Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 DEFB108E-201ENST00000524692 240 ntBASIC0.68□□□□□ -2.3
CNEP1R1Q8N9A8 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.68□□□□□ -2.3
CNEP1R1Q8N9A8 AC133485.1-201ENST00000567176 124 ntBASIC0.68□□□□□ -2.3
CNEP1R1Q8N9A8 AC138907.6-201ENST00000568401 126 ntBASIC0.68□□□□□ -2.3
CNEP1R1Q8N9A8 AL022161.1-201ENST00000604390 213 ntBASIC0.68□□□□□ -2.3
CNEP1R1Q8N9A8 AC106800.4-201ENST00000614905 153 ntBASIC0.68□□□□□ -2.3
CNEP1R1Q8N9A8 AC012676.2-201ENST00000619258 186 ntBASIC0.68□□□□□ -2.3
CNEP1R1Q8N9A8 SEPT14P19-203ENST00000633205 211 ntBASIC0.68□□□□□ -2.3
CNEP1R1Q8N9A8 AC068647.2-201ENST00000637380 353 ntBASIC0.68□□□□□ -2.3
CNEP1R1Q8N9A8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CNEP1R1Q8N9A8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.67□□□□□ -2.3
CNEP1R1Q8N9A8 RNU6-1123P-201ENST00000362347 106 ntBASIC0.67□□□□□ -2.3
CNEP1R1Q8N9A8 SNORA33-201ENST00000363664 130 ntBASIC0.67□□□□□ -2.3
CNEP1R1Q8N9A8 SNORA72.2-201ENST00000365028 127 ntBASIC0.67□□□□□ -2.3
CNEP1R1Q8N9A8 RNA5SP259-201ENST00000365541 109 ntBASIC0.67□□□□□ -2.3
CNEP1R1Q8N9A8 RNU6-434P-201ENST00000384376 107 ntBASIC0.67□□□□□ -2.3
CNEP1R1Q8N9A8 RNU6-1127P-201ENST00000384580 107 ntBASIC0.67□□□□□ -2.3
CNEP1R1Q8N9A8 SNORA16.2-201ENST00000390991 127 ntBASIC0.67□□□□□ -2.3
CNEP1R1Q8N9A8 MIR1283-1-201ENST00000408494 87 ntBASIC0.67□□□□□ -2.3
CNEP1R1Q8N9A8 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.67□□□□□ -2.3
CNEP1R1Q8N9A8 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.67□□□□□ -2.3
CNEP1R1Q8N9A8 RNU7-34P-201ENST00000459394 64 ntBASIC0.67□□□□□ -2.3
CNEP1R1Q8N9A8 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.67□□□□□ -2.3
CNEP1R1Q8N9A8 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.67□□□□□ -2.3
CNEP1R1Q8N9A8 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.67□□□□□ -2.3
CNEP1R1Q8N9A8 AL020996.3-201ENST00000606617 222 ntBASIC0.67□□□□□ -2.3
CNEP1R1Q8N9A8 AC002044.1-201ENST00000606707 158 ntBASIC0.67□□□□□ -2.3
CNEP1R1Q8N9A8 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.67□□□□□ -2.3
CNEP1R1Q8N9A8 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.67□□□□□ -2.3
CNEP1R1Q8N9A8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
CNEP1R1Q8N9A8 RNU6-1214P-201ENST00000363650 109 ntBASIC0.66□□□□□ -2.3
CNEP1R1Q8N9A8 RNY4P34-201ENST00000364779 95 ntBASIC0.66□□□□□ -2.3
CNEP1R1Q8N9A8 RNU6-108P-201ENST00000365558 107 ntBASIC0.66□□□□□ -2.3
CNEP1R1Q8N9A8 RNU6-925P-201ENST00000384629 104 ntBASIC0.66□□□□□ -2.3
CNEP1R1Q8N9A8 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
CNEP1R1Q8N9A8 MIR1-2-201ENST00000384961 85 ntBASIC0.66□□□□□ -2.3
CNEP1R1Q8N9A8 SNORD70.1-201ENST00000391007 85 ntBASIC0.66□□□□□ -2.3
CNEP1R1Q8N9A8 RPS3AP3-201ENST00000411933 242 ntBASIC0.66□□□□□ -2.3
CNEP1R1Q8N9A8 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.66□□□□□ -2.3
CNEP1R1Q8N9A8 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.66□□□□□ -2.3
CNEP1R1Q8N9A8 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.66□□□□□ -2.3
CNEP1R1Q8N9A8 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.66□□□□□ -2.3
CNEP1R1Q8N9A8 RPS29P15-201ENST00000458329 171 ntBASIC0.66□□□□□ -2.3
CNEP1R1Q8N9A8 AC010486.2-201ENST00000505572 483 ntBASIC0.66□□□□□ -2.3
CNEP1R1Q8N9A8 RNU6-165P-201ENST00000517170 99 ntBASIC0.66□□□□□ -2.3
CNEP1R1Q8N9A8 MRPS36P3-201ENST00000519284 130 ntBASIC0.66□□□□□ -2.3
CNEP1R1Q8N9A8 MTCO3P23-201ENST00000561363 289 ntBASIC0.66□□□□□ -2.3
CNEP1R1Q8N9A8 MIR4714-201ENST00000580728 77 ntBASIC0.66□□□□□ -2.3
CNEP1R1Q8N9A8 AC009509.4-201ENST00000619202 509 ntBASIC0.66□□□□□ -2.3
CNEP1R1Q8N9A8 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.66□□□□□ -2.3
CNEP1R1Q8N9A8 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 snoU2-30.2-201ENST00000362805 70 ntBASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 RNU6-1097P-201ENST00000363586 107 ntBASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 RNU6-266P-201ENST00000364225 107 ntBASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 RNU4-28P-201ENST00000364739 141 ntBASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 RNU6-1093P-201ENST00000391194 107 ntBASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 RNU6-195P-201ENST00000411352 109 ntBASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 AL593851.1-201ENST00000426171 157 ntBASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 HMGN1P12-201ENST00000499125 195 ntBASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 AC079140.5-201ENST00000507882 310 ntBASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 AGGF1P4-201ENST00000568249 801 ntBASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 MIR4703-201ENST00000577728 79 ntBASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 MIR4753-201ENST00000585119 83 ntBASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 RSL24D1P11-201ENST00000591045 491 ntBASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 AL391646.1-201ENST00000603860 190 ntBASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 AL590095.2-201ENST00000604136 117 ntBASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 uc_338.11-201ENST00000619132 160 ntBASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 MTND4P4-201ENST00000439033 1366 ntBASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.65□□□□□ -2.31
CNEP1R1Q8N9A8 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.64□□□□□ -2.31
CNEP1R1Q8N9A8 Y_RNA.354-201ENST00000365448 111 ntBASIC0.64□□□□□ -2.31
CNEP1R1Q8N9A8 RNU6-1235P-201ENST00000384559 107 ntBASIC0.64□□□□□ -2.31
CNEP1R1Q8N9A8 MTND3P17-201ENST00000416968 344 ntBASIC0.64□□□□□ -2.31
CNEP1R1Q8N9A8 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.64□□□□□ -2.31
CNEP1R1Q8N9A8 AC090960.1-201ENST00000421072 306 ntBASIC0.64□□□□□ -2.31
CNEP1R1Q8N9A8 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.64□□□□□ -2.31
CNEP1R1Q8N9A8 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.64□□□□□ -2.31
CNEP1R1Q8N9A8 AC009961.2-201ENST00000435771 251 ntBASIC0.64□□□□□ -2.31
CNEP1R1Q8N9A8 HMGN2P34-201ENST00000437647 269 ntBASIC0.64□□□□□ -2.31
CNEP1R1Q8N9A8 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.64□□□□□ -2.31
CNEP1R1Q8N9A8 AC016717.1-201ENST00000448918 286 ntBASIC0.64□□□□□ -2.31
CNEP1R1Q8N9A8 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.64□□□□□ -2.31
CNEP1R1Q8N9A8 RNU6-498P-201ENST00000459468 107 ntBASIC0.64□□□□□ -2.31
CNEP1R1Q8N9A8 RPL39P28-201ENST00000465655 155 ntBASIC0.64□□□□□ -2.31
CNEP1R1Q8N9A8 AC117454.1-201ENST00000491120 168 ntBASIC0.64□□□□□ -2.31
CNEP1R1Q8N9A8 MTND3P3-201ENST00000505004 126 ntBASIC0.64□□□□□ -2.31
CNEP1R1Q8N9A8 RNU6-948P-201ENST00000516374 107 ntBASIC0.64□□□□□ -2.31
CNEP1R1Q8N9A8 SUMO2P16-201ENST00000519475 264 ntBASIC0.64□□□□□ -2.31
CNEP1R1Q8N9A8 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.64□□□□□ -2.31
CNEP1R1Q8N9A8 TPRKBP2-201ENST00000565969 475 ntBASIC0.64□□□□□ -2.31
CNEP1R1Q8N9A8 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.64□□□□□ -2.31
CNEP1R1Q8N9A8 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.64□□□□□ -2.31
CNEP1R1Q8N9A8 MIR3682-201ENST00000581338 84 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms