Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 HMGN2P23-201ENST00000456759 269 ntBASIC2.12□□□□□ -2.07
PDX1P52945 SNORA4.4-201ENST00000515921 135 ntBASIC2.12□□□□□ -2.07
PDX1P52945 RNU6-120P-201ENST00000516077 103 ntBASIC2.12□□□□□ -2.07
PDX1P52945 RNU1-104P-201ENST00000517280 175 ntBASIC2.12□□□□□ -2.07
PDX1P52945 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.12□□□□□ -2.07
PDX1P52945 AL117336.2-201ENST00000602435 335 ntBASIC2.12□□□□□ -2.07
PDX1P52945 SNORD14A-201ENST00000606526 91 ntBASIC2.12□□□□□ -2.07
PDX1P52945 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.12□□□□□ -2.07
PDX1P52945 AC022202.1-201ENST00000613515 211 ntBASIC2.12□□□□□ -2.07
PDX1P52945 AL008636.1-201ENST00000625038 1018 ntBASIC2.12□□□□□ -2.07
PDX1P52945 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
PDX1P52945 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
PDX1P52945 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PDX1P52945 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
PDX1P52945 Y_RNA.58-201ENST00000362807 102 ntBASIC2.11□□□□□ -2.07
PDX1P52945 Y_RNA.67-201ENST00000362870 100 ntBASIC2.11□□□□□ -2.07
PDX1P52945 RNU4-73P-201ENST00000363164 141 ntBASIC2.11□□□□□ -2.07
PDX1P52945 Y_RNA.154-201ENST00000363624 102 ntBASIC2.11□□□□□ -2.07
PDX1P52945 U3.9-201ENST00000363823 204 ntBASIC2.11□□□□□ -2.07
PDX1P52945 RNU6-595P-201ENST00000363944 107 ntBASIC2.11□□□□□ -2.07
PDX1P52945 SNORA67.1-201ENST00000364749 141 ntBASIC2.11□□□□□ -2.07
PDX1P52945 RNY3P1-201ENST00000365085 102 ntBASIC2.11□□□□□ -2.07
PDX1P52945 RNY3-201ENST00000365484 102 ntBASIC2.11□□□□□ -2.07
PDX1P52945 RNU6-546P-201ENST00000383991 107 ntBASIC2.11□□□□□ -2.07
PDX1P52945 Y_RNA.490-201ENST00000384413 102 ntBASIC2.11□□□□□ -2.07
PDX1P52945 RNU6-1297P-201ENST00000384415 104 ntBASIC2.11□□□□□ -2.07
PDX1P52945 RNU6-1093P-201ENST00000391194 107 ntBASIC2.11□□□□□ -2.07
PDX1P52945 RPS26P42-201ENST00000413485 326 ntBASIC2.11□□□□□ -2.07
PDX1P52945 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.11□□□□□ -2.07
PDX1P52945 AC009238.1-201ENST00000442165 424 ntBASIC2.11□□□□□ -2.07
PDX1P52945 AC009237.6-201ENST00000446969 424 ntBASIC2.11□□□□□ -2.07
PDX1P52945 OR2AQ1P-201ENST00000451972 200 ntBASIC2.11□□□□□ -2.07
PDX1P52945 MTCO3P10-201ENST00000455912 772 ntBASIC2.11□□□□□ -2.07
PDX1P52945 Y_RNA.632-201ENST00000459189 102 ntBASIC2.11□□□□□ -2.07
PDX1P52945 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.11□□□□□ -2.07
PDX1P52945 HMGB3P3-201ENST00000510526 400 ntBASIC2.11□□□□□ -2.07
PDX1P52945 MTND3P22-201ENST00000510932 243 ntBASIC2.11□□□□□ -2.07
PDX1P52945 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.11□□□□□ -2.07
PDX1P52945 RNU6-667P-201ENST00000517186 102 ntBASIC2.11□□□□□ -2.07
PDX1P52945 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.11□□□□□ -2.07
PDX1P52945 AC022616.8-201ENST00000533569 253 ntBASIC2.11□□□□□ -2.07
PDX1P52945 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.11□□□□□ -2.07
PDX1P52945 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.11□□□□□ -2.07
PDX1P52945 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.11□□□□□ -2.07
PDX1P52945 AC016727.2-201ENST00000603988 621 ntBASIC2.11□□□□□ -2.07
PDX1P52945 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.11□□□□□ -2.07
PDX1P52945 AL132822.1-201ENST00000617063 513 ntBASIC2.11□□□□□ -2.07
PDX1P52945 MIR1248-201ENST00000629190 106 ntBASIC2.11□□□□□ -2.07
PDX1P52945 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
PDX1P52945 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PDX1P52945 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
PDX1P52945 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
PDX1P52945 AL356292.1-201ENST00000283110 373 ntBASIC2.1□□□□□ -2.07
PDX1P52945 SNORA38-201ENST00000363946 132 ntBASIC2.1□□□□□ -2.07
PDX1P52945 RNU4-9P-201ENST00000364951 139 ntBASIC2.1□□□□□ -2.07
PDX1P52945 Y_RNA.387-201ENST00000383918 102 ntBASIC2.1□□□□□ -2.07
PDX1P52945 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.1□□□□□ -2.07
PDX1P52945 TOMM22P6-201ENST00000465035 409 ntBASIC2.1□□□□□ -2.07
PDX1P52945 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.1□□□□□ -2.07
PDX1P52945 SCARNA16.3-201ENST00000516595 184 ntBASIC2.1□□□□□ -2.07
PDX1P52945 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.1□□□□□ -2.07
PDX1P52945 EIF4A1P12-201ENST00000551910 141 ntBASIC2.1□□□□□ -2.07
PDX1P52945 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.1□□□□□ -2.07
PDX1P52945 AC233702.2-202ENST00000562547 291 ntBASIC2.1□□□□□ -2.07
PDX1P52945 PISRT1.1-201ENST00000616930 107 ntBASIC2.1□□□□□ -2.07
PDX1P52945 MIR219B-201ENST00000637023 88 ntBASIC2.1□□□□□ -2.07
PDX1P52945 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PDX1P52945 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
PDX1P52945 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.09□□□□□ -2.07
PDX1P52945 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
PDX1P52945 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
PDX1P52945 RNU6-743P-201ENST00000364151 106 ntBASIC2.09□□□□□ -2.07
PDX1P52945 RNU6-890P-201ENST00000384121 107 ntBASIC2.09□□□□□ -2.07
PDX1P52945 MIR144-201ENST00000384886 86 ntBASIC2.09□□□□□ -2.07
PDX1P52945 MIR32-201ENST00000384965 70 ntBASIC2.09□□□□□ -2.07
PDX1P52945 MIR561-201ENST00000385216 97 ntBASIC2.09□□□□□ -2.07
PDX1P52945 RNY4P36-201ENST00000391116 96 ntBASIC2.09□□□□□ -2.07
PDX1P52945 SNORA11.4-201ENST00000408823 129 ntBASIC2.09□□□□□ -2.07
PDX1P52945 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.09□□□□□ -2.07
PDX1P52945 CBX3P6-201ENST00000430257 527 ntBASIC2.09□□□□□ -2.07
PDX1P52945 AL445305.1-201ENST00000432577 575 ntBASIC2.09□□□□□ -2.07
PDX1P52945 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
PDX1P52945 AC107032.1-201ENST00000485945 480 ntBASIC2.09□□□□□ -2.07
PDX1P52945 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.09□□□□□ -2.07
PDX1P52945 RNA5SP200-201ENST00000516360 103 ntBASIC2.09□□□□□ -2.07
PDX1P52945 RNU6-548P-201ENST00000517083 115 ntBASIC2.09□□□□□ -2.07
PDX1P52945 IGLV3-17-201ENST00000519099 244 ntBASIC2.09□□□□□ -2.07
PDX1P52945 AC034114.1-201ENST00000520293 285 ntBASIC2.09□□□□□ -2.07
PDX1P52945 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.09□□□□□ -2.07
PDX1P52945 AC090517.1-201ENST00000569307 266 ntBASIC2.09□□□□□ -2.07
PDX1P52945 MIR5701-3-201ENST00000578890 82 ntBASIC2.09□□□□□ -2.07
PDX1P52945 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.09□□□□□ -2.07
PDX1P52945 MIR4795-201ENST00000584182 89 ntBASIC2.09□□□□□ -2.07
PDX1P52945 MIR5701-1-201ENST00000585138 82 ntBASIC2.09□□□□□ -2.07
PDX1P52945 MIR5701-2-201ENST00000615634 82 ntBASIC2.09□□□□□ -2.07
PDX1P52945 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.09□□□□□ -2.07
PDX1P52945 AL359697.1-201ENST00000624879 587 ntBASIC2.09□□□□□ -2.07
PDX1P52945 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.09□□□□□ -2.08
PDX1P52945 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.08□□□□□ -2.08
PDX1P52945 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms