Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 USP8P1-201ENST00000494673 3183 ntBASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 RNA5SP307-201ENST00000362863 116 ntBASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 RNU4-36P-201ENST00000364294 144 ntBASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 RNA5SP283-201ENST00000365604 119 ntBASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 RNU6-1181P-201ENST00000384191 106 ntBASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 MIR134-201ENST00000385258 73 ntBASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 RN7SKP27-201ENST00000410684 333 ntBASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 SNORA74C-2-201ENST00000411179 201 ntBASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 AC009237.10-201ENST00000414112 510 ntBASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 AC108751.2-201ENST00000469993 231 ntBASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 RNU6-830P-201ENST00000516353 107 ntBASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 RNU2-58P-201ENST00000516403 183 ntBASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 RNU6-1149P-201ENST00000516810 97 ntBASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 MIR4666B-201ENST00000578142 81 ntBASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 AL929325.1-201ENST00000603096 117 ntBASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 FAM27D1-201ENST00000612308 341 ntBASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.88□□□□□ -1.79
RNFT1Q5M7Z0 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
RNFT1Q5M7Z0 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.87□□□□□ -1.79
RNFT1Q5M7Z0 RNU4-13P-201ENST00000364019 141 ntBASIC3.87□□□□□ -1.79
RNFT1Q5M7Z0 Y_RNA.265-201ENST00000364677 108 ntBASIC3.87□□□□□ -1.79
RNFT1Q5M7Z0 SNORA1-201ENST00000384107 130 ntBASIC3.87□□□□□ -1.79
RNFT1Q5M7Z0 RNU6-675P-201ENST00000384236 104 ntBASIC3.87□□□□□ -1.79
RNFT1Q5M7Z0 MIR195-201ENST00000385194 87 ntBASIC3.87□□□□□ -1.79
RNFT1Q5M7Z0 RN7SKP167-201ENST00000411047 285 ntBASIC3.87□□□□□ -1.79
RNFT1Q5M7Z0 AC245102.2-201ENST00000448956 180 ntBASIC3.87□□□□□ -1.79
RNFT1Q5M7Z0 RPS26P48-201ENST00000491713 339 ntBASIC3.87□□□□□ -1.79
RNFT1Q5M7Z0 AC145146.1-201ENST00000496370 254 ntBASIC3.87□□□□□ -1.79
RNFT1Q5M7Z0 AL592156.1-201ENST00000508758 304 ntBASIC3.87□□□□□ -1.79
RNFT1Q5M7Z0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.87□□□□□ -1.79
RNFT1Q5M7Z0 AC099522.1-202ENST00000514718 367 ntBASIC3.87□□□□□ -1.79
RNFT1Q5M7Z0 RNA5SP73-201ENST00000516744 108 ntBASIC3.87□□□□□ -1.79
RNFT1Q5M7Z0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.87□□□□□ -1.79
RNFT1Q5M7Z0 DEFB131E-201ENST00000532329 154 ntBASIC3.87□□□□□ -1.79
RNFT1Q5M7Z0 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.87□□□□□ -1.79
RNFT1Q5M7Z0 AC112200.1-201ENST00000625015 234 ntBASIC3.87□□□□□ -1.79
RNFT1Q5M7Z0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RNFT1Q5M7Z0 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.87□□□□□ -1.79
RNFT1Q5M7Z0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RNFT1Q5M7Z0 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RNFT1Q5M7Z0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RNFT1Q5M7Z0 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RNFT1Q5M7Z0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RNFT1Q5M7Z0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RNFT1Q5M7Z0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
RNFT1Q5M7Z0 Y_RNA.73-201ENST00000362910 113 ntBASIC3.86□□□□□ -1.79
RNFT1Q5M7Z0 Y_RNA.796-201ENST00000364268 102 ntBASIC3.86□□□□□ -1.79
RNFT1Q5M7Z0 RNA5SP130-201ENST00000364431 114 ntBASIC3.86□□□□□ -1.79
RNFT1Q5M7Z0 Y_RNA.799-201ENST00000364992 102 ntBASIC3.86□□□□□ -1.79
RNFT1Q5M7Z0 RNU6-1240P-201ENST00000365155 104 ntBASIC3.86□□□□□ -1.79
RNFT1Q5M7Z0 Y_RNA.344-201ENST00000365381 112 ntBASIC3.86□□□□□ -1.79
RNFT1Q5M7Z0 PPIAP31-201ENST00000405422 495 ntBASIC3.86□□□□□ -1.79
RNFT1Q5M7Z0 AL031121.1-201ENST00000406553 254 ntBASIC3.86□□□□□ -1.79
RNFT1Q5M7Z0 TOMM22P1-201ENST00000418578 312 ntBASIC3.86□□□□□ -1.79
RNFT1Q5M7Z0 AC245291.1-201ENST00000419501 328 ntBASIC3.86□□□□□ -1.79
RNFT1Q5M7Z0 AL117339.2-201ENST00000430475 180 ntBASIC3.86□□□□□ -1.79
RNFT1Q5M7Z0 RNA5SP20-201ENST00000515976 84 ntBASIC3.86□□□□□ -1.79
RNFT1Q5M7Z0 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.86□□□□□ -1.79
RNFT1Q5M7Z0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.86□□□□□ -1.79
RNFT1Q5M7Z0 RPL23AP97-201ENST00000568955 471 ntBASIC3.86□□□□□ -1.79
RNFT1Q5M7Z0 AC007229.1-201ENST00000590455 412 ntBASIC3.86□□□□□ -1.79
RNFT1Q5M7Z0 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.86□□□□□ -1.79
RNFT1Q5M7Z0 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
RNFT1Q5M7Z0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 AC068254.2-201ENST00000623938 3577 ntBASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 Y_RNA.40-201ENST00000362645 93 ntBASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 RNU6-1010P-201ENST00000362757 107 ntBASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 RNU1-20P-201ENST00000363314 162 ntBASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 RNU6-529P-201ENST00000363383 104 ntBASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 RNU6-979P-201ENST00000383896 107 ntBASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 RPL21P3-201ENST00000395517 478 ntBASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 AL139095.1-201ENST00000404326 391 ntBASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 RNA5SP511-201ENST00000410487 115 ntBASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 RNU2-37P-201ENST00000410695 177 ntBASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 AC063976.3-201ENST00000426849 329 ntBASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 NDUFB4P6-201ENST00000436819 366 ntBASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 RPS3P1-201ENST00000456781 192 ntBASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 RPL23AP67-201ENST00000465341 474 ntBASIC3.85□□□□□ -1.79
RNFT1Q5M7Z0 HMGN2P9-201ENST00000476875 229 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms