Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 Y_RNA.80-201ENST00000362996 102 ntBASIC2.7□□□□□ -1.98
RNF220Q5VTB9 SNORA38.1-201ENST00000364172 131 ntBASIC2.7□□□□□ -1.98
RNF220Q5VTB9 RNU6-438P-201ENST00000365561 103 ntBASIC2.7□□□□□ -1.98
RNF220Q5VTB9 Y_RNA.485-201ENST00000384395 102 ntBASIC2.7□□□□□ -1.98
RNF220Q5VTB9 MIR329-1-201ENST00000385028 80 ntBASIC2.7□□□□□ -1.98
RNF220Q5VTB9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RNF220Q5VTB9 MIR300-201ENST00000401138 83 ntBASIC2.7□□□□□ -1.98
RNF220Q5VTB9 RNA5SP181-201ENST00000410246 98 ntBASIC2.7□□□□□ -1.98
RNF220Q5VTB9 AC004866.1-201ENST00000411748 78 ntBASIC2.7□□□□□ -1.98
RNF220Q5VTB9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.7□□□□□ -1.98
RNF220Q5VTB9 AC010095.1-201ENST00000443543 144 ntBASIC2.7□□□□□ -1.98
RNF220Q5VTB9 ATP5EP1-201ENST00000510257 156 ntBASIC2.7□□□□□ -1.98
RNF220Q5VTB9 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.7□□□□□ -1.98
RNF220Q5VTB9 Y_RNA.683-201ENST00000516508 93 ntBASIC2.7□□□□□ -1.98
RNF220Q5VTB9 RN7SKP49-201ENST00000516675 260 ntBASIC2.7□□□□□ -1.98
RNF220Q5VTB9 RNA5SP490-201ENST00000517141 136 ntBASIC2.7□□□□□ -1.98
RNF220Q5VTB9 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.7□□□□□ -1.98
RNF220Q5VTB9 AC016925.2-201ENST00000605108 242 ntBASIC2.7□□□□□ -1.98
RNF220Q5VTB9 SNORD11B-201ENST00000607707 90 ntBASIC2.7□□□□□ -1.98
RNF220Q5VTB9 AC096644.4-201ENST00000563417 2912 ntBASIC2.7□□□□□ -1.98
RNF220Q5VTB9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.7□□□□□ -1.98
RNF220Q5VTB9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
RNF220Q5VTB9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
RNF220Q5VTB9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.69□□□□□ -1.98
RNF220Q5VTB9 MTND5P35-201ENST00000557537 1720 ntBASIC2.69□□□□□ -1.98
RNF220Q5VTB9 SNORD31B-201ENST00000364977 69 ntBASIC2.69□□□□□ -1.98
RNF220Q5VTB9 RNU6-1145P-201ENST00000384246 107 ntBASIC2.69□□□□□ -1.98
RNF220Q5VTB9 RNY3P4-201ENST00000384428 101 ntBASIC2.69□□□□□ -1.98
RNF220Q5VTB9 RNA5SP171-201ENST00000391071 115 ntBASIC2.69□□□□□ -1.98
RNF220Q5VTB9 MRPL42P3-201ENST00000401492 326 ntBASIC2.69□□□□□ -1.98
RNF220Q5VTB9 AL033519.2-201ENST00000403958 392 ntBASIC2.69□□□□□ -1.98
RNF220Q5VTB9 Y_RNA.595-201ENST00000410403 105 ntBASIC2.69□□□□□ -1.98
RNF220Q5VTB9 RNU6-1001P-201ENST00000411265 100 ntBASIC2.69□□□□□ -1.98
RNF220Q5VTB9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.69□□□□□ -1.98
RNF220Q5VTB9 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.69□□□□□ -1.98
RNF220Q5VTB9 RPS3AP12-201ENST00000443616 753 ntBASIC2.69□□□□□ -1.98
RNF220Q5VTB9 AC007395.1-201ENST00000451333 677 ntBASIC2.69□□□□□ -1.98
RNF220Q5VTB9 AC091179.3-201ENST00000474761 144 ntBASIC2.69□□□□□ -1.98
RNF220Q5VTB9 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.69□□□□□ -1.98
RNF220Q5VTB9 SNORA4.4-201ENST00000515921 135 ntBASIC2.69□□□□□ -1.98
RNF220Q5VTB9 AP003072.1-201ENST00000531740 145 ntBASIC2.69□□□□□ -1.98
RNF220Q5VTB9 RRN3P3-201ENST00000549207 578 ntBASIC2.69□□□□□ -1.98
RNF220Q5VTB9 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.69□□□□□ -1.98
RNF220Q5VTB9 MIR3944-201ENST00000581277 108 ntBASIC2.69□□□□□ -1.98
RNF220Q5VTB9 MZT1P2-201ENST00000604387 248 ntBASIC2.69□□□□□ -1.98
RNF220Q5VTB9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
RNF220Q5VTB9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RNF220Q5VTB9 AC091812.1-201ENST00000432235 1948 ntBASIC2.68□□□□□ -1.98
RNF220Q5VTB9 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RNF220Q5VTB9 MIR6073-201ENST00000352083 89 ntBASIC2.68□□□□□ -1.98
RNF220Q5VTB9 Y_RNA.27-201ENST00000362540 103 ntBASIC2.68□□□□□ -1.98
RNF220Q5VTB9 RNA5SP361-201ENST00000362686 118 ntBASIC2.68□□□□□ -1.98
RNF220Q5VTB9 RNU6-318P-201ENST00000384283 103 ntBASIC2.68□□□□□ -1.98
RNF220Q5VTB9 Y_RNA.526-201ENST00000384572 110 ntBASIC2.68□□□□□ -1.98
RNF220Q5VTB9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.68□□□□□ -1.98
RNF220Q5VTB9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.68□□□□□ -1.98
RNF220Q5VTB9 CR769767.1-201ENST00000436337 346 ntBASIC2.68□□□□□ -1.98
RNF220Q5VTB9 PRELID3BP1-201ENST00000457142 540 ntBASIC2.68□□□□□ -1.98
RNF220Q5VTB9 RPL7P49-201ENST00000471402 708 ntBASIC2.68□□□□□ -1.98
RNF220Q5VTB9 AC093852.1-201ENST00000503587 266 ntBASIC2.68□□□□□ -1.98
RNF220Q5VTB9 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.68□□□□□ -1.98
RNF220Q5VTB9 AC093259.1-201ENST00000509755 300 ntBASIC2.68□□□□□ -1.98
RNF220Q5VTB9 RNU6-991P-201ENST00000516168 107 ntBASIC2.68□□□□□ -1.98
RNF220Q5VTB9 RPS29P30-201ENST00000600975 111 ntBASIC2.68□□□□□ -1.98
RNF220Q5VTB9 RPL12P50-201ENST00000603116 116 ntBASIC2.68□□□□□ -1.98
RNF220Q5VTB9 Y_RNA.812-201ENST00000610788 101 ntBASIC2.68□□□□□ -1.98
RNF220Q5VTB9 AL137847.3-201ENST00000611521 109 ntBASIC2.68□□□□□ -1.98
RNF220Q5VTB9 Y_RNA.784-201ENST00000613803 101 ntBASIC2.68□□□□□ -1.98
RNF220Q5VTB9 Y_RNA.787-201ENST00000616522 101 ntBASIC2.68□□□□□ -1.98
RNF220Q5VTB9 Y_RNA.780-201ENST00000617336 101 ntBASIC2.68□□□□□ -1.98
RNF220Q5VTB9 Y_RNA.801-201ENST00000619005 101 ntBASIC2.68□□□□□ -1.98
RNF220Q5VTB9 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.68□□□□□ -1.98
RNF220Q5VTB9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RNF220Q5VTB9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
RNF220Q5VTB9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
RNF220Q5VTB9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.67□□□□□ -1.98
RNF220Q5VTB9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
RNF220Q5VTB9 RNU6-545P-201ENST00000362681 104 ntBASIC2.67□□□□□ -1.98
RNF220Q5VTB9 RNU1-91P-201ENST00000364746 163 ntBASIC2.67□□□□□ -1.98
RNF220Q5VTB9 SNORA33.2-201ENST00000365413 134 ntBASIC2.67□□□□□ -1.98
RNF220Q5VTB9 Y_RNA.424-201ENST00000384063 103 ntBASIC2.67□□□□□ -1.98
RNF220Q5VTB9 RNU1-148P-201ENST00000384472 162 ntBASIC2.67□□□□□ -1.98
RNF220Q5VTB9 RNU6-851P-201ENST00000384565 107 ntBASIC2.67□□□□□ -1.98
RNF220Q5VTB9 AL590004.1-201ENST00000405321 300 ntBASIC2.67□□□□□ -1.98
RNF220Q5VTB9 SRIP3-201ENST00000413200 219 ntBASIC2.67□□□□□ -1.98
RNF220Q5VTB9 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.67□□□□□ -1.98
RNF220Q5VTB9 IFNA11P-201ENST00000446352 526 ntBASIC2.67□□□□□ -1.98
RNF220Q5VTB9 AC112492.4-201ENST00000456549 352 ntBASIC2.67□□□□□ -1.98
RNF220Q5VTB9 RNU1-117P-201ENST00000517041 158 ntBASIC2.67□□□□□ -1.98
RNF220Q5VTB9 RNA5SP402-201ENST00000517148 110 ntBASIC2.67□□□□□ -1.98
RNF220Q5VTB9 AP002404.1-201ENST00000532005 451 ntBASIC2.67□□□□□ -1.98
RNF220Q5VTB9 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.67□□□□□ -1.98
RNF220Q5VTB9 MIR3126-201ENST00000577443 74 ntBASIC2.67□□□□□ -1.98
RNF220Q5VTB9 MIR4446-201ENST00000578505 67 ntBASIC2.67□□□□□ -1.98
RNF220Q5VTB9 AL049779.4-201ENST00000604500 156 ntBASIC2.67□□□□□ -1.98
RNF220Q5VTB9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.67□□□□□ -1.98
RNF220Q5VTB9 AC091953.5-201ENST00000622919 233 ntBASIC2.67□□□□□ -1.98
RNF220Q5VTB9 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.67□□□□□ -1.98
RNF220Q5VTB9 AC068205.3-201ENST00000636385 468 ntBASIC2.67□□□□□ -1.98
RNF220Q5VTB9 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms