Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.61□□□□□ -1.99
FOXG1P55316 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
FOXG1P55316 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
FOXG1P55316 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
FOXG1P55316 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.6□□□□□ -1.99
FOXG1P55316 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
FOXG1P55316 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
FOXG1P55316 MIR410-201ENST00000362222 80 ntBASIC2.6□□□□□ -1.99
FOXG1P55316 MIR148B-201ENST00000362252 99 ntBASIC2.6□□□□□ -1.99
FOXG1P55316 RNU6-942P-201ENST00000363002 107 ntBASIC2.6□□□□□ -1.99
FOXG1P55316 RNU6-1175P-201ENST00000365200 107 ntBASIC2.6□□□□□ -1.99
FOXG1P55316 SNORD50.2-201ENST00000365465 70 ntBASIC2.6□□□□□ -1.99
FOXG1P55316 U8.10-201ENST00000384260 133 ntBASIC2.6□□□□□ -1.99
FOXG1P55316 Y_RNA.570-201ENST00000384750 101 ntBASIC2.6□□□□□ -1.99
FOXG1P55316 SNORA46-201ENST00000384762 135 ntBASIC2.6□□□□□ -1.99
FOXG1P55316 MIR329-1-201ENST00000385028 80 ntBASIC2.6□□□□□ -1.99
FOXG1P55316 RNA5SP38-201ENST00000410750 119 ntBASIC2.6□□□□□ -1.99
FOXG1P55316 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.6□□□□□ -1.99
FOXG1P55316 AC022018.1-201ENST00000430685 241 ntBASIC2.6□□□□□ -1.99
FOXG1P55316 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.6□□□□□ -1.99
FOXG1P55316 AC125238.1-201ENST00000448842 249 ntBASIC2.6□□□□□ -1.99
FOXG1P55316 AC006445.2-201ENST00000510061 472 ntBASIC2.6□□□□□ -1.99
FOXG1P55316 AC074133.1-201ENST00000515696 183 ntBASIC2.6□□□□□ -1.99
FOXG1P55316 AC006001.4-201ENST00000622243 395 ntBASIC2.6□□□□□ -1.99
FOXG1P55316 SNORA43.4-201ENST00000629559 138 ntBASIC2.6□□□□□ -1.99
FOXG1P55316 AC010680.1-201ENST00000590024 3590 ntBASIC2.6□□□□□ -1.99
FOXG1P55316 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.6□□□□□ -1.99
FOXG1P55316 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
FOXG1P55316 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
FOXG1P55316 AC000403.1-201ENST00000613696 3585 ntBASIC2.59□□□□□ -1.99
FOXG1P55316 RBBP8P1-201ENST00000449447 1844 ntBASIC2.59□□□□□ -1.99
FOXG1P55316 UBE2WP1-201ENST00000362030 340 ntBASIC2.59□□□□□ -1.99
FOXG1P55316 RNU5B-2P-201ENST00000363036 113 ntBASIC2.59□□□□□ -1.99
FOXG1P55316 SNORD32A-201ENST00000364805 84 ntBASIC2.59□□□□□ -1.99
FOXG1P55316 RNU1-140P-201ENST00000365040 165 ntBASIC2.59□□□□□ -1.99
FOXG1P55316 Y_RNA.319-201ENST00000365138 92 ntBASIC2.59□□□□□ -1.99
FOXG1P55316 RNU6-140P-201ENST00000384566 108 ntBASIC2.59□□□□□ -1.99
FOXG1P55316 RNU6-658P-201ENST00000384606 106 ntBASIC2.59□□□□□ -1.99
FOXG1P55316 MIR518D-201ENST00000385014 87 ntBASIC2.59□□□□□ -1.99
FOXG1P55316 MIR887-201ENST00000401258 79 ntBASIC2.59□□□□□ -1.99
FOXG1P55316 RN7SKP123-201ENST00000410732 291 ntBASIC2.59□□□□□ -1.99
FOXG1P55316 EEF1A1P41-201ENST00000414667 207 ntBASIC2.59□□□□□ -1.99
FOXG1P55316 EIF1AXP1-201ENST00000419267 435 ntBASIC2.59□□□□□ -1.99
FOXG1P55316 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.59□□□□□ -1.99
FOXG1P55316 AC024067.1-201ENST00000426199 223 ntBASIC2.59□□□□□ -1.99
FOXG1P55316 AL139132.1-201ENST00000431587 344 ntBASIC2.59□□□□□ -1.99
FOXG1P55316 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.59□□□□□ -1.99
FOXG1P55316 POLR2KP2-201ENST00000438155 177 ntBASIC2.59□□□□□ -1.99
FOXG1P55316 UQCRBP2-201ENST00000447827 297 ntBASIC2.59□□□□□ -1.99
FOXG1P55316 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
FOXG1P55316 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.59□□□□□ -1.99
FOXG1P55316 AL391261.3-201ENST00000557194 520 ntBASIC2.59□□□□□ -1.99
FOXG1P55316 LINC00933-203ENST00000559812 219 ntBASIC2.59□□□□□ -1.99
FOXG1P55316 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.59□□□□□ -1.99
FOXG1P55316 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
FOXG1P55316 AC006386.2-201ENST00000624491 75 ntBASIC2.59□□□□□ -1.99
FOXG1P55316 AC012005.1-201ENST00000624575 75 ntBASIC2.59□□□□□ -1.99
FOXG1P55316 AL137790.1-201ENST00000634283 177 ntBASIC2.59□□□□□ -1.99
FOXG1P55316 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
FOXG1P55316 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
FOXG1P55316 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
FOXG1P55316 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.59□□□□□ -2
FOXG1P55316 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.58□□□□□ -2
FOXG1P55316 MAPK10-322ENST00000641485 4530 ntBASIC2.58□□□□□ -2
FOXG1P55316 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.58□□□□□ -2
FOXG1P55316 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
FOXG1P55316 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.58□□□□□ -2
FOXG1P55316 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
FOXG1P55316 FTLP6-201ENST00000355274 422 ntBASIC2.58□□□□□ -2
FOXG1P55316 SNORD56.1-201ENST00000362913 68 ntBASIC2.58□□□□□ -2
FOXG1P55316 RNU6-525P-201ENST00000363685 104 ntBASIC2.58□□□□□ -2
FOXG1P55316 Y_RNA.331-201ENST00000365267 102 ntBASIC2.58□□□□□ -2
FOXG1P55316 SNORA18.3-201ENST00000384122 132 ntBASIC2.58□□□□□ -2
FOXG1P55316 SNORA36A-201ENST00000384221 132 ntBASIC2.58□□□□□ -2
FOXG1P55316 RNU6-1145P-201ENST00000384246 107 ntBASIC2.58□□□□□ -2
FOXG1P55316 SNORD116-20-201ENST00000384529 92 ntBASIC2.58□□□□□ -2
FOXG1P55316 RPL23AP36-201ENST00000413895 458 ntBASIC2.58□□□□□ -2
FOXG1P55316 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.58□□□□□ -2
FOXG1P55316 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.58□□□□□ -2
FOXG1P55316 SNORD2.1-201ENST00000458762 69 ntBASIC2.58□□□□□ -2
FOXG1P55316 RN7SL633P-201ENST00000488974 297 ntBASIC2.58□□□□□ -2
FOXG1P55316 SCGB1D5P-201ENST00000515134 247 ntBASIC2.58□□□□□ -2
FOXG1P55316 SNORA40.9-201ENST00000515895 93 ntBASIC2.58□□□□□ -2
FOXG1P55316 RNU6-966P-201ENST00000516479 104 ntBASIC2.58□□□□□ -2
FOXG1P55316 RNU1-103P-201ENST00000516502 125 ntBASIC2.58□□□□□ -2
FOXG1P55316 RNU6-703P-201ENST00000516946 107 ntBASIC2.58□□□□□ -2
FOXG1P55316 RNU6-58P-201ENST00000517143 103 ntBASIC2.58□□□□□ -2
FOXG1P55316 AP004607.1-201ENST00000524456 203 ntBASIC2.58□□□□□ -2
FOXG1P55316 AC007536.1-201ENST00000533382 349 ntBASIC2.58□□□□□ -2
FOXG1P55316 EIF4BP1-201ENST00000554881 351 ntBASIC2.58□□□□□ -2
FOXG1P55316 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.58□□□□□ -2
FOXG1P55316 AC055872.1-201ENST00000570978 278 ntBASIC2.58□□□□□ -2
FOXG1P55316 AL357075.2-201ENST00000614906 189 ntBASIC2.58□□□□□ -2
FOXG1P55316 AC073349.3-201ENST00000617616 186 ntBASIC2.58□□□□□ -2
FOXG1P55316 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.57□□□□□ -2
FOXG1P55316 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.57□□□□□ -2
FOXG1P55316 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.57□□□□□ -2
FOXG1P55316 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.57□□□□□ -2
FOXG1P55316 RNU6-1290P-201ENST00000362957 109 ntBASIC2.57□□□□□ -2
FOXG1P55316 Y_RNA.136-201ENST00000363444 102 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms