Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATP2B3Q16720 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATP2B3Q16720 Y_RNA.64-201ENST00000362845 102 ntBASIC3.1□□□□□ -1.91
ATP2B3Q16720 VTRNA1-1-201ENST00000363120 99 ntBASIC3.1□□□□□ -1.91
ATP2B3Q16720 Y_RNA.105-201ENST00000363182 111 ntBASIC3.1□□□□□ -1.91
ATP2B3Q16720 Y_RNA.193-201ENST00000363979 102 ntBASIC3.1□□□□□ -1.91
ATP2B3Q16720 Y_RNA.214-201ENST00000364201 112 ntBASIC3.1□□□□□ -1.91
ATP2B3Q16720 RNA5SP126-201ENST00000365092 109 ntBASIC3.1□□□□□ -1.91
ATP2B3Q16720 RNU6-142P-201ENST00000384019 107 ntBASIC3.1□□□□□ -1.91
ATP2B3Q16720 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
ATP2B3Q16720 RNU6-1109P-201ENST00000391187 107 ntBASIC3.1□□□□□ -1.91
ATP2B3Q16720 RPL21P1-201ENST00000399532 476 ntBASIC3.1□□□□□ -1.91
ATP2B3Q16720 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.1□□□□□ -1.91
ATP2B3Q16720 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.1□□□□□ -1.91
ATP2B3Q16720 AC090617.3-201ENST00000573670 475 ntBASIC3.1□□□□□ -1.91
ATP2B3Q16720 MIR3149-201ENST00000584629 83 ntBASIC3.1□□□□□ -1.91
ATP2B3Q16720 AL356157.2-201ENST00000605122 111 ntBASIC3.1□□□□□ -1.91
ATP2B3Q16720 U4.3-201ENST00000621047 82 ntBASIC3.1□□□□□ -1.91
ATP2B3Q16720 U6.92-201ENST00000636464 89 ntBASIC3.1□□□□□ -1.91
ATP2B3Q16720 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ATP2B3Q16720 Z75746.1-201ENST00000440243 2080 ntBASIC3.1□□□□□ -1.91
ATP2B3Q16720 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ATP2B3Q16720 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.09□□□□□ -1.91
ATP2B3Q16720 Y_RNA.176-201ENST00000363815 109 ntBASIC3.09□□□□□ -1.91
ATP2B3Q16720 SNORD115-32-201ENST00000364079 82 ntBASIC3.09□□□□□ -1.91
ATP2B3Q16720 Y_RNA.319-201ENST00000365138 92 ntBASIC3.09□□□□□ -1.91
ATP2B3Q16720 Y_RNA.380-201ENST00000365663 111 ntBASIC3.09□□□□□ -1.91
ATP2B3Q16720 RNU6-926P-201ENST00000384075 107 ntBASIC3.09□□□□□ -1.91
ATP2B3Q16720 MIR153-2-201ENST00000385225 87 ntBASIC3.09□□□□□ -1.91
ATP2B3Q16720 WARS2P1-201ENST00000429678 537 ntBASIC3.09□□□□□ -1.91
ATP2B3Q16720 USP9YP16-201ENST00000430287 407 ntBASIC3.09□□□□□ -1.91
ATP2B3Q16720 RPEP5-201ENST00000441137 268 ntBASIC3.09□□□□□ -1.91
ATP2B3Q16720 EEF1B2P7-201ENST00000451177 676 ntBASIC3.09□□□□□ -1.91
ATP2B3Q16720 USP9YP23-201ENST00000455085 407 ntBASIC3.09□□□□□ -1.91
ATP2B3Q16720 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.09□□□□□ -1.91
ATP2B3Q16720 RPL31P41-201ENST00000477967 372 ntBASIC3.09□□□□□ -1.91
ATP2B3Q16720 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.09□□□□□ -1.91
ATP2B3Q16720 AL442163.3-201ENST00000554110 156 ntBASIC3.09□□□□□ -1.91
ATP2B3Q16720 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.09□□□□□ -1.91
ATP2B3Q16720 AC105137.2-201ENST00000569073 466 ntBASIC3.09□□□□□ -1.91
ATP2B3Q16720 MIR5695-201ENST00000579717 85 ntBASIC3.09□□□□□ -1.91
ATP2B3Q16720 RPS29P30-201ENST00000600975 111 ntBASIC3.09□□□□□ -1.91
ATP2B3Q16720 AL390123.1-201ENST00000603216 237 ntBASIC3.09□□□□□ -1.91
ATP2B3Q16720 RMST_6.1-201ENST00000611980 203 ntBASIC3.09□□□□□ -1.91
ATP2B3Q16720 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.09□□□□□ -1.91
ATP2B3Q16720 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
ATP2B3Q16720 AC002543.1-201ENST00000299783 1954 ntBASIC3.09□□□□□ -1.92
ATP2B3Q16720 RNU6-1301P-201ENST00000362724 104 ntBASIC3.08□□□□□ -1.92
ATP2B3Q16720 Y_RNA.396-201ENST00000383949 103 ntBASIC3.08□□□□□ -1.92
ATP2B3Q16720 SNORD21-201ENST00000383953 95 ntBASIC3.08□□□□□ -1.92
ATP2B3Q16720 RNU6-541P-201ENST00000384709 110 ntBASIC3.08□□□□□ -1.92
ATP2B3Q16720 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
ATP2B3Q16720 SNORA26.3-201ENST00000391119 136 ntBASIC3.08□□□□□ -1.92
ATP2B3Q16720 AC078809.1-201ENST00000427601 140 ntBASIC3.08□□□□□ -1.92
ATP2B3Q16720 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.08□□□□□ -1.92
ATP2B3Q16720 OSTCP8-201ENST00000445117 448 ntBASIC3.08□□□□□ -1.92
ATP2B3Q16720 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.08□□□□□ -1.92
ATP2B3Q16720 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.08□□□□□ -1.92
ATP2B3Q16720 AIG1P1-201ENST00000503376 148 ntBASIC3.08□□□□□ -1.92
ATP2B3Q16720 RNY3P15-201ENST00000516297 97 ntBASIC3.08□□□□□ -1.92
ATP2B3Q16720 RNU6-911P-201ENST00000516523 104 ntBASIC3.08□□□□□ -1.92
ATP2B3Q16720 RNU6-56P-201ENST00000516986 93 ntBASIC3.08□□□□□ -1.92
ATP2B3Q16720 RNU6-897P-201ENST00000517135 105 ntBASIC3.08□□□□□ -1.92
ATP2B3Q16720 AC021231.3-201ENST00000558497 370 ntBASIC3.08□□□□□ -1.92
ATP2B3Q16720 AC125232.2-201ENST00000592457 143 ntBASIC3.08□□□□□ -1.92
ATP2B3Q16720 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.08□□□□□ -1.92
ATP2B3Q16720 AC096772.1-201ENST00000609146 564 ntBASIC3.08□□□□□ -1.92
ATP2B3Q16720 AC007792.1-201ENST00000623023 402 ntBASIC3.08□□□□□ -1.92
ATP2B3Q16720 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.08□□□□□ -1.92
ATP2B3Q16720 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
ATP2B3Q16720 AC092268.1-201ENST00000342691 405 ntBASIC3.07□□□□□ -1.92
ATP2B3Q16720 RNU6-879P-201ENST00000364328 108 ntBASIC3.07□□□□□ -1.92
ATP2B3Q16720 RNU4-50P-201ENST00000364361 141 ntBASIC3.07□□□□□ -1.92
ATP2B3Q16720 DEFA7P-201ENST00000382676 285 ntBASIC3.07□□□□□ -1.92
ATP2B3Q16720 Y_RNA.458-201ENST00000384240 102 ntBASIC3.07□□□□□ -1.92
ATP2B3Q16720 RNU6-318P-201ENST00000384283 103 ntBASIC3.07□□□□□ -1.92
ATP2B3Q16720 Y_RNA.551-201ENST00000384661 102 ntBASIC3.07□□□□□ -1.92
ATP2B3Q16720 MIR10B-201ENST00000385011 110 ntBASIC3.07□□□□□ -1.92
ATP2B3Q16720 RNU2-20P-201ENST00000410425 191 ntBASIC3.07□□□□□ -1.92
ATP2B3Q16720 MTCO3P19-201ENST00000415864 321 ntBASIC3.07□□□□□ -1.92
ATP2B3Q16720 AC012306.1-201ENST00000423267 114 ntBASIC3.07□□□□□ -1.92
ATP2B3Q16720 AIMP1P2-201ENST00000425294 312 ntBASIC3.07□□□□□ -1.92
ATP2B3Q16720 EIF1P2-201ENST00000428233 350 ntBASIC3.07□□□□□ -1.92
ATP2B3Q16720 PCNPP5-201ENST00000452246 481 ntBASIC3.07□□□□□ -1.92
ATP2B3Q16720 RPL36AP48-201ENST00000485521 314 ntBASIC3.07□□□□□ -1.92
ATP2B3Q16720 AC093852.1-201ENST00000503587 266 ntBASIC3.07□□□□□ -1.92
ATP2B3Q16720 SNORA31.15-201ENST00000516771 132 ntBASIC3.07□□□□□ -1.92
ATP2B3Q16720 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.07□□□□□ -1.92
ATP2B3Q16720 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.07□□□□□ -1.92
ATP2B3Q16720 AC034114.1-201ENST00000520293 285 ntBASIC3.07□□□□□ -1.92
ATP2B3Q16720 HSPE1P20-201ENST00000538133 289 ntBASIC3.07□□□□□ -1.92
ATP2B3Q16720 AP002770.2-201ENST00000543613 532 ntBASIC3.07□□□□□ -1.92
ATP2B3Q16720 PRR13P7-201ENST00000605538 430 ntBASIC3.07□□□□□ -1.92
ATP2B3Q16720 AL137847.3-201ENST00000611521 109 ntBASIC3.07□□□□□ -1.92
ATP2B3Q16720 CTSLP2-204ENST00000629029 392 ntBASIC3.07□□□□□ -1.92
ATP2B3Q16720 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
ATP2B3Q16720 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.07□□□□□ -1.92
ATP2B3Q16720 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.07□□□□□ -1.92
ATP2B3Q16720 Y_RNA.27-201ENST00000362540 103 ntBASIC3.06□□□□□ -1.92
ATP2B3Q16720 SNORD114-19-201ENST00000363072 75 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms