Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AC008834.1-201ENST00000511612 175 ntBASIC1.47□□□□□ -2.17
MSH6P52701 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.47□□□□□ -2.17
MSH6P52701 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.47□□□□□ -2.17
MSH6P52701 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.47□□□□□ -2.17
MSH6P52701 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.47□□□□□ -2.17
MSH6P52701 AL160236.1-201ENST00000556317 195 ntBASIC1.47□□□□□ -2.17
MSH6P52701 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.47□□□□□ -2.17
MSH6P52701 AC006362.1-201ENST00000567392 174 ntBASIC1.47□□□□□ -2.17
MSH6P52701 CYP2C61P-201ENST00000604072 290 ntBASIC1.47□□□□□ -2.17
MSH6P52701 AC017083.3-201ENST00000609955 700 ntBASIC1.47□□□□□ -2.17
MSH6P52701 PCGEM1.1-201ENST00000613431 131 ntBASIC1.47□□□□□ -2.17
MSH6P52701 uc_338.34-201ENST00000617467 174 ntBASIC1.47□□□□□ -2.17
MSH6P52701 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
MSH6P52701 Y_RNA.1-201ENST00000352915 104 ntBASIC1.47□□□□□ -2.17
MSH6P52701 RNU6-160P-201ENST00000384591 107 ntBASIC1.47□□□□□ -2.17
MSH6P52701 MIR150-201ENST00000385048 84 ntBASIC1.47□□□□□ -2.17
MSH6P52701 Y_RNA.582-201ENST00000391023 95 ntBASIC1.47□□□□□ -2.17
MSH6P52701 DEFB108C-201ENST00000400154 252 ntBASIC1.47□□□□□ -2.17
MSH6P52701 MIR934-201ENST00000401241 83 ntBASIC1.47□□□□□ -2.17
MSH6P52701 AC009310.1-201ENST00000414414 451 ntBASIC1.47□□□□□ -2.17
MSH6P52701 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
MSH6P52701 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.47□□□□□ -2.17
MSH6P52701 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.47□□□□□ -2.17
MSH6P52701 MTCO2P3-201ENST00000442543 421 ntBASIC1.47□□□□□ -2.17
MSH6P52701 AL035666.1-201ENST00000446195 348 ntBASIC1.47□□□□□ -2.17
MSH6P52701 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.47□□□□□ -2.17
MSH6P52701 AC008628.2-201ENST00000502605 298 ntBASIC1.47□□□□□ -2.17
MSH6P52701 AC016632.1-201ENST00000503994 196 ntBASIC1.47□□□□□ -2.17
MSH6P52701 CCDC34P1-201ENST00000507441 517 ntBASIC1.47□□□□□ -2.17
MSH6P52701 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.47□□□□□ -2.17
MSH6P52701 AC109446.1-201ENST00000566172 220 ntBASIC1.47□□□□□ -2.17
MSH6P52701 MIR3169-201ENST00000578032 83 ntBASIC1.47□□□□□ -2.17
MSH6P52701 MIR4713-201ENST00000582691 75 ntBASIC1.47□□□□□ -2.17
MSH6P52701 AC004223.2-201ENST00000590309 544 ntBASIC1.47□□□□□ -2.17
MSH6P52701 AC078795.3-201ENST00000602913 472 ntBASIC1.47□□□□□ -2.17
MSH6P52701 AC012507.3-201ENST00000603556 477 ntBASIC1.47□□□□□ -2.17
MSH6P52701 AC010900.2-201ENST00000604508 210 ntBASIC1.47□□□□□ -2.17
MSH6P52701 AL050343.2-201ENST00000607338 280 ntBASIC1.47□□□□□ -2.17
MSH6P52701 AC022079.1-201ENST00000621546 602 ntBASIC1.47□□□□□ -2.17
MSH6P52701 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
MSH6P52701 AC090582.1-201ENST00000636321 199 ntBASIC1.47□□□□□ -2.17
MSH6P52701 RNU4-56P-201ENST00000364700 142 ntBASIC1.46□□□□□ -2.18
MSH6P52701 Y_RNA.296-201ENST00000364930 108 ntBASIC1.46□□□□□ -2.18
MSH6P52701 Y_RNA.359-201ENST00000365498 102 ntBASIC1.46□□□□□ -2.18
MSH6P52701 RNY3P9-201ENST00000384727 106 ntBASIC1.46□□□□□ -2.18
MSH6P52701 SNORA48.1-201ENST00000390879 135 ntBASIC1.46□□□□□ -2.18
MSH6P52701 RNU6-955P-201ENST00000410497 104 ntBASIC1.46□□□□□ -2.18
MSH6P52701 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.46□□□□□ -2.18
MSH6P52701 AL606489.2-201ENST00000433886 234 ntBASIC1.46□□□□□ -2.18
MSH6P52701 AC091874.1-201ENST00000511402 339 ntBASIC1.46□□□□□ -2.18
MSH6P52701 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.46□□□□□ -2.18
MSH6P52701 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
MSH6P52701 Y_RNA.251-201ENST00000364551 99 ntBASIC1.45□□□□□ -2.18
MSH6P52701 Y_RNA.381-201ENST00000365666 102 ntBASIC1.45□□□□□ -2.18
MSH6P52701 MIR532-201ENST00000385025 91 ntBASIC1.45□□□□□ -2.18
MSH6P52701 AL606923.1-201ENST00000406616 190 ntBASIC1.45□□□□□ -2.18
MSH6P52701 MIR1285-1-201ENST00000408593 84 ntBASIC1.45□□□□□ -2.18
MSH6P52701 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.45□□□□□ -2.18
MSH6P52701 AC123900.1-201ENST00000420390 96 ntBASIC1.45□□□□□ -2.18
MSH6P52701 AL591704.2-201ENST00000421658 181 ntBASIC1.45□□□□□ -2.18
MSH6P52701 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.45□□□□□ -2.18
MSH6P52701 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.45□□□□□ -2.18
MSH6P52701 MTCO2P16-201ENST00000436962 677 ntBASIC1.45□□□□□ -2.18
MSH6P52701 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.45□□□□□ -2.18
MSH6P52701 RNU7-138P-201ENST00000459479 64 ntBASIC1.45□□□□□ -2.18
MSH6P52701 AC007547.1-201ENST00000462177 490 ntBASIC1.45□□□□□ -2.18
MSH6P52701 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.45□□□□□ -2.18
MSH6P52701 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.45□□□□□ -2.18
MSH6P52701 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.45□□□□□ -2.18
MSH6P52701 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.45□□□□□ -2.18
MSH6P52701 SNORA14.1-201ENST00000516113 141 ntBASIC1.45□□□□□ -2.18
MSH6P52701 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.45□□□□□ -2.18
MSH6P52701 AP003034.1-201ENST00000534621 422 ntBASIC1.45□□□□□ -2.18
MSH6P52701 EIF4A1P12-201ENST00000551910 141 ntBASIC1.45□□□□□ -2.18
MSH6P52701 MIR1273G-201ENST00000577677 100 ntBASIC1.45□□□□□ -2.18
MSH6P52701 MIR3973-201ENST00000579824 107 ntBASIC1.45□□□□□ -2.18
MSH6P52701 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.45□□□□□ -2.18
MSH6P52701 RN7SKP299-201ENST00000606679 301 ntBASIC1.45□□□□□ -2.18
MSH6P52701 AC103810.8-201ENST00000607347 118 ntBASIC1.45□□□□□ -2.18
MSH6P52701 MIR6857-201ENST00000613267 93 ntBASIC1.45□□□□□ -2.18
MSH6P52701 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
MSH6P52701 CBX3P1-201ENST00000325243 554 ntBASIC1.44□□□□□ -2.18
MSH6P52701 U3.9-201ENST00000363823 204 ntBASIC1.44□□□□□ -2.18
MSH6P52701 RNU6-82P-201ENST00000363970 107 ntBASIC1.44□□□□□ -2.18
MSH6P52701 SNORD116-9-201ENST00000384000 95 ntBASIC1.44□□□□□ -2.18
MSH6P52701 SNORD116-3-201ENST00000384287 95 ntBASIC1.44□□□□□ -2.18
MSH6P52701 RNU6-378P-201ENST00000384324 107 ntBASIC1.44□□□□□ -2.18
MSH6P52701 SNORD116-7-201ENST00000384404 95 ntBASIC1.44□□□□□ -2.18
MSH6P52701 SNORD116-5-201ENST00000384462 95 ntBASIC1.44□□□□□ -2.18
MSH6P52701 MTATP6P17-201ENST00000431030 672 ntBASIC1.44□□□□□ -2.18
MSH6P52701 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.44□□□□□ -2.18
MSH6P52701 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.44□□□□□ -2.18
MSH6P52701 RNU1-131P-201ENST00000458943 161 ntBASIC1.44□□□□□ -2.18
MSH6P52701 MTCO3P38-201ENST00000468910 766 ntBASIC1.44□□□□□ -2.18
MSH6P52701 RNVU1-2-201ENST00000516326 135 ntBASIC1.44□□□□□ -2.18
MSH6P52701 SNORA40.12-201ENST00000516329 111 ntBASIC1.44□□□□□ -2.18
MSH6P52701 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.44□□□□□ -2.18
MSH6P52701 CYP4A27P-201ENST00000567218 190 ntBASIC1.44□□□□□ -2.18
MSH6P52701 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.44□□□□□ -2.18
MSH6P52701 AC010620.1-201ENST00000601088 1102 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms