Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC034229.5-201ENST00000624258 185 ntBASIC3.42□□□□□ -1.86
ATG4DQ86TL0 AC068205.3-201ENST00000636385 468 ntBASIC3.42□□□□□ -1.86
ATG4DQ86TL0 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.42□□□□□ -1.86
ATG4DQ86TL0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ATG4DQ86TL0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ATG4DQ86TL0 MFSD8-236ENST00000641509 4050 ntBASIC3.42□□□□□ -1.86
ATG4DQ86TL0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
ATG4DQ86TL0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATG4DQ86TL0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ATG4DQ86TL0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATG4DQ86TL0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.41□□□□□ -1.86
ATG4DQ86TL0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATG4DQ86TL0 Y_RNA.120-201ENST00000363304 110 ntBASIC3.41□□□□□ -1.86
ATG4DQ86TL0 SNORA73.2-201ENST00000364946 201 ntBASIC3.41□□□□□ -1.86
ATG4DQ86TL0 RNU6-1181P-201ENST00000384191 106 ntBASIC3.41□□□□□ -1.86
ATG4DQ86TL0 RNU6-880P-201ENST00000384526 107 ntBASIC3.41□□□□□ -1.86
ATG4DQ86TL0 RNA5SP424-201ENST00000390988 115 ntBASIC3.41□□□□□ -1.86
ATG4DQ86TL0 SNORA36B-201ENST00000410438 131 ntBASIC3.41□□□□□ -1.86
ATG4DQ86TL0 RNY4P29-201ENST00000410801 97 ntBASIC3.41□□□□□ -1.86
ATG4DQ86TL0 AC006028.1-201ENST00000438379 402 ntBASIC3.41□□□□□ -1.86
ATG4DQ86TL0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.41□□□□□ -1.86
ATG4DQ86TL0 Y_RNA.649-201ENST00000459077 103 ntBASIC3.41□□□□□ -1.86
ATG4DQ86TL0 RNU5F-2P-201ENST00000516066 82 ntBASIC3.41□□□□□ -1.86
ATG4DQ86TL0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.41□□□□□ -1.86
ATG4DQ86TL0 AC025281.1-201ENST00000567026 265 ntBASIC3.41□□□□□ -1.86
ATG4DQ86TL0 AC087499.8-201ENST00000578406 226 ntBASIC3.41□□□□□ -1.86
ATG4DQ86TL0 MIR3923-201ENST00000579521 83 ntBASIC3.41□□□□□ -1.86
ATG4DQ86TL0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.41□□□□□ -1.86
ATG4DQ86TL0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.41□□□□□ -1.86
ATG4DQ86TL0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.41□□□□□ -1.86
ATG4DQ86TL0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATG4DQ86TL0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATG4DQ86TL0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
ATG4DQ86TL0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
ATG4DQ86TL0 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.86
ATG4DQ86TL0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
ATG4DQ86TL0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
ATG4DQ86TL0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
ATG4DQ86TL0 SNORD6-201ENST00000365444 73 ntBASIC3.4□□□□□ -1.87
ATG4DQ86TL0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
ATG4DQ86TL0 RNY3P5-201ENST00000384127 102 ntBASIC3.4□□□□□ -1.87
ATG4DQ86TL0 RNU6-905P-201ENST00000384434 107 ntBASIC3.4□□□□□ -1.87
ATG4DQ86TL0 SNORA79-201ENST00000408376 140 ntBASIC3.4□□□□□ -1.87
ATG4DQ86TL0 RNU6ATAC-201ENST00000408749 126 ntBASIC3.4□□□□□ -1.87
ATG4DQ86TL0 RN7SKP156-201ENST00000410308 342 ntBASIC3.4□□□□□ -1.87
ATG4DQ86TL0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.4□□□□□ -1.87
ATG4DQ86TL0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.4□□□□□ -1.87
ATG4DQ86TL0 RN7SKP83-201ENST00000516512 178 ntBASIC3.4□□□□□ -1.87
ATG4DQ86TL0 RNA5SP309-201ENST00000516670 106 ntBASIC3.4□□□□□ -1.87
ATG4DQ86TL0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.4□□□□□ -1.87
ATG4DQ86TL0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.4□□□□□ -1.87
ATG4DQ86TL0 MIR4644-201ENST00000579929 84 ntBASIC3.4□□□□□ -1.87
ATG4DQ86TL0 AC012531.5-201ENST00000611375 151 ntBASIC3.4□□□□□ -1.87
ATG4DQ86TL0 MIR548AY-201ENST00000617669 107 ntBASIC3.4□□□□□ -1.87
ATG4DQ86TL0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
ATG4DQ86TL0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.4□□□□□ -1.87
ATG4DQ86TL0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
ATG4DQ86TL0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ATG4DQ86TL0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ATG4DQ86TL0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
ATG4DQ86TL0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.39□□□□□ -1.87
ATG4DQ86TL0 SNORA71.3-201ENST00000362582 128 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 RNU6-978P-201ENST00000364371 103 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 RNU6-294P-201ENST00000364999 102 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 Y_RNA.361-201ENST00000365515 120 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 MIR124-3-201ENST00000384866 87 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 SNORA26.2-201ENST00000390922 122 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 Y_RNA.587-201ENST00000391210 103 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 PTMAP2-201ENST00000397627 327 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 MIR1278-201ENST00000408753 81 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 Y_RNA.617-201ENST00000410920 90 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.39□□□□□ -1.87
ATG4DQ86TL0 TOMM22P2-201ENST00000430735 237 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.39□□□□□ -1.87
ATG4DQ86TL0 AC091153.1-201ENST00000466297 402 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 RPS26P45-201ENST00000471748 340 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 SNORA70.14-201ENST00000516205 110 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 RNU7-115P-201ENST00000516433 55 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 RNU6-344P-201ENST00000516635 111 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 RNU6-1282P-201ENST00000516735 96 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 ACA59.2-201ENST00000517061 156 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.39□□□□□ -1.87
ATG4DQ86TL0 IGKV2D-19-201ENST00000523346 262 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 MIR4444-1-201ENST00000581696 74 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 MIR5006-201ENST00000583027 110 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 MIR3136-201ENST00000583498 78 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 MIR4444-2-201ENST00000584390 74 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 AC005562.2-201ENST00000618264 111 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 AC244205.2-202ENST00000635781 342 ntBASIC3.39□□□□□ -1.87
ATG4DQ86TL0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ATG4DQ86TL0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ATG4DQ86TL0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.38□□□□□ -1.87
ATG4DQ86TL0 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ATG4DQ86TL0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.38□□□□□ -1.87
ATG4DQ86TL0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ATG4DQ86TL0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ATG4DQ86TL0 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ATG4DQ86TL0 SNORD114-19-201ENST00000363072 75 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms