Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 AC007546.2-201ENST00000623996 360 ntBASIC6.57□□□□□ -1.36
NCBP3Q53F19 MIR548BB-201ENST00000626714 66 ntBASIC6.57□□□□□ -1.36
NCBP3Q53F19 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC6.57□□□□□ -1.36
NCBP3Q53F19 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NCBP3Q53F19 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NCBP3Q53F19 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NCBP3Q53F19 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
NCBP3Q53F19 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NCBP3Q53F19 RNA5SP144-201ENST00000410846 116 ntBASIC6.56□□□□□ -1.36
NCBP3Q53F19 RPL23AP27-201ENST00000415161 451 ntBASIC6.56□□□□□ -1.36
NCBP3Q53F19 RNA5SP112-201ENST00000515937 99 ntBASIC6.56□□□□□ -1.36
NCBP3Q53F19 AL358944.1-201ENST00000528537 144 ntBASIC6.56□□□□□ -1.36
NCBP3Q53F19 AC078899.2-201ENST00000595282 212 ntBASIC6.56□□□□□ -1.36
NCBP3Q53F19 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NCBP3Q53F19 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC6.56□□□□□ -1.36
NCBP3Q53F19 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
NCBP3Q53F19 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NCBP3Q53F19 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
NCBP3Q53F19 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.55□□□□□ -1.36
NCBP3Q53F19 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NCBP3Q53F19 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
NCBP3Q53F19 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NCBP3Q53F19 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
NCBP3Q53F19 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NCBP3Q53F19 RNA5SP507-201ENST00000363603 121 ntBASIC6.55□□□□□ -1.36
NCBP3Q53F19 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.55□□□□□ -1.36
NCBP3Q53F19 AL022718.1-201ENST00000412004 84 ntBASIC6.55□□□□□ -1.36
NCBP3Q53F19 AC073850.1-201ENST00000449243 255 ntBASIC6.55□□□□□ -1.36
NCBP3Q53F19 AL691482.1-201ENST00000453255 87 ntBASIC6.55□□□□□ -1.36
NCBP3Q53F19 AL049830.1-201ENST00000468034 425 ntBASIC6.55□□□□□ -1.36
NCBP3Q53F19 RN7SL808P-201ENST00000496066 299 ntBASIC6.55□□□□□ -1.36
NCBP3Q53F19 RNU7-128P-201ENST00000517247 62 ntBASIC6.55□□□□□ -1.36
NCBP3Q53F19 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
NCBP3Q53F19 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.55□□□□□ -1.36
NCBP3Q53F19 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC6.55□□□□□ -1.36
NCBP3Q53F19 Z95331.1-201ENST00000623075 23112 ntBASIC6.55□□□□□ -1.36
NCBP3Q53F19 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
NCBP3Q53F19 AP003122.5-201ENST00000527668 3766 ntBASIC6.55□□□□□ -1.36
NCBP3Q53F19 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC6.55□□□□□ -1.36
NCBP3Q53F19 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
NCBP3Q53F19 RNU6-1084P-201ENST00000362498 107 ntBASIC6.54□□□□□ -1.36
NCBP3Q53F19 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
NCBP3Q53F19 AC060773.1-201ENST00000421698 310 ntBASIC6.54□□□□□ -1.36
NCBP3Q53F19 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC6.54□□□□□ -1.36
NCBP3Q53F19 RN7SL812P-201ENST00000493791 279 ntBASIC6.54□□□□□ -1.36
NCBP3Q53F19 SNORA70.14-201ENST00000516205 110 ntBASIC6.54□□□□□ -1.36
NCBP3Q53F19 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NCBP3Q53F19 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NCBP3Q53F19 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
NCBP3Q53F19 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC6.53□□□□□ -1.36
NCBP3Q53F19 AC011266.1-201ENST00000624119 3569 ntBASIC6.53□□□□□ -1.36
NCBP3Q53F19 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC6.53□□□□□ -1.36
NCBP3Q53F19 RNA5SP388-201ENST00000362584 119 ntBASIC6.53□□□□□ -1.36
NCBP3Q53F19 SNORD68-201ENST00000363214 84 ntBASIC6.53□□□□□ -1.36
NCBP3Q53F19 Y_RNA.607-201ENST00000410597 98 ntBASIC6.53□□□□□ -1.36
NCBP3Q53F19 RNA5SP392-201ENST00000516905 112 ntBASIC6.53□□□□□ -1.36
NCBP3Q53F19 RNU6-856P-201ENST00000516959 98 ntBASIC6.53□□□□□ -1.36
NCBP3Q53F19 HMGN2P6-201ENST00000551091 273 ntBASIC6.53□□□□□ -1.36
NCBP3Q53F19 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NCBP3Q53F19 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC6.53□□□□□ -1.36
NCBP3Q53F19 AC068870.2-201ENST00000620635 389 ntBASIC6.53□□□□□ -1.36
NCBP3Q53F19 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NCBP3Q53F19 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.53□□□□□ -1.36
NCBP3Q53F19 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
NCBP3Q53F19 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
NCBP3Q53F19 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NCBP3Q53F19 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
NCBP3Q53F19 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC6.53□□□□□ -1.36
NCBP3Q53F19 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.36
NCBP3Q53F19 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
NCBP3Q53F19 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
NCBP3Q53F19 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NCBP3Q53F19 Y_RNA.377-201ENST00000365644 108 ntBASIC6.52□□□□□ -1.37
NCBP3Q53F19 RN7SKP213-201ENST00000410746 298 ntBASIC6.52□□□□□ -1.37
NCBP3Q53F19 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC6.52□□□□□ -1.37
NCBP3Q53F19 RPS23P1-201ENST00000491662 432 ntBASIC6.52□□□□□ -1.37
NCBP3Q53F19 ZFRP1-201ENST00000457579 2970 ntBASIC6.52□□□□□ -1.37
NCBP3Q53F19 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
NCBP3Q53F19 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NCBP3Q53F19 SNORD116-10-201ENST00000363791 102 ntBASIC6.51□□□□□ -1.37
NCBP3Q53F19 RNU2-40P-201ENST00000410833 196 ntBASIC6.51□□□□□ -1.37
NCBP3Q53F19 RNA5SP104-201ENST00000410989 118 ntBASIC6.51□□□□□ -1.37
NCBP3Q53F19 SCARNA10-201ENST00000459255 330 ntBASIC6.51□□□□□ -1.37
NCBP3Q53F19 MIR7155-201ENST00000615925 56 ntBASIC6.51□□□□□ -1.37
NCBP3Q53F19 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
NCBP3Q53F19 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NCBP3Q53F19 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NCBP3Q53F19 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
NCBP3Q53F19 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NCBP3Q53F19 MAPK10-263ENST00000641052 4307 ntBASIC6.51□□□□□ -1.37
NCBP3Q53F19 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NCBP3Q53F19 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NCBP3Q53F19 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC6.5□□□□□ -1.37
NCBP3Q53F19 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
NCBP3Q53F19 MAPK10-328ENST00000641553 4009 ntBASIC6.5□□□□□ -1.37
NCBP3Q53F19 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NCBP3Q53F19 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NCBP3Q53F19 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NCBP3Q53F19 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
NCBP3Q53F19 RNU6-1201P-201ENST00000384227 107 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms