Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 RNU6-877P-201ENST00000383868 107 ntBASIC1.74□□□□□ -2.13
GPC3P51654 RNU6-780P-201ENST00000391030 104 ntBASIC1.74□□□□□ -2.13
GPC3P51654 MTCYBP2-201ENST00000407745 171 ntBASIC1.74□□□□□ -2.13
GPC3P51654 AP1B1P2-201ENST00000416196 106 ntBASIC1.74□□□□□ -2.13
GPC3P51654 AC009161.1-201ENST00000417306 376 ntBASIC1.74□□□□□ -2.13
GPC3P51654 ZNF885P-201ENST00000420174 1098 ntBASIC1.74□□□□□ -2.13
GPC3P51654 AC123900.1-201ENST00000420390 96 ntBASIC1.74□□□□□ -2.13
GPC3P51654 MRPS10P2-201ENST00000431226 381 ntBASIC1.74□□□□□ -2.13
GPC3P51654 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.74□□□□□ -2.13
GPC3P51654 RNU6-612P-201ENST00000516909 102 ntBASIC1.74□□□□□ -2.13
GPC3P51654 AP005597.4-201ENST00000526762 229 ntBASIC1.74□□□□□ -2.13
GPC3P51654 AC087441.2-201ENST00000529141 262 ntBASIC1.74□□□□□ -2.13
GPC3P51654 SCOCP1-201ENST00000554676 349 ntBASIC1.74□□□□□ -2.13
GPC3P51654 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.74□□□□□ -2.13
GPC3P51654 SNORD53B-201ENST00000577887 78 ntBASIC1.74□□□□□ -2.13
GPC3P51654 snoU13.31-201ENST00000607291 104 ntBASIC1.74□□□□□ -2.13
GPC3P51654 AC068944.2-201ENST00000610373 403 ntBASIC1.74□□□□□ -2.13
GPC3P51654 AL121757.2-201ENST00000611223 313 ntBASIC1.74□□□□□ -2.13
GPC3P51654 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.74□□□□□ -2.13
GPC3P51654 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.74□□□□□ -2.13
GPC3P51654 MIR126-201ENST00000362291 85 ntBASIC1.73□□□□□ -2.13
GPC3P51654 U3.9-201ENST00000363823 204 ntBASIC1.73□□□□□ -2.13
GPC3P51654 RNU6-60P-201ENST00000364792 103 ntBASIC1.73□□□□□ -2.13
GPC3P51654 Y_RNA.450-201ENST00000384198 113 ntBASIC1.73□□□□□ -2.13
GPC3P51654 RNU6-933P-201ENST00000384424 107 ntBASIC1.73□□□□□ -2.13
GPC3P51654 SNORD73A-201ENST00000386062 65 ntBASIC1.73□□□□□ -2.13
GPC3P51654 MIR450B-201ENST00000401182 78 ntBASIC1.73□□□□□ -2.13
GPC3P51654 RPL23AP36-201ENST00000413895 458 ntBASIC1.73□□□□□ -2.13
GPC3P51654 RPL9P9-202ENST00000466501 579 ntBASIC1.73□□□□□ -2.13
GPC3P51654 MTCO1P29-201ENST00000496868 288 ntBASIC1.73□□□□□ -2.13
GPC3P51654 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.73□□□□□ -2.13
GPC3P51654 MTND1P35-201ENST00000526739 508 ntBASIC1.73□□□□□ -2.13
GPC3P51654 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.73□□□□□ -2.13
GPC3P51654 AC026371.1-201ENST00000551867 419 ntBASIC1.73□□□□□ -2.13
GPC3P51654 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.73□□□□□ -2.13
GPC3P51654 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.73□□□□□ -2.13
GPC3P51654 CYP4A27P-201ENST00000567218 190 ntBASIC1.73□□□□□ -2.13
GPC3P51654 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.73□□□□□ -2.13
GPC3P51654 BX248123.2-201ENST00000606318 124 ntBASIC1.73□□□□□ -2.13
GPC3P51654 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.73□□□□□ -2.13
GPC3P51654 MIR8074-201ENST00000615081 81 ntBASIC1.73□□□□□ -2.13
GPC3P51654 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.73□□□□□ -2.13
GPC3P51654 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.73□□□□□ -2.13
GPC3P51654 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
GPC3P51654 AC009541.1-201ENST00000438279 2662 ntBASIC1.73□□□□□ -2.13
GPC3P51654 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.72□□□□□ -2.13
GPC3P51654 MIR424-201ENST00000362227 98 ntBASIC1.72□□□□□ -2.13
GPC3P51654 Y_RNA.167-201ENST00000363735 109 ntBASIC1.72□□□□□ -2.13
GPC3P51654 RNU1-42P-201ENST00000364033 160 ntBASIC1.72□□□□□ -2.13
GPC3P51654 Y_RNA.256-201ENST00000364594 104 ntBASIC1.72□□□□□ -2.13
GPC3P51654 RNU4-12P-201ENST00000365233 139 ntBASIC1.72□□□□□ -2.13
GPC3P51654 Y_RNA.373-201ENST00000365600 103 ntBASIC1.72□□□□□ -2.13
GPC3P51654 Y_RNA.504-201ENST00000384481 104 ntBASIC1.72□□□□□ -2.13
GPC3P51654 RNU6-997P-201ENST00000384725 107 ntBASIC1.72□□□□□ -2.13
GPC3P51654 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
GPC3P51654 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
GPC3P51654 AL589823.1-201ENST00000429577 183 ntBASIC1.72□□□□□ -2.13
GPC3P51654 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.72□□□□□ -2.13
GPC3P51654 AMD1P1-201ENST00000457220 922 ntBASIC1.72□□□□□ -2.13
GPC3P51654 AC007547.1-201ENST00000462177 490 ntBASIC1.72□□□□□ -2.13
GPC3P51654 AC130509.1-201ENST00000464158 433 ntBASIC1.72□□□□□ -2.13
GPC3P51654 AC025465.3-201ENST00000510570 311 ntBASIC1.72□□□□□ -2.13
GPC3P51654 AC025465.4-201ENST00000513422 638 ntBASIC1.72□□□□□ -2.13
GPC3P51654 RNU6-970P-201ENST00000516312 107 ntBASIC1.72□□□□□ -2.13
GPC3P51654 SNORA31.16-201ENST00000516773 139 ntBASIC1.72□□□□□ -2.13
GPC3P51654 SUMO2P18-201ENST00000518873 252 ntBASIC1.72□□□□□ -2.13
GPC3P51654 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.72□□□□□ -2.13
GPC3P51654 AC016925.2-201ENST00000605108 242 ntBASIC1.72□□□□□ -2.13
GPC3P51654 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
GPC3P51654 Y_RNA.38-201ENST00000362617 102 ntBASIC1.71□□□□□ -2.14
GPC3P51654 RNU6-254P-201ENST00000363377 107 ntBASIC1.71□□□□□ -2.14
GPC3P51654 Y_RNA.157-201ENST00000363638 102 ntBASIC1.71□□□□□ -2.14
GPC3P51654 SNORD114-6-201ENST00000364393 72 ntBASIC1.71□□□□□ -2.14
GPC3P51654 FGF7P8-201ENST00000402994 292 ntBASIC1.71□□□□□ -2.14
GPC3P51654 MIR1323-201ENST00000408090 73 ntBASIC1.71□□□□□ -2.14
GPC3P51654 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.71□□□□□ -2.14
GPC3P51654 Z82205.1-201ENST00000428456 297 ntBASIC1.71□□□□□ -2.14
GPC3P51654 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.71□□□□□ -2.14
GPC3P51654 RNU7-95P-201ENST00000459222 64 ntBASIC1.71□□□□□ -2.14
GPC3P51654 HMGN2P26-201ENST00000463169 339 ntBASIC1.71□□□□□ -2.14
GPC3P51654 AC083904.1-201ENST00000487828 231 ntBASIC1.71□□□□□ -2.14
GPC3P51654 HMGN1P13-201ENST00000505795 138 ntBASIC1.71□□□□□ -2.14
GPC3P51654 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.71□□□□□ -2.14
GPC3P51654 AC108729.3-201ENST00000513484 108 ntBASIC1.71□□□□□ -2.14
GPC3P51654 Y_RNA.665-201ENST00000516177 98 ntBASIC1.71□□□□□ -2.14
GPC3P51654 DNAJC19P9-201ENST00000555084 351 ntBASIC1.71□□□□□ -2.14
GPC3P51654 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.71□□□□□ -2.14
GPC3P51654 AC064836.2-201ENST00000609491 462 ntBASIC1.71□□□□□ -2.14
GPC3P51654 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.71□□□□□ -2.14
GPC3P51654 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
GPC3P51654 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
GPC3P51654 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
GPC3P51654 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
GPC3P51654 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.7□□□□□ -2.14
GPC3P51654 Y_RNA.453-201ENST00000384223 109 ntBASIC1.7□□□□□ -2.14
GPC3P51654 Y_RNA.516-201ENST00000384541 124 ntBASIC1.7□□□□□ -2.14
GPC3P51654 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.7□□□□□ -2.14
GPC3P51654 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.7□□□□□ -2.14
GPC3P51654 AC092436.3-201ENST00000511788 257 ntBASIC1.7□□□□□ -2.14
GPC3P51654 RNU6-1332P-201ENST00000516666 104 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms