Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC114982.1-201ENST00000469402 321 ntBASIC3.19□□□□□ -1.9
GFRA1P56159 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
GFRA1P56159 MIR449C-201ENST00000516047 92 ntBASIC3.19□□□□□ -1.9
GFRA1P56159 RNU6-436P-201ENST00000516171 114 ntBASIC3.19□□□□□ -1.9
GFRA1P56159 AP005660.1-201ENST00000522972 293 ntBASIC3.19□□□□□ -1.9
GFRA1P56159 MIR4753-201ENST00000585119 83 ntBASIC3.19□□□□□ -1.9
GFRA1P56159 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.19□□□□□ -1.9
GFRA1P56159 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.19□□□□□ -1.9
GFRA1P56159 U7.8-201ENST00000619968 63 ntBASIC3.19□□□□□ -1.9
GFRA1P56159 U6.105-201ENST00000637379 88 ntBASIC3.19□□□□□ -1.9
GFRA1P56159 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
GFRA1P56159 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
GFRA1P56159 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
GFRA1P56159 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
GFRA1P56159 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
GFRA1P56159 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
GFRA1P56159 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
GFRA1P56159 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
GFRA1P56159 RNU6-1020P-201ENST00000363684 107 ntBASIC3.18□□□□□ -1.9
GFRA1P56159 SNORD115-30-201ENST00000364117 82 ntBASIC3.18□□□□□ -1.9
GFRA1P56159 RNU6-234P-201ENST00000365229 104 ntBASIC3.18□□□□□ -1.9
GFRA1P56159 RNU6-1062P-201ENST00000383908 107 ntBASIC3.18□□□□□ -1.9
GFRA1P56159 AL139281.1-201ENST00000422120 335 ntBASIC3.18□□□□□ -1.9
GFRA1P56159 Z82209.1-201ENST00000422141 2135 ntBASIC3.18□□□□□ -1.9
GFRA1P56159 AC006989.1-201ENST00000427212 131 ntBASIC3.18□□□□□ -1.9
GFRA1P56159 RN7SL594P-201ENST00000470590 287 ntBASIC3.18□□□□□ -1.9
GFRA1P56159 HMGN2P9-201ENST00000476875 229 ntBASIC3.18□□□□□ -1.9
GFRA1P56159 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.18□□□□□ -1.9
GFRA1P56159 AC009127.3-201ENST00000570531 403 ntBASIC3.18□□□□□ -1.9
GFRA1P56159 AC010620.2-201ENST00000600135 313 ntBASIC3.18□□□□□ -1.9
GFRA1P56159 U4.6-201ENST00000621618 127 ntBASIC3.18□□□□□ -1.9
GFRA1P56159 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
GFRA1P56159 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
GFRA1P56159 AC110774.1-201ENST00000623567 2018 ntBASIC3.18□□□□□ -1.9
GFRA1P56159 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
GFRA1P56159 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
GFRA1P56159 AC093908.1-201ENST00000623125 8092 ntBASIC3.18□□□□□ -1.9
GFRA1P56159 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
GFRA1P56159 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.18□□□□□ -1.9
GFRA1P56159 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.17□□□□□ -1.9
GFRA1P56159 MFSD8-233ENST00000641482 4860 ntBASIC3.17□□□□□ -1.9
GFRA1P56159 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
GFRA1P56159 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
GFRA1P56159 SNORA63.1-201ENST00000362493 131 ntBASIC3.17□□□□□ -1.9
GFRA1P56159 Y_RNA.150-201ENST00000363562 102 ntBASIC3.17□□□□□ -1.9
GFRA1P56159 AL031003.1-201ENST00000404229 172 ntBASIC3.17□□□□□ -1.9
GFRA1P56159 MIR1283-1-201ENST00000408494 87 ntBASIC3.17□□□□□ -1.9
GFRA1P56159 AL159169.1-201ENST00000421119 127 ntBASIC3.17□□□□□ -1.9
GFRA1P56159 RNU7-120P-201ENST00000459334 63 ntBASIC3.17□□□□□ -1.9
GFRA1P56159 CKS1BP2-201ENST00000497342 240 ntBASIC3.17□□□□□ -1.9
GFRA1P56159 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.17□□□□□ -1.9
GFRA1P56159 AC012314.7-201ENST00000619693 93 ntBASIC3.17□□□□□ -1.9
GFRA1P56159 MIR5739-201ENST00000619803 80 ntBASIC3.17□□□□□ -1.9
GFRA1P56159 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
GFRA1P56159 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
GFRA1P56159 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
GFRA1P56159 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
GFRA1P56159 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
GFRA1P56159 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
GFRA1P56159 RNU6-545P-201ENST00000362681 104 ntBASIC3.16□□□□□ -1.9
GFRA1P56159 RNU6-1272P-201ENST00000362776 107 ntBASIC3.16□□□□□ -1.9
GFRA1P56159 Y_RNA.243-201ENST00000364481 109 ntBASIC3.16□□□□□ -1.9
GFRA1P56159 RNU6-283P-201ENST00000364788 107 ntBASIC3.16□□□□□ -1.9
GFRA1P56159 MIR490-201ENST00000384865 128 ntBASIC3.16□□□□□ -1.9
GFRA1P56159 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.16□□□□□ -1.9
GFRA1P56159 RN7SKP111-201ENST00000410349 271 ntBASIC3.16□□□□□ -1.9
GFRA1P56159 RNU6-710P-201ENST00000410424 105 ntBASIC3.16□□□□□ -1.9
GFRA1P56159 AC104332.1-201ENST00000440471 797 ntBASIC3.16□□□□□ -1.9
GFRA1P56159 SUMO1P2-201ENST00000452524 304 ntBASIC3.16□□□□□ -1.9
GFRA1P56159 RPS29P2-201ENST00000479278 136 ntBASIC3.16□□□□□ -1.9
GFRA1P56159 AC109329.2-201ENST00000519658 482 ntBASIC3.16□□□□□ -1.9
GFRA1P56159 AC018630.3-201ENST00000542637 96 ntBASIC3.16□□□□□ -1.9
GFRA1P56159 MIR3684-201ENST00000579779 74 ntBASIC3.16□□□□□ -1.9
GFRA1P56159 AC023043.3-201ENST00000593113 385 ntBASIC3.16□□□□□ -1.9
GFRA1P56159 AC011921.3-201ENST00000605540 361 ntBASIC3.16□□□□□ -1.9
GFRA1P56159 AC084757.4-201ENST00000616350 526 ntBASIC3.16□□□□□ -1.9
GFRA1P56159 MIR7975-201ENST00000619350 68 ntBASIC3.16□□□□□ -1.9
GFRA1P56159 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.16□□□□□ -1.9
GFRA1P56159 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
GFRA1P56159 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
GFRA1P56159 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
GFRA1P56159 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
GFRA1P56159 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
GFRA1P56159 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.15□□□□□ -1.9
GFRA1P56159 AC080128.1-201ENST00000474389 1917 ntBASIC3.15□□□□□ -1.9
GFRA1P56159 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
GFRA1P56159 RNU4-35P-201ENST00000362588 141 ntBASIC3.15□□□□□ -1.91
GFRA1P56159 RNA5SP50-201ENST00000363731 107 ntBASIC3.15□□□□□ -1.91
GFRA1P56159 Y_RNA.180-201ENST00000363867 113 ntBASIC3.15□□□□□ -1.91
GFRA1P56159 SNORA40.19-201ENST00000390846 128 ntBASIC3.15□□□□□ -1.91
GFRA1P56159 SNORD17-201ENST00000390930 237 ntBASIC3.15□□□□□ -1.91
GFRA1P56159 FO393413.1-201ENST00000402892 195 ntBASIC3.15□□□□□ -1.91
GFRA1P56159 BTF3P11-201ENST00000426582 477 ntBASIC3.15□□□□□ -1.91
GFRA1P56159 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.15□□□□□ -1.91
GFRA1P56159 CYCSP35-201ENST00000451978 304 ntBASIC3.15□□□□□ -1.91
GFRA1P56159 CYP2C59P-201ENST00000457790 269 ntBASIC3.15□□□□□ -1.91
GFRA1P56159 AC080013.2-201ENST00000460866 323 ntBASIC3.15□□□□□ -1.91
GFRA1P56159 AC025518.1-201ENST00000479856 347 ntBASIC3.15□□□□□ -1.91
GFRA1P56159 AC026784.1-201ENST00000507986 352 ntBASIC3.15□□□□□ -1.91
GFRA1P56159 RNU2-27P-201ENST00000516185 142 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms