Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
VSX2P58304 RNU4-20P-201ENST00000365601 151 ntBASIC1.22□□□□□ -2.21
VSX2P58304 RNU6-877P-201ENST00000383868 107 ntBASIC1.22□□□□□ -2.21
VSX2P58304 SNORA29-201ENST00000384183 140 ntBASIC1.22□□□□□ -2.21
VSX2P58304 MIR150-201ENST00000385048 84 ntBASIC1.22□□□□□ -2.21
VSX2P58304 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.22□□□□□ -2.21
VSX2P58304 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.22□□□□□ -2.21
VSX2P58304 AC060773.1-201ENST00000421698 310 ntBASIC1.22□□□□□ -2.21
VSX2P58304 HSPE1P9-201ENST00000440046 311 ntBASIC1.22□□□□□ -2.21
VSX2P58304 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.22□□□□□ -2.21
VSX2P58304 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.22□□□□□ -2.21
VSX2P58304 RNU6-261P-201ENST00000459506 102 ntBASIC1.22□□□□□ -2.21
VSX2P58304 RNU6-1037P-201ENST00000459571 107 ntBASIC1.22□□□□□ -2.21
VSX2P58304 AC087477.1-201ENST00000465747 340 ntBASIC1.22□□□□□ -2.21
VSX2P58304 AC010424.1-201ENST00000506336 297 ntBASIC1.22□□□□□ -2.21
VSX2P58304 AC079140.5-201ENST00000507882 310 ntBASIC1.22□□□□□ -2.21
VSX2P58304 AC025465.4-201ENST00000513422 638 ntBASIC1.22□□□□□ -2.21
VSX2P58304 RNU6-1041P-201ENST00000516254 102 ntBASIC1.22□□□□□ -2.21
VSX2P58304 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.22□□□□□ -2.21
VSX2P58304 AP003034.1-201ENST00000534621 422 ntBASIC1.22□□□□□ -2.21
VSX2P58304 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.22□□□□□ -2.21
VSX2P58304 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.22□□□□□ -2.21
VSX2P58304 MIR3941-201ENST00000582572 103 ntBASIC1.22□□□□□ -2.21
VSX2P58304 AC064807.4-201ENST00000607201 407 ntBASIC1.22□□□□□ -2.21
VSX2P58304 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.22□□□□□ -2.21
VSX2P58304 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.22□□□□□ -2.21
VSX2P58304 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.22□□□□□ -2.21
VSX2P58304 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.22□□□□□ -2.21
VSX2P58304 ELL2P3-201ENST00000457883 1602 ntBASIC1.22□□□□□ -2.21
VSX2P58304 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.21□□□□□ -2.22
VSX2P58304 RNU6-1317P-201ENST00000364582 104 ntBASIC1.21□□□□□ -2.22
VSX2P58304 SNORD26-201ENST00000384147 75 ntBASIC1.21□□□□□ -2.22
VSX2P58304 SNORA40.6-201ENST00000391153 128 ntBASIC1.21□□□□□ -2.22
VSX2P58304 AL117342.1-201ENST00000404861 406 ntBASIC1.21□□□□□ -2.22
VSX2P58304 CDK8P2-201ENST00000415020 547 ntBASIC1.21□□□□□ -2.22
VSX2P58304 MTCO2P16-201ENST00000436962 677 ntBASIC1.21□□□□□ -2.22
VSX2P58304 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.21□□□□□ -2.22
VSX2P58304 AC091133.4-201ENST00000511142 308 ntBASIC1.21□□□□□ -2.22
VSX2P58304 AC092436.3-201ENST00000511788 257 ntBASIC1.21□□□□□ -2.22
VSX2P58304 AC010493.1-201ENST00000513479 292 ntBASIC1.21□□□□□ -2.22
VSX2P58304 SNORA40.12-201ENST00000516329 111 ntBASIC1.21□□□□□ -2.22
VSX2P58304 RNU6-1069P-201ENST00000516612 133 ntBASIC1.21□□□□□ -2.22
VSX2P58304 RNA5SP384-201ENST00000516615 116 ntBASIC1.21□□□□□ -2.22
VSX2P58304 CENPUP1-201ENST00000526649 1202 ntBASIC1.21□□□□□ -2.22
VSX2P58304 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.21□□□□□ -2.22
VSX2P58304 AC084364.2-201ENST00000546924 395 ntBASIC1.21□□□□□ -2.22
VSX2P58304 AC025423.5-201ENST00000550230 219 ntBASIC1.21□□□□□ -2.22
VSX2P58304 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.21□□□□□ -2.22
VSX2P58304 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.21□□□□□ -2.22
VSX2P58304 MIR3660-201ENST00000584845 100 ntBASIC1.21□□□□□ -2.22
VSX2P58304 AC016727.2-201ENST00000603988 621 ntBASIC1.21□□□□□ -2.22
VSX2P58304 RMST_3.1-201ENST00000611651 109 ntBASIC1.21□□□□□ -2.22
VSX2P58304 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.21□□□□□ -2.22
VSX2P58304 AC068792.1-201ENST00000621354 417 ntBASIC1.21□□□□□ -2.22
VSX2P58304 AC022079.1-201ENST00000621546 602 ntBASIC1.21□□□□□ -2.22
VSX2P58304 MIR3974-201ENST00000637126 96 ntBASIC1.21□□□□□ -2.22
VSX2P58304 AC233981.2-201ENST00000611524 1614 ntBASIC1.2□□□□□ -2.22
VSX2P58304 RNU5B-2P-201ENST00000363036 113 ntBASIC1.2□□□□□ -2.22
VSX2P58304 Y_RNA.167-201ENST00000363735 109 ntBASIC1.2□□□□□ -2.22
VSX2P58304 Y_RNA.296-201ENST00000364930 108 ntBASIC1.2□□□□□ -2.22
VSX2P58304 MIR487A-201ENST00000385009 80 ntBASIC1.2□□□□□ -2.22
VSX2P58304 RNU1-78P-201ENST00000391248 165 ntBASIC1.2□□□□□ -2.22
VSX2P58304 AC004866.1-201ENST00000411748 78 ntBASIC1.2□□□□□ -2.22
VSX2P58304 AC090960.1-201ENST00000421072 306 ntBASIC1.2□□□□□ -2.22
VSX2P58304 USP9YP28-201ENST00000435142 589 ntBASIC1.2□□□□□ -2.22
VSX2P58304 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.2□□□□□ -2.22
VSX2P58304 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.2□□□□□ -2.22
VSX2P58304 AC016717.1-201ENST00000448918 286 ntBASIC1.2□□□□□ -2.22
VSX2P58304 SRRM1P2-201ENST00000464531 1192 ntBASIC1.2□□□□□ -2.22
VSX2P58304 RPL26P26-201ENST00000480251 434 ntBASIC1.2□□□□□ -2.22
VSX2P58304 RPL36AP21-201ENST00000490372 323 ntBASIC1.2□□□□□ -2.22
VSX2P58304 HMGN1P7-201ENST00000491722 313 ntBASIC1.2□□□□□ -2.22
VSX2P58304 RN7SKP298-201ENST00000515950 94 ntBASIC1.2□□□□□ -2.22
VSX2P58304 RNU6-189P-201ENST00000516120 101 ntBASIC1.2□□□□□ -2.22
VSX2P58304 SUMO2P18-201ENST00000518873 252 ntBASIC1.2□□□□□ -2.22
VSX2P58304 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.2□□□□□ -2.22
VSX2P58304 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.2□□□□□ -2.22
VSX2P58304 MTND1P15-201ENST00000579262 949 ntBASIC1.2□□□□□ -2.22
VSX2P58304 MIR5692C1-201ENST00000585309 91 ntBASIC1.2□□□□□ -2.22
VSX2P58304 AC092747.3-201ENST00000603769 301 ntBASIC1.2□□□□□ -2.22
VSX2P58304 MIR3976-201ENST00000606807 139 ntBASIC1.2□□□□□ -2.22
VSX2P58304 AC126177.8-201ENST00000618339 1015 ntBASIC1.2□□□□□ -2.22
VSX2P58304 AC103705.1-201ENST00000619013 241 ntBASIC1.2□□□□□ -2.22
VSX2P58304 AC090582.1-201ENST00000636321 199 ntBASIC1.2□□□□□ -2.22
VSX2P58304 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
VSX2P58304 RNU6-227P-201ENST00000362865 103 ntBASIC1.19□□□□□ -2.22
VSX2P58304 SNORD1A-201ENST00000364968 72 ntBASIC1.19□□□□□ -2.22
VSX2P58304 RNU4-66P-201ENST00000365199 138 ntBASIC1.19□□□□□ -2.22
VSX2P58304 RNU6-1329P-201ENST00000365664 107 ntBASIC1.19□□□□□ -2.22
VSX2P58304 RNU4-55P-201ENST00000410731 137 ntBASIC1.19□□□□□ -2.22
VSX2P58304 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.19□□□□□ -2.22
VSX2P58304 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.19□□□□□ -2.22
VSX2P58304 UBE2V1P8-201ENST00000437166 265 ntBASIC1.19□□□□□ -2.22
VSX2P58304 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.19□□□□□ -2.22
VSX2P58304 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.19□□□□□ -2.22
VSX2P58304 AC007395.1-201ENST00000451333 677 ntBASIC1.19□□□□□ -2.22
VSX2P58304 ATP5J2P3-201ENST00000451550 258 ntBASIC1.19□□□□□ -2.22
VSX2P58304 RPL31P3-201ENST00000458430 332 ntBASIC1.19□□□□□ -2.22
VSX2P58304 snoU13.9-201ENST00000458927 103 ntBASIC1.19□□□□□ -2.22
VSX2P58304 HMGB1P29-201ENST00000505659 499 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 182.5 ms