Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC016925.1-201ENST00000458303 298 ntBASIC2.05□□□□□ -2.08
CDH13P55290 FO393415.2-201ENST00000480085 343 ntBASIC2.05□□□□□ -2.08
CDH13P55290 AC103851.1-201ENST00000506833 274 ntBASIC2.05□□□□□ -2.08
CDH13P55290 MIR514B-201ENST00000516774 80 ntBASIC2.05□□□□□ -2.08
CDH13P55290 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.05□□□□□ -2.08
CDH13P55290 DEFB131C-201ENST00000528817 165 ntBASIC2.05□□□□□ -2.08
CDH13P55290 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.05□□□□□ -2.08
CDH13P55290 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.05□□□□□ -2.08
CDH13P55290 MIR4801-201ENST00000582704 82 ntBASIC2.05□□□□□ -2.08
CDH13P55290 AC099654.5-201ENST00000636479 350 ntBASIC2.05□□□□□ -2.08
CDH13P55290 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CDH13P55290 Y_RNA.88-201ENST00000363029 99 ntBASIC2.04□□□□□ -2.08
CDH13P55290 RNU6-1059P-201ENST00000363752 98 ntBASIC2.04□□□□□ -2.08
CDH13P55290 SNORD81.2-201ENST00000365153 76 ntBASIC2.04□□□□□ -2.08
CDH13P55290 RNU6-245P-201ENST00000384020 107 ntBASIC2.04□□□□□ -2.08
CDH13P55290 RNU4-52P-201ENST00000384209 138 ntBASIC2.04□□□□□ -2.08
CDH13P55290 RNU6-601P-201ENST00000384540 107 ntBASIC2.04□□□□□ -2.08
CDH13P55290 Y_RNA.533-201ENST00000384596 114 ntBASIC2.04□□□□□ -2.08
CDH13P55290 MIR300-201ENST00000401138 83 ntBASIC2.04□□□□□ -2.08
CDH13P55290 AL355497.1-201ENST00000406262 551 ntBASIC2.04□□□□□ -2.08
CDH13P55290 MIR1283-2-201ENST00000408621 87 ntBASIC2.04□□□□□ -2.08
CDH13P55290 RNU6-1050P-201ENST00000410388 107 ntBASIC2.04□□□□□ -2.08
CDH13P55290 RNU4-53P-201ENST00000410828 140 ntBASIC2.04□□□□□ -2.08
CDH13P55290 RNA5SP450-201ENST00000411206 102 ntBASIC2.04□□□□□ -2.08
CDH13P55290 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.04□□□□□ -2.08
CDH13P55290 RNU1-131P-201ENST00000458943 161 ntBASIC2.04□□□□□ -2.08
CDH13P55290 AC025033.1-201ENST00000463883 194 ntBASIC2.04□□□□□ -2.08
CDH13P55290 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.04□□□□□ -2.08
CDH13P55290 MTND4P12-201ENST00000498999 1377 ntBASIC2.04□□□□□ -2.08
CDH13P55290 HMGN1P12-201ENST00000499125 195 ntBASIC2.04□□□□□ -2.08
CDH13P55290 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.04□□□□□ -2.08
CDH13P55290 RNU1-40P-201ENST00000516816 164 ntBASIC2.04□□□□□ -2.08
CDH13P55290 RNU1-97P-201ENST00000516872 164 ntBASIC2.04□□□□□ -2.08
CDH13P55290 Y_RNA.708-201ENST00000516950 96 ntBASIC2.04□□□□□ -2.08
CDH13P55290 AL590705.4-201ENST00000532209 134 ntBASIC2.04□□□□□ -2.08
CDH13P55290 ANP32BP3-201ENST00000559213 706 ntBASIC2.04□□□□□ -2.08
CDH13P55290 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.04□□□□□ -2.08
CDH13P55290 AC104581.2-201ENST00000572227 430 ntBASIC2.04□□□□□ -2.08
CDH13P55290 SNORD53-201ENST00000579969 78 ntBASIC2.04□□□□□ -2.08
CDH13P55290 MIR4513-201ENST00000581077 86 ntBASIC2.04□□□□□ -2.08
CDH13P55290 AC025754.2-201ENST00000606491 432 ntBASIC2.04□□□□□ -2.08
CDH13P55290 AL355073.2-201ENST00000612106 557 ntBASIC2.04□□□□□ -2.08
CDH13P55290 AC008555.8-201ENST00000623602 2168 ntBASIC2.04□□□□□ -2.08
CDH13P55290 TPTEP1-208ENST00000636884 213 ntBASIC2.04□□□□□ -2.08
CDH13P55290 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.08
CDH13P55290 SNORD115-3-201ENST00000363100 82 ntBASIC2.03□□□□□ -2.08
CDH13P55290 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.03□□□□□ -2.08
CDH13P55290 XGY1-201ENST00000381172 446 ntBASIC2.03□□□□□ -2.08
CDH13P55290 RNU6-17P-201ENST00000384245 107 ntBASIC2.03□□□□□ -2.08
CDH13P55290 RNU6-1026P-201ENST00000384465 108 ntBASIC2.03□□□□□ -2.08
CDH13P55290 RNU6-18P-201ENST00000384527 107 ntBASIC2.03□□□□□ -2.08
CDH13P55290 MIR32-201ENST00000384965 70 ntBASIC2.03□□□□□ -2.08
CDH13P55290 SNORA11.4-201ENST00000408823 129 ntBASIC2.03□□□□□ -2.08
CDH13P55290 Y_RNA.594-201ENST00000410373 140 ntBASIC2.03□□□□□ -2.08
CDH13P55290 Z82188.1-201ENST00000436709 154 ntBASIC2.03□□□□□ -2.08
CDH13P55290 MTND2P29-201ENST00000438595 412 ntBASIC2.03□□□□□ -2.08
CDH13P55290 AC004386.2-201ENST00000441858 148 ntBASIC2.03□□□□□ -2.08
CDH13P55290 AC009237.7-201ENST00000447357 229 ntBASIC2.03□□□□□ -2.08
CDH13P55290 AC007395.1-201ENST00000451333 677 ntBASIC2.03□□□□□ -2.08
CDH13P55290 RPL30P10-201ENST00000488148 337 ntBASIC2.03□□□□□ -2.08
CDH13P55290 RNU7-175P-201ENST00000515915 61 ntBASIC2.03□□□□□ -2.08
CDH13P55290 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.03□□□□□ -2.08
CDH13P55290 AP000889.1-201ENST00000530968 660 ntBASIC2.03□□□□□ -2.08
CDH13P55290 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.03□□□□□ -2.08
CDH13P55290 AP002770.2-201ENST00000543613 532 ntBASIC2.03□□□□□ -2.08
CDH13P55290 SNRPGP18-201ENST00000553000 214 ntBASIC2.03□□□□□ -2.08
CDH13P55290 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.03□□□□□ -2.08
CDH13P55290 AC002984.1-201ENST00000591692 448 ntBASIC2.03□□□□□ -2.08
CDH13P55290 AL158827.2-201ENST00000602494 330 ntBASIC2.03□□□□□ -2.08
CDH13P55290 AC098657.3-201ENST00000620434 263 ntBASIC2.03□□□□□ -2.08
CDH13P55290 AL691447.3-201ENST00000635020 330 ntBASIC2.03□□□□□ -2.08
CDH13P55290 AC009487.4-201ENST00000624969 3585 ntBASIC2.03□□□□□ -2.08
CDH13P55290 LINC02555-201ENST00000563933 1951 ntBASIC2.03□□□□□ -2.08
CDH13P55290 ZNF658B-202ENST00000615961 3375 ntBASIC2.02□□□□□ -2.09
CDH13P55290 SNORA16B-201ENST00000364674 135 ntBASIC2.02□□□□□ -2.09
CDH13P55290 RNA5SP138-201ENST00000365098 114 ntBASIC2.02□□□□□ -2.09
CDH13P55290 BX510359.4-201ENST00000423750 193 ntBASIC2.02□□□□□ -2.09
CDH13P55290 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.02□□□□□ -2.09
CDH13P55290 MIR4435-1-201ENST00000582552 80 ntBASIC2.02□□□□□ -2.09
CDH13P55290 MIR5006-201ENST00000583027 110 ntBASIC2.02□□□□□ -2.09
CDH13P55290 MIR4448-201ENST00000584360 86 ntBASIC2.02□□□□□ -2.09
CDH13P55290 AC130454.1-201ENST00000622948 401 ntBASIC2.02□□□□□ -2.09
CDH13P55290 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
CDH13P55290 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.02□□□□□ -2.09
CDH13P55290 Y_RNA.319-201ENST00000365138 92 ntBASIC2.01□□□□□ -2.09
CDH13P55290 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CDH13P55290 AL023284.1-201ENST00000403956 276 ntBASIC2.01□□□□□ -2.09
CDH13P55290 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CDH13P55290 USMG5P1-201ENST00000425964 177 ntBASIC2.01□□□□□ -2.09
CDH13P55290 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.01□□□□□ -2.09
CDH13P55290 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.01□□□□□ -2.09
CDH13P55290 MTCO3P8-201ENST00000453691 755 ntBASIC2.01□□□□□ -2.09
CDH13P55290 Y_RNA.635-201ENST00000459041 101 ntBASIC2.01□□□□□ -2.09
CDH13P55290 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.01□□□□□ -2.09
CDH13P55290 Y_RNA.670-201ENST00000516255 105 ntBASIC2.01□□□□□ -2.09
CDH13P55290 RNU6-58P-201ENST00000517143 103 ntBASIC2.01□□□□□ -2.09
CDH13P55290 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.01□□□□□ -2.09
CDH13P55290 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.01□□□□□ -2.09
CDH13P55290 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.01□□□□□ -2.09
CDH13P55290 AC005899.2-201ENST00000584353 90 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms