Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 Y_RNA.668-201ENST00000516233 93 ntBASIC3.2□□□□□ -1.9
CCDC178Q5BJE1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.2□□□□□ -1.9
CCDC178Q5BJE1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC178Q5BJE1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC178Q5BJE1 AL034555.1-201ENST00000604816 211 ntBASIC3.2□□□□□ -1.9
CCDC178Q5BJE1 U6.104-201ENST00000637979 90 ntBASIC3.2□□□□□ -1.9
CCDC178Q5BJE1 ZNF204P-201ENST00000416749 2397 ntBASIC3.2□□□□□ -1.9
CCDC178Q5BJE1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC178Q5BJE1 AP003122.5-201ENST00000527668 3766 ntBASIC3.2□□□□□ -1.9
CCDC178Q5BJE1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 AL161431.1-201ENST00000618966 4205 ntBASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 SNORA5B-201ENST00000363786 132 ntBASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 RNU6-873P-201ENST00000363833 107 ntBASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 RNU1-112P-201ENST00000364401 164 ntBASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 CD24P4-201ENST00000382840 243 ntBASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 RNU6-159P-201ENST00000391080 106 ntBASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 Y_RNA.602-201ENST00000410535 92 ntBASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 RNU2-38P-201ENST00000410856 79 ntBASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 HMGN2P35-201ENST00000412164 270 ntBASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 AC096638.1-201ENST00000444678 216 ntBASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 HMGB1P35-201ENST00000503360 598 ntBASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 RAC1P5-201ENST00000512182 576 ntBASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 MRPS36P2-201ENST00000512569 299 ntBASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 RNA5SP356-201ENST00000515972 94 ntBASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 RN7SKP132-201ENST00000516001 208 ntBASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 RNU6-1012P-201ENST00000516606 109 ntBASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 RNU6-567P-201ENST00000516746 107 ntBASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 AC079600.2-201ENST00000550076 130 ntBASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 RNU6-91P-201ENST00000607774 107 ntBASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 UCA1.1-201ENST00000620952 75 ntBASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 MIR6733-201ENST00000635723 61 ntBASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC178Q5BJE1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 AC010615.1-201ENST00000594254 1764 ntBASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 RNU6-1010P-201ENST00000362757 107 ntBASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 RNU6-1318P-201ENST00000365389 103 ntBASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 RNU1-109P-201ENST00000383960 147 ntBASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 RNU6-937P-201ENST00000384325 106 ntBASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 Y_RNA.477-201ENST00000384352 108 ntBASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 MIR215-201ENST00000384858 110 ntBASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 SNORA26.3-201ENST00000391119 136 ntBASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 RNA5SP184-201ENST00000411071 108 ntBASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 AL358075.3-201ENST00000426289 226 ntBASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 RPL23AP58-201ENST00000440453 469 ntBASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 TRBVB-201ENST00000477100 408 ntBASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 RNU6-1198P-201ENST00000516904 67 ntBASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 Y_RNA.713-201ENST00000517013 96 ntBASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 CYP4A27P-201ENST00000567218 190 ntBASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 AC136932.1-201ENST00000574771 208 ntBASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 MIR3923-201ENST00000579521 83 ntBASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 MIR3136-201ENST00000583498 78 ntBASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 AC002064.3-201ENST00000623448 346 ntBASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 SCARNA15.3-201ENST00000626315 122 ntBASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 SCARNA4.1-201ENST00000628597 123 ntBASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 AC110079.1-202ENST00000635213 138 ntBASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC178Q5BJE1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CCDC178Q5BJE1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC178Q5BJE1 snoU2_19.1-201ENST00000362361 80 ntBASIC3.17□□□□□ -1.9
CCDC178Q5BJE1 RNU6-859P-201ENST00000362728 107 ntBASIC3.17□□□□□ -1.9
CCDC178Q5BJE1 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC178Q5BJE1 RNU6-281P-201ENST00000384212 103 ntBASIC3.17□□□□□ -1.9
CCDC178Q5BJE1 MIR186-201ENST00000384988 86 ntBASIC3.17□□□□□ -1.9
CCDC178Q5BJE1 CBX3P9-201ENST00000402326 552 ntBASIC3.17□□□□□ -1.9
CCDC178Q5BJE1 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC178Q5BJE1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC178Q5BJE1 AC112220.1-201ENST00000434628 355 ntBASIC3.17□□□□□ -1.9
CCDC178Q5BJE1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC178Q5BJE1 RNU6-1132P-201ENST00000459214 107 ntBASIC3.17□□□□□ -1.9
CCDC178Q5BJE1 AC096725.1-201ENST00000514266 313 ntBASIC3.17□□□□□ -1.9
CCDC178Q5BJE1 SNORA31.6-201ENST00000516241 130 ntBASIC3.17□□□□□ -1.9
CCDC178Q5BJE1 RNA5SP76-201ENST00000516277 87 ntBASIC3.17□□□□□ -1.9
CCDC178Q5BJE1 SNORA25.14-201ENST00000516481 132 ntBASIC3.17□□□□□ -1.9
CCDC178Q5BJE1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC178Q5BJE1 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.17□□□□□ -1.9
CCDC178Q5BJE1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC178Q5BJE1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.17□□□□□ -1.9
CCDC178Q5BJE1 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CCDC178Q5BJE1 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.17□□□□□ -1.9
CCDC178Q5BJE1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC178Q5BJE1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.16□□□□□ -1.9
CCDC178Q5BJE1 RNU6-655P-201ENST00000362858 107 ntBASIC3.16□□□□□ -1.9
CCDC178Q5BJE1 SNORD56.5-201ENST00000364281 72 ntBASIC3.16□□□□□ -1.9
CCDC178Q5BJE1 RNU6-378P-201ENST00000384324 107 ntBASIC3.16□□□□□ -1.9
CCDC178Q5BJE1 MIR181B1-201ENST00000385240 110 ntBASIC3.16□□□□□ -1.9
CCDC178Q5BJE1 SNORD88.1-201ENST00000408684 91 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms