Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-1.01□□□□□ -2.57
VPS13CQ709C8 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-1.01□□□□□ -2.57
VPS13CQ709C8 AC134698.4-201ENST00000523451 826 ntBASIC-1.01□□□□□ -2.57
VPS13CQ709C8 NDUFA8P1-201ENST00000605525 367 ntBASIC-1.01□□□□□ -2.57
VPS13CQ709C8 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-1.01□□□□□ -2.57
VPS13CQ709C8 MIR148A-201ENST00000362215 68 ntBASIC-1.01□□□□□ -2.57
VPS13CQ709C8 AL133264.1-201ENST00000407157 562 ntBASIC-1.01□□□□□ -2.57
VPS13CQ709C8 USP9YP11-201ENST00000427537 717 ntBASIC-1.01□□□□□ -2.57
VPS13CQ709C8 AL500527.2-201ENST00000454105 95 ntBASIC-1.01□□□□□ -2.57
VPS13CQ709C8 RNU6-428P-201ENST00000362942 107 ntBASIC-1.02□□□□□ -2.57
VPS13CQ709C8 RNU6-226P-201ENST00000363778 107 ntBASIC-1.02□□□□□ -2.57
VPS13CQ709C8 AC245047.8-201ENST00000456455 284 ntBASIC-1.02□□□□□ -2.57
VPS13CQ709C8 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.02□□□□□ -2.57
VPS13CQ709C8 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC-1.02□□□□□ -2.57
VPS13CQ709C8 MIR3167-201ENST00000579623 85 ntBASIC-1.02□□□□□ -2.57
VPS13CQ709C8 MIR1827-201ENST00000408549 66 ntBASIC-1.02□□□□□ -2.57
VPS13CQ709C8 RNU6-712P-201ENST00000410558 100 ntBASIC-1.02□□□□□ -2.57
VPS13CQ709C8 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-1.02□□□□□ -2.57
VPS13CQ709C8 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-1.02□□□□□ -2.57
VPS13CQ709C8 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC-1.02□□□□□ -2.57
VPS13CQ709C8 RNU6-586P-201ENST00000517265 104 ntBASIC-1.02□□□□□ -2.57
VPS13CQ709C8 AP000763.2-201ENST00000540641 163 ntBASIC-1.02□□□□□ -2.57
VPS13CQ709C8 BCRP9-201ENST00000605312 388 ntBASIC-1.02□□□□□ -2.57
VPS13CQ709C8 RNU6-94P-201ENST00000607728 107 ntBASIC-1.02□□□□□ -2.57
VPS13CQ709C8 RNU6-505P-201ENST00000384427 107 ntBASIC-1.02□□□□□ -2.57
VPS13CQ709C8 MIR873-201ENST00000401120 77 ntBASIC-1.02□□□□□ -2.57
VPS13CQ709C8 AL603865.2-201ENST00000401679 213 ntBASIC-1.02□□□□□ -2.57
VPS13CQ709C8 SRRM1P2-201ENST00000464531 1192 ntBASIC-1.02□□□□□ -2.57
VPS13CQ709C8 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC-1.02□□□□□ -2.57
VPS13CQ709C8 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-1.02□□□□□ -2.57
VPS13CQ709C8 AF129408.1-201ENST00000608767 431 ntBASIC-1.02□□□□□ -2.57
VPS13CQ709C8 RNU6-1019P-201ENST00000364424 107 ntBASIC-1.03□□□□□ -2.57
VPS13CQ709C8 MTND2P4-201ENST00000445034 1004 ntBASIC-1.03□□□□□ -2.57
VPS13CQ709C8 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.03□□□□□ -2.57
VPS13CQ709C8 AC012213.3-201ENST00000577199 777 ntBASIC-1.03□□□□□ -2.57
VPS13CQ709C8 RBM11P1-201ENST00000604951 799 ntBASIC-1.03□□□□□ -2.57
VPS13CQ709C8 RNU6-47P-201ENST00000383866 107 ntBASIC-1.03□□□□□ -2.57
VPS13CQ709C8 RNU4-27P-201ENST00000410889 139 ntBASIC-1.03□□□□□ -2.57
VPS13CQ709C8 AC010615.3-201ENST00000597319 394 ntBASIC-1.03□□□□□ -2.57
VPS13CQ709C8 RNU6-91P-201ENST00000607774 107 ntBASIC-1.03□□□□□ -2.57
VPS13CQ709C8 FER-210ENST00000628534 558 ntTSL 5 BASIC-1.03□□□□□ -2.57
VPS13CQ709C8 SNORA26-201ENST00000391286 122 ntBASIC-1.04□□□□□ -2.58
VPS13CQ709C8 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC-1.04□□□□□ -2.58
VPS13CQ709C8 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-1.04□□□□□ -2.58
VPS13CQ709C8 STAG3L5P-204ENST00000443759 179 ntBASIC-1.04□□□□□ -2.58
VPS13CQ709C8 FCF1P4-201ENST00000448326 183 ntBASIC-1.04□□□□□ -2.58
VPS13CQ709C8 CR383656.4-201ENST00000546909 122 ntBASIC-1.04□□□□□ -2.58
VPS13CQ709C8 AL137246.1-201ENST00000607072 977 ntBASIC-1.04□□□□□ -2.58
VPS13CQ709C8 AC098679.4-201ENST00000624241 654 ntBASIC-1.04□□□□□ -2.58
VPS13CQ709C8 SNORA75.1-201ENST00000391130 148 ntBASIC-1.04□□□□□ -2.58
VPS13CQ709C8 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-1.04□□□□□ -2.58
VPS13CQ709C8 YWHAZP8-201ENST00000436935 731 ntBASIC-1.04□□□□□ -2.58
VPS13CQ709C8 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-1.04□□□□□ -2.58
VPS13CQ709C8 AC063944.3-201ENST00000609969 533 ntBASIC-1.04□□□□□ -2.58
VPS13CQ709C8 MTND4P9-201ENST00000507819 1346 ntBASIC-1.04□□□□□ -2.58
VPS13CQ709C8 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-1.04□□□□□ -2.58
VPS13CQ709C8 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-1.04□□□□□ -2.58
VPS13CQ709C8 RPS29P27-201ENST00000463711 170 ntBASIC-1.04□□□□□ -2.58
VPS13CQ709C8 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-1.04□□□□□ -2.58
VPS13CQ709C8 MIR4709-201ENST00000577272 72 ntBASIC-1.04□□□□□ -2.58
VPS13CQ709C8 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1.04□□□□□ -2.58
VPS13CQ709C8 RMST_7.1-201ENST00000621935 268 ntBASIC-1.04□□□□□ -2.58
VPS13CQ709C8 MIR335-201ENST00000362173 94 ntBASIC-1.05□□□□□ -2.58
VPS13CQ709C8 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.05□□□□□ -2.58
VPS13CQ709C8 SNORD111-201ENST00000408139 94 ntBASIC-1.05□□□□□ -2.58
VPS13CQ709C8 DEFB130D-201ENST00000426866 237 ntBASIC-1.05□□□□□ -2.58
VPS13CQ709C8 MTCO1P5-201ENST00000433573 344 ntBASIC-1.05□□□□□ -2.58
VPS13CQ709C8 RN7SKP256-201ENST00000517201 314 ntBASIC-1.05□□□□□ -2.58
VPS13CQ709C8 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC-1.05□□□□□ -2.58
VPS13CQ709C8 DEFB130C-202ENST00000530001 230 ntBASIC-1.05□□□□□ -2.58
VPS13CQ709C8 AC124947.2-202ENST00000552735 133 ntBASIC-1.05□□□□□ -2.58
VPS13CQ709C8 AC004223.2-201ENST00000590309 544 ntBASIC-1.05□□□□□ -2.58
VPS13CQ709C8 AL161729.4-201ENST00000604650 476 ntBASIC-1.05□□□□□ -2.58
VPS13CQ709C8 MIR6079-201ENST00000635807 62 ntBASIC-1.05□□□□□ -2.58
VPS13CQ709C8 AC069271.1-201ENST00000445577 156 ntBASIC-1.05□□□□□ -2.58
VPS13CQ709C8 MIR3976-201ENST00000606807 139 ntBASIC-1.05□□□□□ -2.58
VPS13CQ709C8 UBE2Q2P6-201ENST00000612666 153 ntBASIC-1.05□□□□□ -2.58
VPS13CQ709C8 MTND5P31-201ENST00000419366 1374 ntBASIC-1.06□□□□□ -2.58
VPS13CQ709C8 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.06□□□□□ -2.58
VPS13CQ709C8 AC007327.1-201ENST00000447461 264 ntBASIC-1.06□□□□□ -2.58
VPS13CQ709C8 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC-1.06□□□□□ -2.58
VPS13CQ709C8 RNU5A-7P-201ENST00000515979 116 ntBASIC-1.06□□□□□ -2.58
VPS13CQ709C8 AC015688.2-201ENST00000584523 262 ntBASIC-1.06□□□□□ -2.58
VPS13CQ709C8 RNU6-312P-201ENST00000364629 107 ntBASIC-1.06□□□□□ -2.58
VPS13CQ709C8 MT-TC-201ENST00000387405 66 ntBASIC-1.06□□□□□ -2.58
VPS13CQ709C8 RPL39P39-201ENST00000455840 151 ntBASIC-1.06□□□□□ -2.58
VPS13CQ709C8 AL163973.1-201ENST00000484753 577 ntBASIC-1.06□□□□□ -2.58
VPS13CQ709C8 AL160314.1-201ENST00000490836 438 ntBASIC-1.06□□□□□ -2.58
VPS13CQ709C8 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC-1.06□□□□□ -2.58
VPS13CQ709C8 AC093726.3-201ENST00000637588 150 ntBASIC-1.06□□□□□ -2.58
VPS13CQ709C8 FCF1P9-201ENST00000412546 282 ntBASIC-1.06□□□□□ -2.58
VPS13CQ709C8 AC016597.2-201ENST00000613256 341 ntBASIC-1.06□□□□□ -2.58
VPS13CQ709C8 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-1.06□□□□□ -2.58
VPS13CQ709C8 RNU6-944P-201ENST00000364023 107 ntBASIC-1.07□□□□□ -2.58
VPS13CQ709C8 AL592447.1-201ENST00000447592 540 ntBASIC-1.07□□□□□ -2.58
VPS13CQ709C8 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC-1.07□□□□□ -2.58
VPS13CQ709C8 AC106754.1-201ENST00000562632 1513 ntBASIC-1.07□□□□□ -2.58
VPS13CQ709C8 MTCYBP32-201ENST00000427945 1084 ntBASIC-1.07□□□□□ -2.58
VPS13CQ709C8 SNORA13-201ENST00000458790 133 ntBASIC-1.07□□□□□ -2.58
VPS13CQ709C8 Y_RNA.330-201ENST00000365230 109 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms