Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 MIR329-1-201ENST00000385028 80 ntBASIC3.34□□□□□ -1.87
HERVK_113P62684 RNU6-750P-201ENST00000390946 107 ntBASIC3.34□□□□□ -1.87
HERVK_113P62684 SNORA26.3-201ENST00000391119 136 ntBASIC3.34□□□□□ -1.87
HERVK_113P62684 MIR208B-201ENST00000401172 77 ntBASIC3.34□□□□□ -1.87
HERVK_113P62684 AL603910.2-201ENST00000407268 136 ntBASIC3.34□□□□□ -1.87
HERVK_113P62684 RNU4-30P-201ENST00000410245 143 ntBASIC3.34□□□□□ -1.87
HERVK_113P62684 AC244505.4-201ENST00000434905 287 ntBASIC3.34□□□□□ -1.87
HERVK_113P62684 AC005002.2-201ENST00000438228 269 ntBASIC3.34□□□□□ -1.87
HERVK_113P62684 SSXP5-201ENST00000443473 287 ntBASIC3.34□□□□□ -1.87
HERVK_113P62684 AL139109.1-201ENST00000455491 297 ntBASIC3.34□□□□□ -1.87
HERVK_113P62684 RN7SKP43-201ENST00000516173 320 ntBASIC3.34□□□□□ -1.87
HERVK_113P62684 SNORA31.6-201ENST00000516241 130 ntBASIC3.34□□□□□ -1.87
HERVK_113P62684 SNORA31.21-201ENST00000517180 77 ntBASIC3.34□□□□□ -1.87
HERVK_113P62684 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.34□□□□□ -1.87
HERVK_113P62684 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
HERVK_113P62684 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HERVK_113P62684 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.33□□□□□ -1.88
HERVK_113P62684 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HERVK_113P62684 RNU6-529P-201ENST00000363383 104 ntBASIC3.33□□□□□ -1.88
HERVK_113P62684 SNORD115-8-201ENST00000363856 82 ntBASIC3.33□□□□□ -1.88
HERVK_113P62684 SNORD115-38-201ENST00000365037 82 ntBASIC3.33□□□□□ -1.88
HERVK_113P62684 RNU6-338P-201ENST00000383888 105 ntBASIC3.33□□□□□ -1.88
HERVK_113P62684 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.33□□□□□ -1.88
HERVK_113P62684 AC010095.1-201ENST00000443543 144 ntBASIC3.33□□□□□ -1.88
HERVK_113P62684 SNORD109B-201ENST00000458961 67 ntBASIC3.33□□□□□ -1.88
HERVK_113P62684 SNORD109A-201ENST00000459128 67 ntBASIC3.33□□□□□ -1.88
HERVK_113P62684 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.33□□□□□ -1.88
HERVK_113P62684 RNU5F-2P-201ENST00000516066 82 ntBASIC3.33□□□□□ -1.88
HERVK_113P62684 RNU6-496P-201ENST00000516145 99 ntBASIC3.33□□□□□ -1.88
HERVK_113P62684 SNORA25.14-201ENST00000516481 132 ntBASIC3.33□□□□□ -1.88
HERVK_113P62684 RNU7-110P-201ENST00000516891 62 ntBASIC3.33□□□□□ -1.88
HERVK_113P62684 RNA5SP54-201ENST00000516951 92 ntBASIC3.33□□□□□ -1.88
HERVK_113P62684 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.33□□□□□ -1.88
HERVK_113P62684 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.33□□□□□ -1.88
HERVK_113P62684 AC025281.1-201ENST00000567026 265 ntBASIC3.33□□□□□ -1.88
HERVK_113P62684 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.33□□□□□ -1.88
HERVK_113P62684 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HERVK_113P62684 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HERVK_113P62684 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
HERVK_113P62684 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
HERVK_113P62684 AC010680.1-201ENST00000590024 3590 ntBASIC3.33□□□□□ -1.88
HERVK_113P62684 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HERVK_113P62684 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.33□□□□□ -1.88
HERVK_113P62684 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HERVK_113P62684 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HERVK_113P62684 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HERVK_113P62684 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HERVK_113P62684 Y_RNA.20-201ENST00000362479 113 ntBASIC3.32□□□□□ -1.88
HERVK_113P62684 RNU4-90P-201ENST00000362773 141 ntBASIC3.32□□□□□ -1.88
HERVK_113P62684 Y_RNA.65-201ENST00000362846 100 ntBASIC3.32□□□□□ -1.88
HERVK_113P62684 SNORD114-19-201ENST00000363072 75 ntBASIC3.32□□□□□ -1.88
HERVK_113P62684 Y_RNA.277-201ENST00000364754 102 ntBASIC3.32□□□□□ -1.88
HERVK_113P62684 RNU6-21P-201ENST00000384710 107 ntBASIC3.32□□□□□ -1.88
HERVK_113P62684 MIR181B1-201ENST00000385240 110 ntBASIC3.32□□□□□ -1.88
HERVK_113P62684 RNU2-52P-201ENST00000410680 190 ntBASIC3.32□□□□□ -1.88
HERVK_113P62684 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.32□□□□□ -1.88
HERVK_113P62684 AP001324.2-201ENST00000461163 319 ntBASIC3.32□□□□□ -1.88
HERVK_113P62684 AP004217.1-201ENST00000480579 346 ntBASIC3.32□□□□□ -1.88
HERVK_113P62684 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.32□□□□□ -1.88
HERVK_113P62684 CYP4A27P-201ENST00000567218 190 ntBASIC3.32□□□□□ -1.88
HERVK_113P62684 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.32□□□□□ -1.88
HERVK_113P62684 MIR3136-201ENST00000583498 78 ntBASIC3.32□□□□□ -1.88
HERVK_113P62684 AC010999.1-201ENST00000611856 324 ntBASIC3.32□□□□□ -1.88
HERVK_113P62684 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.32□□□□□ -1.88
HERVK_113P62684 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HERVK_113P62684 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HERVK_113P62684 MAPK10-322ENST00000641485 4530 ntBASIC3.32□□□□□ -1.88
HERVK_113P62684 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HERVK_113P62684 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HERVK_113P62684 AC093010.3-201ENST00000570269 15214 ntBASIC3.31□□□□□ -1.88
HERVK_113P62684 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HERVK_113P62684 RNU6-1266P-201ENST00000362794 105 ntBASIC3.31□□□□□ -1.88
HERVK_113P62684 RNU6-626P-201ENST00000363354 107 ntBASIC3.31□□□□□ -1.88
HERVK_113P62684 RNU6-290P-201ENST00000365212 101 ntBASIC3.31□□□□□ -1.88
HERVK_113P62684 Y_RNA.352-201ENST00000365439 102 ntBASIC3.31□□□□□ -1.88
HERVK_113P62684 RNU6-20P-201ENST00000384106 107 ntBASIC3.31□□□□□ -1.88
HERVK_113P62684 RNU6-1145P-201ENST00000384246 107 ntBASIC3.31□□□□□ -1.88
HERVK_113P62684 SNORD63-201ENST00000384262 68 ntBASIC3.31□□□□□ -1.88
HERVK_113P62684 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HERVK_113P62684 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HERVK_113P62684 Y_RNA.595-201ENST00000410403 105 ntBASIC3.31□□□□□ -1.88
HERVK_113P62684 RPS26P42-201ENST00000413485 326 ntBASIC3.31□□□□□ -1.88
HERVK_113P62684 AC096649.2-201ENST00000416186 393 ntBASIC3.31□□□□□ -1.88
HERVK_113P62684 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.31□□□□□ -1.88
HERVK_113P62684 MTND5P15-201ENST00000434246 349 ntBASIC3.31□□□□□ -1.88
HERVK_113P62684 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.31□□□□□ -1.88
HERVK_113P62684 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.31□□□□□ -1.88
HERVK_113P62684 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.31□□□□□ -1.88
HERVK_113P62684 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.31□□□□□ -1.88
HERVK_113P62684 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.31□□□□□ -1.88
HERVK_113P62684 SNORA40.9-201ENST00000515895 93 ntBASIC3.31□□□□□ -1.88
HERVK_113P62684 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.31□□□□□ -1.88
HERVK_113P62684 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.31□□□□□ -1.88
HERVK_113P62684 MIR3923-201ENST00000579521 83 ntBASIC3.31□□□□□ -1.88
HERVK_113P62684 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.31□□□□□ -1.88
HERVK_113P62684 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.31□□□□□ -1.88
HERVK_113P62684 AL034555.1-201ENST00000604816 211 ntBASIC3.31□□□□□ -1.88
HERVK_113P62684 RNU6-91P-201ENST00000607774 107 ntBASIC3.31□□□□□ -1.88
HERVK_113P62684 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.31□□□□□ -1.88
HERVK_113P62684 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms