Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 CETN4P-201ENST00000432407 469 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 AC119618.1-201ENST00000434191 222 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 RNU7-21P-201ENST00000459430 62 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 AC007547.1-201ENST00000462177 490 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 SNORA43.2-201ENST00000516652 128 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.08□□□□□ -2.4
ABCA4P78363 IGKV1-22-201ENST00000524313 326 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.08□□□□□ -2.4
ABCA4P78363 AC025627.3-201ENST00000582078 182 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 AL162424.1-201ENST00000602325 221 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 CTHRC1P1-201ENST00000605383 469 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 SNORD98-201ENST00000636377 67 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 AC092104.1-201ENST00000497346 1441 ntBASIC0.08□□□□□ -2.4
ABCA4P78363 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
ABCA4P78363 RNU6-369P-201ENST00000362515 102 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 SNORD114-16-201ENST00000363044 70 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 RNA5SP214-201ENST00000363378 118 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 SNORD114-9-201ENST00000364370 72 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 snoZ40.1-201ENST00000364540 72 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 SMIM11P1-201ENST00000369586 178 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 SNORA26.3-201ENST00000391119 136 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 AL354692.1-201ENST00000423044 315 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 AC007969.2-201ENST00000441891 191 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 SNORD126-201ENST00000459475 77 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 AC108740.1-201ENST00000498629 225 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.07□□□□□ -2.4
ABCA4P78363 AC106038.2-201ENST00000520706 568 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.07□□□□□ -2.4
ABCA4P78363 AC141557.1-201ENST00000540982 400 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 AC090517.1-201ENST00000569307 266 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 MIR4290-201ENST00000583807 95 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 AL353765.1-201ENST00000605514 183 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 SNORA42.1-201ENST00000363515 137 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 RNU6-560P-201ENST00000364007 108 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 RNU4-48P-201ENST00000365559 182 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 MIR760-201ENST00000390220 80 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 AL451046.2-201ENST00000403074 277 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 USP9YP21-201ENST00000420603 432 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.07□□□□□ -2.4
ABCA4P78363 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.07□□□□□ -2.4
ABCA4P78363 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.07□□□□□ -2.4
ABCA4P78363 AC022493.2-201ENST00000506122 481 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 SNORD111.1-201ENST00000516421 86 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 AC115990.1-201ENST00000526957 301 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 ZNF321P-202ENST00000550843 495 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 MTATP6P2-201ENST00000603319 678 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.07□□□□□ -2.4
ABCA4P78363 RNU6-792P-201ENST00000363490 107 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 RNU6-534P-201ENST00000364877 106 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 RNU6-1327P-201ENST00000365302 105 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 SNORA32.3-201ENST00000384772 121 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 RPL17P35-201ENST00000432217 549 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 AL031313.1-201ENST00000448435 256 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 AC022364.2-201ENST00000457963 554 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 LINC01399-202ENST00000458450 244 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.06□□□□□ -2.4
ABCA4P78363 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.06□□□□□ -2.4
ABCA4P78363 AC012409.4-201ENST00000612923 249 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 AC090517.2-201ENST00000614966 680 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.06□□□□□ -2.4
ABCA4P78363 SNORD114-31-201ENST00000363219 75 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 RNU6-777P-201ENST00000364265 104 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 SNORD114-3-201ENST00000364969 75 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 SNORD116-13-201ENST00000384408 92 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 RNA5SP219-201ENST00000390940 113 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 MIR548H2-201ENST00000408874 88 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 RN7SKP266-201ENST00000410232 287 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 RPS26P42-201ENST00000413485 326 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.06□□□□□ -2.4
ABCA4P78363 SNORA68.3-201ENST00000515906 83 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 RNU6-1102P-201ENST00000516149 96 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 RNU6-947P-201ENST00000516264 106 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 DEFB130C-202ENST00000530001 230 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 RNY1P9-201ENST00000532431 109 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 AL034555.1-201ENST00000604816 211 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 AC023158.2-201ENST00000614876 543 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 AP000484.1-201ENST00000620067 1252 ntBASIC0.06□□□□□ -2.4
ABCA4P78363 MIR1283-1-201ENST00000408494 87 ntBASIC0.05□□□□□ -2.4
ABCA4P78363 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.05□□□□□ -2.4
ABCA4P78363 AL606662.1-201ENST00000445763 553 ntBASIC0.05□□□□□ -2.4
ABCA4P78363 snoU13.21-201ENST00000459368 105 ntBASIC0.05□□□□□ -2.4
ABCA4P78363 AP000797.1-201ENST00000478870 387 ntBASIC0.05□□□□□ -2.4
ABCA4P78363 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.05□□□□□ -2.4
ABCA4P78363 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.05□□□□□ -2.4
ABCA4P78363 AC079395.1-201ENST00000510981 262 ntBASIC0.05□□□□□ -2.4
ABCA4P78363 AC024995.1-201ENST00000523014 93 ntBASIC0.05□□□□□ -2.4
ABCA4P78363 AC090049.2-201ENST00000550377 109 ntBASIC0.05□□□□□ -2.4
ABCA4P78363 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.05□□□□□ -2.4
ABCA4P78363 MIR3146-201ENST00000580367 79 ntBASIC0.05□□□□□ -2.4
ABCA4P78363 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.05□□□□□ -2.4
ABCA4P78363 AL356157.2-201ENST00000605122 111 ntBASIC0.05□□□□□ -2.4
ABCA4P78363 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.05□□□□□ -2.4
ABCA4P78363 AC078938.1-201ENST00000620993 318 ntBASIC0.05□□□□□ -2.4
ABCA4P78363 BX322639.1-202ENST00000423987 2213 ntBASIC0.05□□□□□ -2.4
ABCA4P78363 RNU6-1285P-201ENST00000363480 105 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 Y_RNA.495-201ENST00000384435 112 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 RNU2-3P-201ENST00000410144 191 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 RPL23AP50-201ENST00000434149 455 ntBASIC0.04□□□□□ -2.4
ABCA4P78363 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms