Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 RNU6-507P-201ENST00000516045 100 ntBASIC2.1□□□□□ -2.07
CDK3Q00526 Y_RNA.702-201ENST00000516843 96 ntBASIC2.1□□□□□ -2.07
CDK3Q00526 AL590705.4-201ENST00000532209 134 ntBASIC2.1□□□□□ -2.07
CDK3Q00526 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.1□□□□□ -2.07
CDK3Q00526 MYL12BP1-201ENST00000569826 507 ntBASIC2.1□□□□□ -2.07
CDK3Q00526 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.1□□□□□ -2.07
CDK3Q00526 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.1□□□□□ -2.07
CDK3Q00526 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CDK3Q00526 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CDK3Q00526 RNU6-595P-201ENST00000363944 107 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 SNORD115-32-201ENST00000364079 82 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 Y_RNA.404-201ENST00000383978 102 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 U8.10-201ENST00000384260 133 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 Y_RNA.474-201ENST00000384341 102 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 AL079342.1-201ENST00000401460 267 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 SRIP3-201ENST00000413200 219 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.09□□□□□ -2.07
CDK3Q00526 AC093019.1-201ENST00000443135 252 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 AL035666.1-201ENST00000446195 348 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 HMGN2P18-201ENST00000450680 270 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 RNU7-14P-201ENST00000459331 62 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 ATP5EP1-201ENST00000510257 156 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 RNA5SP384-201ENST00000516615 116 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 RNU6-1213P-201ENST00000517075 94 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.09□□□□□ -2.07
CDK3Q00526 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 DEFB131C-201ENST00000528817 165 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 ANP32BP3-201ENST00000559213 706 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.09□□□□□ -2.07
CDK3Q00526 AC113139.1-201ENST00000605049 239 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 RPL17P51-201ENST00000605218 238 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 RMST_6.1-201ENST00000611980 203 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.09□□□□□ -2.07
CDK3Q00526 AC104260.1-201ENST00000616660 539 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 AC005562.2-201ENST00000618264 111 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 AL669831.3-213ENST00000636676 183 ntBASIC2.09□□□□□ -2.07
CDK3Q00526 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
CDK3Q00526 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.08
CDK3Q00526 AP006437.1-201ENST00000641440 3685 ntBASIC2.09□□□□□ -2.08
CDK3Q00526 MIRLET7G-201ENST00000362280 84 ntBASIC2.08□□□□□ -2.08
CDK3Q00526 RNU6-331P-201ENST00000384724 107 ntBASIC2.08□□□□□ -2.08
CDK3Q00526 MIR153-2-201ENST00000385225 87 ntBASIC2.08□□□□□ -2.08
CDK3Q00526 RNU6-1009P-201ENST00000390996 107 ntBASIC2.08□□□□□ -2.08
CDK3Q00526 RNU6-1304P-201ENST00000411374 106 ntBASIC2.08□□□□□ -2.08
CDK3Q00526 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.08□□□□□ -2.08
CDK3Q00526 USMG5P1-201ENST00000425964 177 ntBASIC2.08□□□□□ -2.08
CDK3Q00526 MTCO3P29-201ENST00000432119 779 ntBASIC2.08□□□□□ -2.08
CDK3Q00526 RPL23AP50-201ENST00000434149 455 ntBASIC2.08□□□□□ -2.08
CDK3Q00526 MTATP6P23-201ENST00000440153 476 ntBASIC2.08□□□□□ -2.08
CDK3Q00526 RN7SKP210-201ENST00000459176 261 ntBASIC2.08□□□□□ -2.08
CDK3Q00526 AC007215.1-201ENST00000464893 276 ntBASIC2.08□□□□□ -2.08
CDK3Q00526 RPS23P5-201ENST00000495419 428 ntBASIC2.08□□□□□ -2.08
CDK3Q00526 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.08□□□□□ -2.08
CDK3Q00526 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.08□□□□□ -2.08
CDK3Q00526 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.08□□□□□ -2.08
CDK3Q00526 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.08□□□□□ -2.08
CDK3Q00526 RNU7-175P-201ENST00000515915 61 ntBASIC2.08□□□□□ -2.08
CDK3Q00526 RNU2-44P-201ENST00000516795 194 ntBASIC2.08□□□□□ -2.08
CDK3Q00526 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.08□□□□□ -2.08
CDK3Q00526 AC026470.2-201ENST00000561492 181 ntBASIC2.08□□□□□ -2.08
CDK3Q00526 AC009127.3-201ENST00000570531 403 ntBASIC2.08□□□□□ -2.08
CDK3Q00526 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.08□□□□□ -2.08
CDK3Q00526 AC092881.1-201ENST00000638218 2733 ntBASIC2.08□□□□□ -2.08
CDK3Q00526 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.08□□□□□ -2.08
CDK3Q00526 ZNF204P-201ENST00000416749 2397 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 RNU1-76P-201ENST00000362903 159 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 Y_RNA.405-201ENST00000383979 100 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 Y_RNA.451-201ENST00000384200 100 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 SNORD14D-201ENST00000384390 87 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 Y_RNA.490-201ENST00000384413 102 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 Y_RNA.524-201ENST00000384564 100 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 Y_RNA.561-201ENST00000384694 100 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 HMGN2P39-201ENST00000398005 273 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 AL353997.1-201ENST00000432936 108 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 AC004386.2-201ENST00000441858 148 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 AC010095.1-201ENST00000443543 144 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 AC245102.2-201ENST00000448956 180 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 snoU13.15-201ENST00000459407 104 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 TOMM22P6-201ENST00000465035 409 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 AC107222.1-201ENST00000510899 637 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 RNU6-559P-201ENST00000516151 98 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 RNA5SP82-201ENST00000516707 92 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.07□□□□□ -2.08
CDK3Q00526 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.07□□□□□ -2.08
CDK3Q00526 MIR5006-201ENST00000583027 110 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.07□□□□□ -2.08
CDK3Q00526 AC005014.2-201ENST00000607795 599 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.07□□□□□ -2.08
CDK3Q00526 MIR6895-201ENST00000613497 78 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 AC025253.1-201ENST00000613623 543 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 AC012640.5-201ENST00000623897 319 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 MIR1302-1-201ENST00000637932 143 ntBASIC2.07□□□□□ -2.08
CDK3Q00526 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CDK3Q00526 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CDK3Q00526 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CDK3Q00526 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CDK3Q00526 Y_RNA.319-201ENST00000365138 92 ntBASIC2.06□□□□□ -2.08
CDK3Q00526 RNU6-438P-201ENST00000365561 103 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms