ntBASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 RNU6-234P-201ENST00000365229 104 ntBASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 Y_RNA.358-201ENST00000365491 99 ntBASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 SNORA18.2-201ENST00000383865 132 ntBASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 MIR628-201ENST00000385229 95 ntBASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 AL357139.1-201ENST00000407792 426 ntBASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 MIR548P-201ENST00000408336 84 ntBASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 RNU2-48P-201ENST00000410694 191 ntBASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 MRPS18CP6-201ENST00000423587 223 ntBASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 AC005534.2-201ENST00000431047 433 ntBASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 AL513328.1-201ENST00000446460 224 ntBASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 MIR449C-201ENST00000516047 92 ntBASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 RNA5SP282-201ENST00000516355 108 ntBASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 RNA5SP148-201ENST00000516527 94 ntBASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 AC004486.1-201ENST00000546846 233 ntBASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 AC005296.1-201ENST00000616145 209 ntBASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 AC022140.2-201ENST00000623500 188 ntBASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PRPF38AQ8NAV1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 RNU6-1011P-201ENST00000384668 107 ntBASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 AL139095.1-201ENST00000404326 391 ntBASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 Y_RNA.592-201ENST00000410274 109 ntBASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 AC004386.2-201ENST00000441858 148 ntBASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 AC007677.1-201ENST00000445757 515 ntBASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 AC009237.7-201ENST00000447357 229 ntBASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 SNORA4.4-201ENST00000515921 135 ntBASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 SNORA25.14-201ENST00000516481 132 ntBASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 RNU2-44P-201ENST00000516795 194 ntBASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 RNU6-988P-201ENST00000519081 107 ntBASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 AC034114.1-201ENST00000520293 285 ntBASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 AL442663.2-201ENST00000554385 511 ntBASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 MIR4435-1-201ENST00000582552 80 ntBASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 MIR5006-201ENST00000583027 110 ntBASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 AC087588.2-201ENST00000617667 426 ntBASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PRPF38AQ8NAV1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.05□□□□□ -1.92
PRPF38AQ8NAV1 RNU6-874P-201ENST00000362390 105 ntBASIC3.05□□□□□ -1.92
PRPF38AQ8NAV1 RNU1-62P-201ENST00000362599 164 ntBASIC3.05□□□□□ -1.92
PRPF38AQ8NAV1 RNU6-873P-201ENST00000363833 107 ntBASIC3.05□□□□□ -1.92
PRPF38AQ8NAV1 RNU6-694P-201ENST00000364071 147 ntBASIC3.05□□□□□ -1.92
PRPF38AQ8NAV1 SNORA25.6-201ENST00000364121 118 ntBASIC3.05□□□□□ -1.92
PRPF38AQ8NAV1 RNU6-1227P-201ENST00000383981 107 ntBASIC3.05□□□□□ -1.92
PRPF38AQ8NAV1 RNU6-1026P-201ENST00000384465 108 ntBASIC3.05□□□□□ -1.92
PRPF38AQ8NAV1 MIR592-201ENST00000384959 97 ntBASIC3.05□□□□□ -1.92
PRPF38AQ8NAV1 MIR487A-201ENST00000385009 80 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 160 ms