Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC009831.4-201ENST00000620744 325 ntBASIC2.63□□□□□ -1.99
RHBDL3P58872 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RHBDL3P58872 ZNF702P-202ENST00000434269 1966 ntBASIC2.63□□□□□ -1.99
RHBDL3P58872 LINC02555-201ENST00000563933 1951 ntBASIC2.63□□□□□ -1.99
RHBDL3P58872 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RHBDL3P58872 BX322639.1-202ENST00000423987 2213 ntBASIC2.62□□□□□ -1.99
RHBDL3P58872 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.62□□□□□ -1.99
RHBDL3P58872 Y_RNA.160-201ENST00000363677 92 ntBASIC2.62□□□□□ -1.99
RHBDL3P58872 SNORA16B-201ENST00000364674 135 ntBASIC2.62□□□□□ -1.99
RHBDL3P58872 RNU6-245P-201ENST00000384020 107 ntBASIC2.62□□□□□ -1.99
RHBDL3P58872 MIR1283-2-201ENST00000408621 87 ntBASIC2.62□□□□□ -1.99
RHBDL3P58872 RNU6-174P-201ENST00000410406 106 ntBASIC2.62□□□□□ -1.99
RHBDL3P58872 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.62□□□□□ -1.99
RHBDL3P58872 SNORD5.1-201ENST00000458800 75 ntBASIC2.62□□□□□ -1.99
RHBDL3P58872 snoU13.30-201ENST00000458951 104 ntBASIC2.62□□□□□ -1.99
RHBDL3P58872 RN7SKP210-201ENST00000459176 261 ntBASIC2.62□□□□□ -1.99
RHBDL3P58872 AC107222.1-201ENST00000510899 637 ntBASIC2.62□□□□□ -1.99
RHBDL3P58872 RNA5SP200-201ENST00000516360 103 ntBASIC2.62□□□□□ -1.99
RHBDL3P58872 SCARNA16.3-201ENST00000516595 184 ntBASIC2.62□□□□□ -1.99
RHBDL3P58872 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.62□□□□□ -1.99
RHBDL3P58872 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.62□□□□□ -1.99
RHBDL3P58872 MIR5696-201ENST00000578474 85 ntBASIC2.62□□□□□ -1.99
RHBDL3P58872 MIR4753-201ENST00000585119 83 ntBASIC2.62□□□□□ -1.99
RHBDL3P58872 ZNF299P-201ENST00000406845 1804 ntBASIC2.62□□□□□ -1.99
RHBDL3P58872 AC092881.1-201ENST00000638218 2733 ntBASIC2.62□□□□□ -1.99
RHBDL3P58872 SNORD115-8-201ENST00000363856 82 ntBASIC2.61□□□□□ -1.99
RHBDL3P58872 SNORD115-38-201ENST00000365037 82 ntBASIC2.61□□□□□ -1.99
RHBDL3P58872 SNORA80E-201ENST00000384744 137 ntBASIC2.61□□□□□ -1.99
RHBDL3P58872 RNU6-876P-201ENST00000391295 104 ntBASIC2.61□□□□□ -1.99
RHBDL3P58872 AL033519.2-201ENST00000403958 392 ntBASIC2.61□□□□□ -1.99
RHBDL3P58872 MIR548K-201ENST00000408406 116 ntBASIC2.61□□□□□ -1.99
RHBDL3P58872 AC004386.2-201ENST00000441858 148 ntBASIC2.61□□□□□ -1.99
RHBDL3P58872 SNRPEP8-201ENST00000442866 260 ntBASIC2.61□□□□□ -1.99
RHBDL3P58872 AC009237.7-201ENST00000447357 229 ntBASIC2.61□□□□□ -1.99
RHBDL3P58872 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.61□□□□□ -1.99
RHBDL3P58872 PRDX4P1-201ENST00000507189 574 ntBASIC2.61□□□□□ -1.99
RHBDL3P58872 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.61□□□□□ -1.99
RHBDL3P58872 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.61□□□□□ -1.99
RHBDL3P58872 RNU2-34P-201ENST00000516534 121 ntBASIC2.61□□□□□ -1.99
RHBDL3P58872 RNU6-1016P-201ENST00000516689 94 ntBASIC2.61□□□□□ -1.99
RHBDL3P58872 AP005660.1-201ENST00000522972 293 ntBASIC2.61□□□□□ -1.99
RHBDL3P58872 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.61□□□□□ -1.99
RHBDL3P58872 uc_338.5-201ENST00000611839 155 ntBASIC2.61□□□□□ -1.99
RHBDL3P58872 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.61□□□□□ -1.99
RHBDL3P58872 Y_RNA.166-201ENST00000363730 102 ntBASIC2.6□□□□□ -1.99
RHBDL3P58872 DEFA7P-201ENST00000382676 285 ntBASIC2.6□□□□□ -1.99
RHBDL3P58872 MIR32-201ENST00000384965 70 ntBASIC2.6□□□□□ -1.99
RHBDL3P58872 MIR764-201ENST00000390811 85 ntBASIC2.6□□□□□ -1.99
RHBDL3P58872 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
RHBDL3P58872 snoU13.23-201ENST00000458863 104 ntBASIC2.6□□□□□ -1.99
RHBDL3P58872 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.6□□□□□ -1.99
RHBDL3P58872 RNU7-175P-201ENST00000515915 61 ntBASIC2.6□□□□□ -1.99
RHBDL3P58872 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.6□□□□□ -1.99
RHBDL3P58872 AC243960.4-201ENST00000600532 288 ntBASIC2.6□□□□□ -1.99
RHBDL3P58872 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.6□□□□□ -1.99
RHBDL3P58872 AC091932.3-201ENST00000624223 323 ntBASIC2.6□□□□□ -1.99
RHBDL3P58872 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.6□□□□□ -1.99
RHBDL3P58872 RNA5SP493-201ENST00000364115 91 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 Y_RNA.279-201ENST00000364763 95 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 U8.10-201ENST00000384260 133 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 RNU6-541P-201ENST00000384709 110 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 MIR1283-1-201ENST00000408494 87 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 U3.40-201ENST00000408706 208 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 RNU2-2P-201ENST00000410396 191 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 AL356379.1-201ENST00000414105 126 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 RPL21P111-201ENST00000418453 477 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 USMG5P1-201ENST00000425964 177 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.59□□□□□ -1.99
RHBDL3P58872 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.59□□□□□ -1.99
RHBDL3P58872 AL353689.1-201ENST00000438895 199 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.59□□□□□ -1.99
RHBDL3P58872 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.59□□□□□ -1.99
RHBDL3P58872 MIR4769-201ENST00000584126 77 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 AC005786.1-201ENST00000588553 154 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 U2.15-201ENST00000611544 191 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 U2.16-201ENST00000613119 191 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 U2.12-201ENST00000613778 191 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 U2.20-201ENST00000613956 192 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 U2.9-201ENST00000615427 191 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 U2.11-201ENST00000616345 191 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 U2.2-201ENST00000616535 191 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 U2.3-201ENST00000617785 191 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 U2.19-201ENST00000618602 191 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 RNU2-1-201ENST00000618664 191 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 U2.6-201ENST00000619225 191 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 U2.5-201ENST00000619465 191 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 U2.10-201ENST00000620268 191 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 MIR219B-201ENST00000637023 88 ntBASIC2.59□□□□□ -1.99
RHBDL3P58872 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
RHBDL3P58872 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.58□□□□□ -2
RHBDL3P58872 AC009487.4-201ENST00000624969 3585 ntBASIC2.58□□□□□ -2
RHBDL3P58872 MIR6073-201ENST00000352083 89 ntBASIC2.58□□□□□ -2
RHBDL3P58872 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.58□□□□□ -2
RHBDL3P58872 MT-TL1-201ENST00000386347 75 ntBASIC2.58□□□□□ -2
RHBDL3P58872 MIR548F5-201ENST00000408421 86 ntBASIC2.58□□□□□ -2
RHBDL3P58872 SNORA11.4-201ENST00000408823 129 ntBASIC2.58□□□□□ -2
RHBDL3P58872 RPL37P10-201ENST00000412884 288 ntBASIC2.58□□□□□ -2
RHBDL3P58872 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.58□□□□□ -2
RHBDL3P58872 USP9YP30-201ENST00000430729 455 ntBASIC2.58□□□□□ -2
RHBDL3P58872 AL590705.4-201ENST00000532209 134 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 153.5 ms