Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC019176.2-201ENST00000611579 315 ntBASIC4.43□□□□□ -1.7
CTC1Q2NKJ3 AC018692.3-201ENST00000623929 123 ntBASIC4.43□□□□□ -1.7
CTC1Q2NKJ3 SNORD98-201ENST00000636377 67 ntBASIC4.43□□□□□ -1.7
CTC1Q2NKJ3 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTC1Q2NKJ3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CTC1Q2NKJ3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CTC1Q2NKJ3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.43□□□□□ -1.7
CTC1Q2NKJ3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTC1Q2NKJ3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTC1Q2NKJ3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTC1Q2NKJ3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTC1Q2NKJ3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTC1Q2NKJ3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.42□□□□□ -1.7
CTC1Q2NKJ3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTC1Q2NKJ3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTC1Q2NKJ3 AL133412.1-201ENST00000380194 2992 ntBASIC4.42□□□□□ -1.7
CTC1Q2NKJ3 Y_RNA.93-201ENST00000363066 109 ntBASIC4.42□□□□□ -1.7
CTC1Q2NKJ3 Y_RNA.111-201ENST00000363248 100 ntBASIC4.42□□□□□ -1.7
CTC1Q2NKJ3 Y_RNA.366-201ENST00000365540 102 ntBASIC4.42□□□□□ -1.7
CTC1Q2NKJ3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CTC1Q2NKJ3 MIR493-201ENST00000385254 89 ntBASIC4.42□□□□□ -1.7
CTC1Q2NKJ3 MIR325-201ENST00000385260 98 ntBASIC4.42□□□□□ -1.7
CTC1Q2NKJ3 CBX3P9-201ENST00000402326 552 ntBASIC4.42□□□□□ -1.7
CTC1Q2NKJ3 AL353689.1-201ENST00000438895 199 ntBASIC4.42□□□□□ -1.7
CTC1Q2NKJ3 AP000873.1-201ENST00000463987 400 ntBASIC4.42□□□□□ -1.7
CTC1Q2NKJ3 RPS26P15-201ENST00000488067 348 ntBASIC4.42□□□□□ -1.7
CTC1Q2NKJ3 RNU6-504P-201ENST00000516568 104 ntBASIC4.42□□□□□ -1.7
CTC1Q2NKJ3 AC026403.1-201ENST00000518938 295 ntBASIC4.42□□□□□ -1.7
CTC1Q2NKJ3 IGKV3-31-201ENST00000523109 329 ntBASIC4.42□□□□□ -1.7
CTC1Q2NKJ3 AL137067.1-201ENST00000615933 120 ntBASIC4.42□□□□□ -1.7
CTC1Q2NKJ3 MIR4727-201ENST00000622232 55 ntBASIC4.42□□□□□ -1.7
CTC1Q2NKJ3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CTC1Q2NKJ3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CTC1Q2NKJ3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 ADAM3A-203ENST00000461344 2157 ntBASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 RNA5SP307-201ENST00000362863 116 ntBASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 Y_RNA.78-201ENST00000362970 110 ntBASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 SNORA63D-201ENST00000364359 132 ntBASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 Y_RNA.313-201ENST00000365095 103 ntBASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 MIR624-201ENST00000385217 97 ntBASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 AC007064.1-201ENST00000412238 351 ntBASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 AL139281.1-201ENST00000422120 335 ntBASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 HMGN2P30-201ENST00000423237 256 ntBASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 AC027124.2-201ENST00000428249 105 ntBASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 SNORA74D-201ENST00000516404 141 ntBASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 RNU6-1337P-201ENST00000516525 95 ntBASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 CKS1BP7-201ENST00000522230 235 ntBASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 MIR3200-201ENST00000580767 85 ntBASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 FTX_3.1-201ENST00000610451 147 ntBASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 AC096577.2-201ENST00000611455 153 ntBASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 AC012314.7-201ENST00000619693 93 ntBASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 MAPK10-372ENST00000641954 3413 ntBASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CTC1Q2NKJ3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.4□□□□□ -1.7
CTC1Q2NKJ3 USP8P1-201ENST00000494673 3183 ntBASIC4.4□□□□□ -1.7
CTC1Q2NKJ3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.4□□□□□ -1.7
CTC1Q2NKJ3 SNORA31-201ENST00000362607 130 ntBASIC4.4□□□□□ -1.71
CTC1Q2NKJ3 EI24P2-201ENST00000397776 1076 ntBASIC4.4□□□□□ -1.71
CTC1Q2NKJ3 AL365496.1-201ENST00000426885 215 ntBASIC4.4□□□□□ -1.71
CTC1Q2NKJ3 NDUFB4P6-201ENST00000436819 366 ntBASIC4.4□□□□□ -1.71
CTC1Q2NKJ3 AL356535.1-201ENST00000440335 398 ntBASIC4.4□□□□□ -1.71
CTC1Q2NKJ3 Z75741.1-201ENST00000446793 314 ntBASIC4.4□□□□□ -1.71
CTC1Q2NKJ3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.4□□□□□ -1.71
CTC1Q2NKJ3 RNA5SP236-201ENST00000516169 116 ntBASIC4.4□□□□□ -1.71
CTC1Q2NKJ3 RNU6-344P-201ENST00000516635 111 ntBASIC4.4□□□□□ -1.71
CTC1Q2NKJ3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.4□□□□□ -1.71
CTC1Q2NKJ3 AC105245.1-201ENST00000581934 244 ntBASIC4.4□□□□□ -1.71
CTC1Q2NKJ3 AC007229.1-201ENST00000590455 412 ntBASIC4.4□□□□□ -1.71
CTC1Q2NKJ3 MIR432-201ENST00000606207 94 ntBASIC4.4□□□□□ -1.71
CTC1Q2NKJ3 AC009093.8-201ENST00000641769 292 ntBASIC4.4□□□□□ -1.71
CTC1Q2NKJ3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.4□□□□□ -1.71
CTC1Q2NKJ3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.4□□□□□ -1.71
CTC1Q2NKJ3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.4□□□□□ -1.71
CTC1Q2NKJ3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
CTC1Q2NKJ3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
CTC1Q2NKJ3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
CTC1Q2NKJ3 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.4□□□□□ -1.71
CTC1Q2NKJ3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.39□□□□□ -1.71
CTC1Q2NKJ3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.39□□□□□ -1.71
CTC1Q2NKJ3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.39□□□□□ -1.71
CTC1Q2NKJ3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CTC1Q2NKJ3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CTC1Q2NKJ3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTC1Q2NKJ3 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.39□□□□□ -1.71
CTC1Q2NKJ3 Y_RNA.290-201ENST00000364879 114 ntBASIC4.39□□□□□ -1.71
CTC1Q2NKJ3 RNU6-217P-201ENST00000384164 104 ntBASIC4.39□□□□□ -1.71
CTC1Q2NKJ3 MIR491-201ENST00000384877 84 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms