Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 CBX3P6-201ENST00000430257 527 ntBASIC3.23□□□□□ -1.89
SYNPOQ8N3V7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.23□□□□□ -1.89
SYNPOQ8N3V7 AC025750.2-201ENST00000442609 450 ntBASIC3.23□□□□□ -1.89
SYNPOQ8N3V7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.23□□□□□ -1.89
SYNPOQ8N3V7 IFNA11P-201ENST00000446352 526 ntBASIC3.23□□□□□ -1.89
SYNPOQ8N3V7 HMGN1P18-201ENST00000457642 277 ntBASIC3.23□□□□□ -1.89
SYNPOQ8N3V7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.23□□□□□ -1.89
SYNPOQ8N3V7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.23□□□□□ -1.89
SYNPOQ8N3V7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.23□□□□□ -1.89
SYNPOQ8N3V7 RNU6-408P-201ENST00000515910 100 ntBASIC3.23□□□□□ -1.89
SYNPOQ8N3V7 RNU6-1098P-201ENST00000516772 96 ntBASIC3.23□□□□□ -1.89
SYNPOQ8N3V7 MIR4672-201ENST00000583126 81 ntBASIC3.23□□□□□ -1.89
SYNPOQ8N3V7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SYNPOQ8N3V7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SYNPOQ8N3V7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.23□□□□□ -1.89
SYNPOQ8N3V7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SYNPOQ8N3V7 RNU1-62P-201ENST00000362599 164 ntBASIC3.22□□□□□ -1.89
SYNPOQ8N3V7 RNU1-23P-201ENST00000363361 144 ntBASIC3.22□□□□□ -1.89
SYNPOQ8N3V7 Y_RNA.143-201ENST00000363520 106 ntBASIC3.22□□□□□ -1.89
SYNPOQ8N3V7 Y_RNA.193-201ENST00000363979 102 ntBASIC3.22□□□□□ -1.89
SYNPOQ8N3V7 RNU6-1145P-201ENST00000384246 107 ntBASIC3.22□□□□□ -1.89
SYNPOQ8N3V7 SNORD15B-201ENST00000384714 146 ntBASIC3.22□□□□□ -1.89
SYNPOQ8N3V7 AC004866.1-201ENST00000411748 78 ntBASIC3.22□□□□□ -1.89
SYNPOQ8N3V7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.22□□□□□ -1.89
SYNPOQ8N3V7 AC104332.2-201ENST00000429959 156 ntBASIC3.22□□□□□ -1.89
SYNPOQ8N3V7 AC009237.7-201ENST00000447357 229 ntBASIC3.22□□□□□ -1.89
SYNPOQ8N3V7 PCNPP5-201ENST00000452246 481 ntBASIC3.22□□□□□ -1.89
SYNPOQ8N3V7 SNORA40.9-201ENST00000515895 93 ntBASIC3.22□□□□□ -1.89
SYNPOQ8N3V7 RNU6-1012P-201ENST00000516606 109 ntBASIC3.22□□□□□ -1.89
SYNPOQ8N3V7 RNU6-897P-201ENST00000517135 105 ntBASIC3.22□□□□□ -1.89
SYNPOQ8N3V7 AC093331.1-201ENST00000521474 169 ntBASIC3.22□□□□□ -1.89
SYNPOQ8N3V7 AC004817.2-201ENST00000561794 651 ntBASIC3.22□□□□□ -1.89
SYNPOQ8N3V7 UBL5P2-201ENST00000583788 219 ntBASIC3.22□□□□□ -1.89
SYNPOQ8N3V7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.22□□□□□ -1.89
SYNPOQ8N3V7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SYNPOQ8N3V7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.22□□□□□ -1.89
SYNPOQ8N3V7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.22□□□□□ -1.89
SYNPOQ8N3V7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.21□□□□□ -1.89
SYNPOQ8N3V7 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 Y_RNA.149-201ENST00000363558 117 ntBASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 Y_RNA.415-201ENST00000384012 112 ntBASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 RNU6-505P-201ENST00000384427 107 ntBASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 Y_RNA.498-201ENST00000384460 102 ntBASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 RNU6-713P-201ENST00000384761 107 ntBASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 RNU2-20P-201ENST00000410425 191 ntBASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 RNA5SP229-201ENST00000410809 99 ntBASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 AL731563.1-201ENST00000442202 214 ntBASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 DYNLT3P2-201ENST00000442517 295 ntBASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 AC104389.3-201ENST00000445629 235 ntBASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 EEF1B2P7-201ENST00000451177 676 ntBASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 AC067942.3-201ENST00000512025 362 ntBASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 AC104027.1-201ENST00000521887 300 ntBASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 SNORD11B-201ENST00000607707 90 ntBASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 AL357075.2-201ENST00000614906 189 ntBASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SYNPOQ8N3V7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 Y_RNA.47-201ENST00000362697 108 ntBASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 RNU6-1305P-201ENST00000364353 104 ntBASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 SNORD87-201ENST00000364849 89 ntBASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 RNU6-234P-201ENST00000365229 104 ntBASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 Y_RNA.401-201ENST00000383965 117 ntBASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 AL079342.1-201ENST00000401460 267 ntBASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 RN7SL429P-201ENST00000479090 223 ntBASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 RN7SL489P-201ENST00000486185 223 ntBASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 RN7SL327P-201ENST00000488659 223 ntBASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 Y_RNA.713-201ENST00000517013 96 ntBASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 RN7SKP40-201ENST00000517211 242 ntBASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 SNORA31.26-201ENST00000517250 137 ntBASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 MIR3162-201ENST00000581818 82 ntBASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 ELOCP29-201ENST00000588193 334 ntBASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 uc_338.25-201ENST00000613756 156 ntBASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 RN7SL853P-201ENST00000617250 223 ntBASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SYNPOQ8N3V7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SYNPOQ8N3V7 Y_RNA.19-201ENST00000362462 99 ntBASIC3.19□□□□□ -1.9
SYNPOQ8N3V7 RNU6-438P-201ENST00000365561 103 ntBASIC3.19□□□□□ -1.9
SYNPOQ8N3V7 Y_RNA.512-201ENST00000384518 102 ntBASIC3.19□□□□□ -1.9
SYNPOQ8N3V7 RNU6-907P-201ENST00000390924 102 ntBASIC3.19□□□□□ -1.9
SYNPOQ8N3V7 AL031121.1-201ENST00000406553 254 ntBASIC3.19□□□□□ -1.9
SYNPOQ8N3V7 RNU6-130P-201ENST00000411112 103 ntBASIC3.19□□□□□ -1.9
SYNPOQ8N3V7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.19□□□□□ -1.9
SYNPOQ8N3V7 AC007395.1-201ENST00000451333 677 ntBASIC3.19□□□□□ -1.9
SYNPOQ8N3V7 RNU6-625P-201ENST00000459412 107 ntBASIC3.19□□□□□ -1.9
SYNPOQ8N3V7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms