Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 RNU6-1305P-201ENST00000364353 104 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
HIST1H2BDP58876 RNU6-945P-201ENST00000383947 107 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 U8.10-201ENST00000384260 133 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 SNORD116-13-201ENST00000384408 92 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 MIR586-201ENST00000385035 97 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 MIR122-201ENST00000385044 85 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 SNORD70.1-201ENST00000391007 85 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
HIST1H2BDP58876 AL451046.2-201ENST00000403074 277 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 AL031577.2-201ENST00000404133 280 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 MTND3P17-201ENST00000416968 344 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 AL606662.1-201ENST00000445763 553 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 AC009237.7-201ENST00000447357 229 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 USP9YP12-201ENST00000450481 570 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 MTCO3P8-201ENST00000453691 755 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 RPL39P39-201ENST00000455840 151 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 RNU7-95P-201ENST00000459222 64 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 AL049830.1-201ENST00000468034 425 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.32□□□□□ -2.36
HIST1H2BDP58876 RNU6-917P-201ENST00000516294 104 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 AC025647.1-201ENST00000517879 253 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 AC004812.1-201ENST00000540773 146 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.32□□□□□ -2.36
HIST1H2BDP58876 AL158050.2-201ENST00000605336 568 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 AC080078.3-201ENST00000605407 463 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 AL133173.2-201ENST00000614270 90 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 AC006927.3-201ENST00000638789 384 ntBASIC0.32□□□□□ -2.36
HIST1H2BDP58876 U3.8-201ENST00000363675 217 ntBASIC0.31□□□□□ -2.36
HIST1H2BDP58876 RNU6-266P-201ENST00000364225 107 ntBASIC0.31□□□□□ -2.36
HIST1H2BDP58876 RNU5E-5P-201ENST00000365379 116 ntBASIC0.31□□□□□ -2.36
HIST1H2BDP58876 RNU6-434P-201ENST00000384376 107 ntBASIC0.31□□□□□ -2.36
HIST1H2BDP58876 SNORA16.2-201ENST00000390991 127 ntBASIC0.31□□□□□ -2.36
HIST1H2BDP58876 RPL17P50-201ENST00000396131 546 ntBASIC0.31□□□□□ -2.36
HIST1H2BDP58876 RNU4-46P-201ENST00000410818 138 ntBASIC0.31□□□□□ -2.36
HIST1H2BDP58876 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.31□□□□□ -2.36
HIST1H2BDP58876 CDK8P2-201ENST00000415020 547 ntBASIC0.31□□□□□ -2.36
HIST1H2BDP58876 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.31□□□□□ -2.36
HIST1H2BDP58876 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.31□□□□□ -2.36
HIST1H2BDP58876 AC074290.1-201ENST00000448883 135 ntBASIC0.31□□□□□ -2.36
HIST1H2BDP58876 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.31□□□□□ -2.36
HIST1H2BDP58876 AL163540.1-201ENST00000485382 386 ntBASIC0.31□□□□□ -2.36
HIST1H2BDP58876 RN7SKP219-201ENST00000516825 296 ntBASIC0.31□□□□□ -2.36
HIST1H2BDP58876 RNU6-410P-201ENST00000517006 107 ntBASIC0.31□□□□□ -2.36
HIST1H2BDP58876 RNU2-46P-201ENST00000517038 113 ntBASIC0.31□□□□□ -2.36
HIST1H2BDP58876 RNU6-323P-201ENST00000521915 107 ntBASIC0.31□□□□□ -2.36
HIST1H2BDP58876 AC016256.1-201ENST00000547971 354 ntBASIC0.31□□□□□ -2.36
HIST1H2BDP58876 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.31□□□□□ -2.36
HIST1H2BDP58876 AC004584.2-201ENST00000570407 410 ntBASIC0.31□□□□□ -2.36
HIST1H2BDP58876 MIR4435-1-201ENST00000582552 80 ntBASIC0.31□□□□□ -2.36
HIST1H2BDP58876 AC098848.2-201ENST00000588023 330 ntBASIC0.31□□□□□ -2.36
HIST1H2BDP58876 RSL24D1P11-201ENST00000591045 491 ntBASIC0.31□□□□□ -2.36
HIST1H2BDP58876 AL357312.1-201ENST00000603879 298 ntBASIC0.31□□□□□ -2.36
HIST1H2BDP58876 AC009541.1-201ENST00000438279 2662 ntBASIC0.31□□□□□ -2.36
HIST1H2BDP58876 MTND4P5-201ENST00000435821 1374 ntBASIC0.31□□□□□ -2.36
HIST1H2BDP58876 AP000568.1-201ENST00000282964 442 ntBASIC0.3□□□□□ -2.36
HIST1H2BDP58876 RNU6-1240P-201ENST00000365155 104 ntBASIC0.3□□□□□ -2.36
HIST1H2BDP58876 MIR454-201ENST00000390180 115 ntBASIC0.3□□□□□ -2.36
HIST1H2BDP58876 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.3□□□□□ -2.36
HIST1H2BDP58876 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.3□□□□□ -2.36
HIST1H2BDP58876 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC0.3□□□□□ -2.36
HIST1H2BDP58876 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.3□□□□□ -2.36
HIST1H2BDP58876 EPS15P1-201ENST00000448836 336 ntBASIC0.3□□□□□ -2.36
HIST1H2BDP58876 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.3□□□□□ -2.36
HIST1H2BDP58876 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.3□□□□□ -2.36
HIST1H2BDP58876 Vault.3-201ENST00000516676 95 ntBASIC0.3□□□□□ -2.36
HIST1H2BDP58876 RNU7-128P-201ENST00000517247 62 ntBASIC0.3□□□□□ -2.36
HIST1H2BDP58876 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.3□□□□□ -2.36
HIST1H2BDP58876 AP002001.1-203ENST00000534002 267 ntBASIC0.3□□□□□ -2.36
HIST1H2BDP58876 MTND4P33-201ENST00000556706 766 ntBASIC0.3□□□□□ -2.36
HIST1H2BDP58876 AGGF1P4-201ENST00000568249 801 ntBASIC0.3□□□□□ -2.36
HIST1H2BDP58876 AL162424.1-201ENST00000602325 221 ntBASIC0.3□□□□□ -2.36
HIST1H2BDP58876 AP000907.4-201ENST00000604143 237 ntBASIC0.3□□□□□ -2.36
HIST1H2BDP58876 DLEU1_1.1-201ENST00000618107 190 ntBASIC0.3□□□□□ -2.36
HIST1H2BDP58876 snoZ196.1-201ENST00000625269 89 ntBASIC0.3□□□□□ -2.36
HIST1H2BDP58876 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.3□□□□□ -2.36
HIST1H2BDP58876 OR4G1P-203ENST00000641984 1631 ntBASIC0.29□□□□□ -2.36
HIST1H2BDP58876 SNORA2.2-201ENST00000365473 135 ntBASIC0.29□□□□□ -2.36
HIST1H2BDP58876 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.29□□□□□ -2.36
HIST1H2BDP58876 RNU6-1029P-201ENST00000384109 107 ntBASIC0.29□□□□□ -2.36
HIST1H2BDP58876 RNU6-74P-201ENST00000384235 107 ntBASIC0.29□□□□□ -2.36
HIST1H2BDP58876 SNORA67.2-201ENST00000384300 149 ntBASIC0.29□□□□□ -2.36
HIST1H2BDP58876 MIR508-201ENST00000384857 115 ntBASIC0.29□□□□□ -2.36
HIST1H2BDP58876 SNORD99-201ENST00000408612 74 ntBASIC0.29□□□□□ -2.36
HIST1H2BDP58876 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.29□□□□□ -2.36
HIST1H2BDP58876 AC092423.1-201ENST00000430165 186 ntBASIC0.29□□□□□ -2.36
HIST1H2BDP58876 AL445305.1-201ENST00000432577 575 ntBASIC0.29□□□□□ -2.36
HIST1H2BDP58876 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.29□□□□□ -2.36
HIST1H2BDP58876 TAF9P1-201ENST00000445421 515 ntBASIC0.29□□□□□ -2.36
HIST1H2BDP58876 TAF9P2-201ENST00000454958 515 ntBASIC0.29□□□□□ -2.36
HIST1H2BDP58876 RNU7-182P-201ENST00000459009 62 ntBASIC0.29□□□□□ -2.36
HIST1H2BDP58876 AC079140.5-201ENST00000507882 310 ntBASIC0.29□□□□□ -2.36
HIST1H2BDP58876 MTCO3P23-201ENST00000561363 289 ntBASIC0.29□□□□□ -2.36
HIST1H2BDP58876 AL360219.1-201ENST00000610230 366 ntBASIC0.29□□□□□ -2.36
HIST1H2BDP58876 RNU5B-2P-201ENST00000363036 113 ntBASIC0.28□□□□□ -2.36
HIST1H2BDP58876 RNU6-1127P-201ENST00000384580 107 ntBASIC0.28□□□□□ -2.36
HIST1H2BDP58876 AL355143.1-201ENST00000407101 841 ntBASIC0.28□□□□□ -2.36
HIST1H2BDP58876 RNU6-1186P-201ENST00000410429 97 ntBASIC0.28□□□□□ -2.36
HIST1H2BDP58876 RPS3AP3-201ENST00000411933 242 ntBASIC0.28□□□□□ -2.36
HIST1H2BDP58876 RPS26P42-201ENST00000413485 326 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms