Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC073325.2-201ENST00000339545 159 ntBASIC3.39□□□□□ -1.87
MRE11P49959 Y_RNA.16-201ENST00000362421 102 ntBASIC3.39□□□□□ -1.87
MRE11P49959 RNU5B-2P-201ENST00000363036 113 ntBASIC3.39□□□□□ -1.87
MRE11P49959 Y_RNA.352-201ENST00000365439 102 ntBASIC3.39□□□□□ -1.87
MRE11P49959 RNU6-318P-201ENST00000384283 103 ntBASIC3.39□□□□□ -1.87
MRE11P49959 Y_RNA.541-201ENST00000384640 113 ntBASIC3.39□□□□□ -1.87
MRE11P49959 RNU1-139P-201ENST00000391307 165 ntBASIC3.39□□□□□ -1.87
MRE11P49959 RNU2-14P-201ENST00000411053 191 ntBASIC3.39□□□□□ -1.87
MRE11P49959 AP000870.1-201ENST00000472927 406 ntBASIC3.39□□□□□ -1.87
MRE11P49959 AC090525.1-201ENST00000479116 478 ntBASIC3.39□□□□□ -1.87
MRE11P49959 AC108210.2-201ENST00000503681 201 ntBASIC3.39□□□□□ -1.87
MRE11P49959 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.39□□□□□ -1.87
MRE11P49959 AC006445.2-201ENST00000510061 472 ntBASIC3.39□□□□□ -1.87
MRE11P49959 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.39□□□□□ -1.87
MRE11P49959 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.39□□□□□ -1.87
MRE11P49959 DEFB122-202ENST00000569013 197 ntBASIC3.39□□□□□ -1.87
MRE11P49959 AC007318.2-201ENST00000620999 243 ntBASIC3.39□□□□□ -1.87
MRE11P49959 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.39□□□□□ -1.87
MRE11P49959 AL450472.1-202ENST00000637286 180 ntBASIC3.39□□□□□ -1.87
MRE11P49959 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
MRE11P49959 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
MRE11P49959 AC009487.2-201ENST00000420969 6821 ntBASIC3.38□□□□□ -1.87
MRE11P49959 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
MRE11P49959 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.38□□□□□ -1.87
MRE11P49959 Y_RNA.4-201ENST00000362333 112 ntBASIC3.38□□□□□ -1.87
MRE11P49959 RNU6-858P-201ENST00000362436 107 ntBASIC3.38□□□□□ -1.87
MRE11P49959 SNORA25.6-201ENST00000364121 118 ntBASIC3.38□□□□□ -1.87
MRE11P49959 RNU6-142P-201ENST00000384019 107 ntBASIC3.38□□□□□ -1.87
MRE11P49959 RNU6-937P-201ENST00000384325 106 ntBASIC3.38□□□□□ -1.87
MRE11P49959 RNU6-843P-201ENST00000384454 104 ntBASIC3.38□□□□□ -1.87
MRE11P49959 SNORD58.1-201ENST00000391313 66 ntBASIC3.38□□□□□ -1.87
MRE11P49959 AL603910.2-201ENST00000407268 136 ntBASIC3.38□□□□□ -1.87
MRE11P49959 AC099548.1-201ENST00000421443 426 ntBASIC3.38□□□□□ -1.87
MRE11P49959 MTND5P15-201ENST00000434246 349 ntBASIC3.38□□□□□ -1.87
MRE11P49959 SUMO1P2-201ENST00000452524 304 ntBASIC3.38□□□□□ -1.87
MRE11P49959 AL139109.1-201ENST00000455491 297 ntBASIC3.38□□□□□ -1.87
MRE11P49959 RPL26P9-201ENST00000457466 433 ntBASIC3.38□□□□□ -1.87
MRE11P49959 AL031183.1-201ENST00000457667 207 ntBASIC3.38□□□□□ -1.87
MRE11P49959 RNA5SP445-201ENST00000515889 115 ntBASIC3.38□□□□□ -1.87
MRE11P49959 RNU6-1114P-201ENST00000516022 107 ntBASIC3.38□□□□□ -1.87
MRE11P49959 RNU5B-3P-201ENST00000516601 115 ntBASIC3.38□□□□□ -1.87
MRE11P49959 SNORA31.23-201ENST00000517219 133 ntBASIC3.38□□□□□ -1.87
MRE11P49959 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.38□□□□□ -1.87
MRE11P49959 AC016256.1-201ENST00000547971 354 ntBASIC3.38□□□□□ -1.87
MRE11P49959 AC025754.2-201ENST00000606491 432 ntBASIC3.38□□□□□ -1.87
MRE11P49959 AL365434.2-201ENST00000607979 234 ntBASIC3.38□□□□□ -1.87
MRE11P49959 AL590808.1-201ENST00000618696 141 ntBASIC3.38□□□□□ -1.87
MRE11P49959 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.38□□□□□ -1.87
MRE11P49959 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
MRE11P49959 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
MRE11P49959 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
MRE11P49959 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
MRE11P49959 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.37□□□□□ -1.87
MRE11P49959 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.37□□□□□ -1.87
MRE11P49959 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
MRE11P49959 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
MRE11P49959 Y_RNA.117-201ENST00000363294 101 ntBASIC3.37□□□□□ -1.87
MRE11P49959 SNORD113-8-201ENST00000363497 74 ntBASIC3.37□□□□□ -1.87
MRE11P49959 RNU6-879P-201ENST00000364328 108 ntBASIC3.37□□□□□ -1.87
MRE11P49959 RNU6-1280P-201ENST00000365211 107 ntBASIC3.37□□□□□ -1.87
MRE11P49959 MIR592-201ENST00000384959 97 ntBASIC3.37□□□□□ -1.87
MRE11P49959 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.37□□□□□ -1.87
MRE11P49959 Y_RNA.602-201ENST00000410535 92 ntBASIC3.37□□□□□ -1.87
MRE11P49959 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.37□□□□□ -1.87
MRE11P49959 RPS15AP7-201ENST00000439294 405 ntBASIC3.37□□□□□ -1.87
MRE11P49959 HMGN2P10-201ENST00000448085 265 ntBASIC3.37□□□□□ -1.87
MRE11P49959 RPS29P12-201ENST00000460178 152 ntBASIC3.37□□□□□ -1.87
MRE11P49959 AC008413.1-201ENST00000511864 177 ntBASIC3.37□□□□□ -1.87
MRE11P49959 RNU6-581P-201ENST00000516214 105 ntBASIC3.37□□□□□ -1.87
MRE11P49959 NACAP3-201ENST00000552100 481 ntBASIC3.37□□□□□ -1.87
MRE11P49959 AC027288.2-201ENST00000553028 243 ntBASIC3.37□□□□□ -1.87
MRE11P49959 MIR5571-201ENST00000577998 113 ntBASIC3.37□□□□□ -1.87
MRE11P49959 AC098479.1-201ENST00000609225 154 ntBASIC3.37□□□□□ -1.87
MRE11P49959 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
MRE11P49959 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
MRE11P49959 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
MRE11P49959 Y_RNA.54-201ENST00000362766 105 ntBASIC3.36□□□□□ -1.87
MRE11P49959 RNY1-201ENST00000364228 113 ntBASIC3.36□□□□□ -1.87
MRE11P49959 RNU6-926P-201ENST00000384075 107 ntBASIC3.36□□□□□ -1.87
MRE11P49959 U8.10-201ENST00000384260 133 ntBASIC3.36□□□□□ -1.87
MRE11P49959 Y_RNA.785-201ENST00000384290 109 ntBASIC3.36□□□□□ -1.87
MRE11P49959 Y_RNA.504-201ENST00000384481 104 ntBASIC3.36□□□□□ -1.87
MRE11P49959 MIR544A-201ENST00000384855 91 ntBASIC3.36□□□□□ -1.87
MRE11P49959 BPY2DP-201ENST00000422208 265 ntBASIC3.36□□□□□ -1.87
MRE11P49959 AC104332.2-201ENST00000429959 156 ntBASIC3.36□□□□□ -1.87
MRE11P49959 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.36□□□□□ -1.87
MRE11P49959 AC108938.1-201ENST00000451204 136 ntBASIC3.36□□□□□ -1.87
MRE11P49959 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.36□□□□□ -1.87
MRE11P49959 MED28P2-201ENST00000475771 317 ntBASIC3.36□□□□□ -1.87
MRE11P49959 GZMAP1-201ENST00000503054 631 ntBASIC3.36□□□□□ -1.87
MRE11P49959 RNU6-496P-201ENST00000516145 99 ntBASIC3.36□□□□□ -1.87
MRE11P49959 AL391261.3-201ENST00000557194 520 ntBASIC3.36□□□□□ -1.87
MRE11P49959 AL356575.1-201ENST00000603008 283 ntBASIC3.36□□□□□ -1.87
MRE11P49959 HSPE1P7-201ENST00000604681 321 ntBASIC3.36□□□□□ -1.87
MRE11P49959 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
MRE11P49959 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
MRE11P49959 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.35□□□□□ -1.87
MRE11P49959 AC062016.1-201ENST00000355719 319 ntBASIC3.35□□□□□ -1.87
MRE11P49959 RNA5SP361-201ENST00000362686 118 ntBASIC3.35□□□□□ -1.87
MRE11P49959 Y_RNA.269-201ENST00000364685 89 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms