Protein–RNA interactions for Protein: P78367

NKX3-2, Homeobox protein Nkx-3.2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2P78367 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.4□□□□□ -1.87
NKX3-2P78367 AC006001.4-201ENST00000622243 395 ntBASIC3.4□□□□□ -1.87
NKX3-2P78367 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
NKX3-2P78367 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
NKX3-2P78367 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NKX3-2P78367 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NKX3-2P78367 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
NKX3-2P78367 ZNF204P-201ENST00000416749 2397 ntBASIC3.39□□□□□ -1.87
NKX3-2P78367 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
NKX3-2P78367 MIR449A-201ENST00000362113 91 ntBASIC3.39□□□□□ -1.87
NKX3-2P78367 Y_RNA.230-201ENST00000364348 109 ntBASIC3.39□□□□□ -1.87
NKX3-2P78367 Y_RNA.383-201ENST00000383855 97 ntBASIC3.39□□□□□ -1.87
NKX3-2P78367 RNU6-662P-201ENST00000384253 104 ntBASIC3.39□□□□□ -1.87
NKX3-2P78367 AL591034.1-201ENST00000407447 340 ntBASIC3.39□□□□□ -1.87
NKX3-2P78367 AC023141.4-201ENST00000412031 328 ntBASIC3.39□□□□□ -1.87
NKX3-2P78367 TRIAP1P1-201ENST00000427062 225 ntBASIC3.39□□□□□ -1.87
NKX3-2P78367 AC112220.1-201ENST00000434628 355 ntBASIC3.39□□□□□ -1.87
NKX3-2P78367 AL161651.1-201ENST00000440882 223 ntBASIC3.39□□□□□ -1.87
NKX3-2P78367 AC090525.1-201ENST00000479116 478 ntBASIC3.39□□□□□ -1.87
NKX3-2P78367 RN7SKP132-201ENST00000516001 208 ntBASIC3.39□□□□□ -1.87
NKX3-2P78367 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.39□□□□□ -1.87
NKX3-2P78367 Y_RNA.679-201ENST00000516416 91 ntBASIC3.39□□□□□ -1.87
NKX3-2P78367 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.39□□□□□ -1.87
NKX3-2P78367 Z83818.1-201ENST00000603584 150 ntBASIC3.39□□□□□ -1.87
NKX3-2P78367 MIR3199-2-201ENST00000636243 86 ntBASIC3.39□□□□□ -1.87
NKX3-2P78367 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.39□□□□□ -1.87
NKX3-2P78367 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
NKX3-2P78367 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.39□□□□□ -1.87
NKX3-2P78367 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NKX3-2P78367 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.38□□□□□ -1.87
NKX3-2P78367 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.38□□□□□ -1.87
NKX3-2P78367 MIR30E-201ENST00000362104 92 ntBASIC3.38□□□□□ -1.87
NKX3-2P78367 RNU6-514P-201ENST00000384208 107 ntBASIC3.38□□□□□ -1.87
NKX3-2P78367 RNU6-378P-201ENST00000384324 107 ntBASIC3.38□□□□□ -1.87
NKX3-2P78367 RNU6-1289P-201ENST00000384431 106 ntBASIC3.38□□□□□ -1.87
NKX3-2P78367 SNORD67-201ENST00000390833 111 ntBASIC3.38□□□□□ -1.87
NKX3-2P78367 AL133475.1-201ENST00000404414 305 ntBASIC3.38□□□□□ -1.87
NKX3-2P78367 Y_RNA.595-201ENST00000410403 105 ntBASIC3.38□□□□□ -1.87
NKX3-2P78367 RN7SKP51-201ENST00000410781 304 ntBASIC3.38□□□□□ -1.87
NKX3-2P78367 RPS26P42-201ENST00000413485 326 ntBASIC3.38□□□□□ -1.87
NKX3-2P78367 AL390729.2-201ENST00000416137 156 ntBASIC3.38□□□□□ -1.87
NKX3-2P78367 POLR2KP2-201ENST00000438155 177 ntBASIC3.38□□□□□ -1.87
NKX3-2P78367 AC105272.1-201ENST00000438604 198 ntBASIC3.38□□□□□ -1.87
NKX3-2P78367 COX6CP14-201ENST00000469580 174 ntBASIC3.38□□□□□ -1.87
NKX3-2P78367 RNU1-61P-201ENST00000516107 151 ntBASIC3.38□□□□□ -1.87
NKX3-2P78367 SNORA27.4-201ENST00000516650 95 ntBASIC3.38□□□□□ -1.87
NKX3-2P78367 RNA5SP54-201ENST00000516951 92 ntBASIC3.38□□□□□ -1.87
NKX3-2P78367 RNU6-1212P-201ENST00000517023 104 ntBASIC3.38□□□□□ -1.87
NKX3-2P78367 MIR3945-201ENST00000581853 98 ntBASIC3.38□□□□□ -1.87
NKX3-2P78367 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.38□□□□□ -1.87
NKX3-2P78367 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NKX3-2P78367 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
NKX3-2P78367 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NKX3-2P78367 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NKX3-2P78367 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.37□□□□□ -1.87
NKX3-2P78367 MTND5P35-201ENST00000557537 1720 ntBASIC3.37□□□□□ -1.87
NKX3-2P78367 AC062016.1-201ENST00000355719 319 ntBASIC3.37□□□□□ -1.87
NKX3-2P78367 UBE2WP1-201ENST00000362030 340 ntBASIC3.37□□□□□ -1.87
NKX3-2P78367 Y_RNA.82-201ENST00000363000 102 ntBASIC3.37□□□□□ -1.87
NKX3-2P78367 Y_RNA.92-201ENST00000363043 102 ntBASIC3.37□□□□□ -1.87
NKX3-2P78367 Y_RNA.136-201ENST00000363444 102 ntBASIC3.37□□□□□ -1.87
NKX3-2P78367 RNU6-799P-201ENST00000363567 107 ntBASIC3.37□□□□□ -1.87
NKX3-2P78367 Y_RNA.235-201ENST00000364412 102 ntBASIC3.37□□□□□ -1.87
NKX3-2P78367 Y_RNA.306-201ENST00000365015 102 ntBASIC3.37□□□□□ -1.87
NKX3-2P78367 Y_RNA.312-201ENST00000365089 102 ntBASIC3.37□□□□□ -1.87
NKX3-2P78367 Y_RNA.322-201ENST00000365151 102 ntBASIC3.37□□□□□ -1.87
NKX3-2P78367 RNU6-487P-201ENST00000365430 104 ntBASIC3.37□□□□□ -1.87
NKX3-2P78367 RNU6-125P-201ENST00000384505 107 ntBASIC3.37□□□□□ -1.87
NKX3-2P78367 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
NKX3-2P78367 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.37□□□□□ -1.87
NKX3-2P78367 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.37□□□□□ -1.87
NKX3-2P78367 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.37□□□□□ -1.87
NKX3-2P78367 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.37□□□□□ -1.87
NKX3-2P78367 Y_RNA.650-201ENST00000459002 102 ntBASIC3.37□□□□□ -1.87
NKX3-2P78367 Y_RNA.638-201ENST00000459374 113 ntBASIC3.37□□□□□ -1.87
NKX3-2P78367 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.37□□□□□ -1.87
NKX3-2P78367 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.37□□□□□ -1.87
NKX3-2P78367 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.37□□□□□ -1.87
NKX3-2P78367 Y_RNA.777-201ENST00000516982 102 ntBASIC3.37□□□□□ -1.87
NKX3-2P78367 MIR3910-1-201ENST00000580936 111 ntBASIC3.37□□□□□ -1.87
NKX3-2P78367 Y_RNA.771-201ENST00000598668 102 ntBASIC3.37□□□□□ -1.87
NKX3-2P78367 AL133393.1-201ENST00000603277 287 ntBASIC3.37□□□□□ -1.87
NKX3-2P78367 AC022441.3-201ENST00000605737 136 ntBASIC3.37□□□□□ -1.87
NKX3-2P78367 AL590240.4-201ENST00000616908 390 ntBASIC3.37□□□□□ -1.87
NKX3-2P78367 Y_RNA.789-201ENST00000622480 102 ntBASIC3.37□□□□□ -1.87
NKX3-2P78367 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
NKX3-2P78367 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NKX3-2P78367 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.37□□□□□ -1.87
NKX3-2P78367 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.36□□□□□ -1.87
NKX3-2P78367 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NKX3-2P78367 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NKX3-2P78367 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
NKX3-2P78367 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NKX3-2P78367 RNU6-1020P-201ENST00000363684 107 ntBASIC3.36□□□□□ -1.87
NKX3-2P78367 Y_RNA.506-201ENST00000384494 102 ntBASIC3.36□□□□□ -1.87
NKX3-2P78367 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.36□□□□□ -1.87
NKX3-2P78367 RNA5SP184-201ENST00000411071 108 ntBASIC3.36□□□□□ -1.87
NKX3-2P78367 RPL23AP36-201ENST00000413895 458 ntBASIC3.36□□□□□ -1.87
NKX3-2P78367 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.36□□□□□ -1.87
NKX3-2P78367 RPS12P18-201ENST00000442381 270 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms