Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 AP001485.1-201ENST00000604799 199 ntBASIC2.97□□□□□ -1.93
CLK3P49761 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.97□□□□□ -1.93
CLK3P49761 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.97□□□□□ -1.93
CLK3P49761 AC024581.2-201ENST00000619986 252 ntBASIC2.97□□□□□ -1.93
CLK3P49761 MIR6733-201ENST00000635723 61 ntBASIC2.97□□□□□ -1.93
CLK3P49761 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLK3P49761 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.97□□□□□ -1.93
CLK3P49761 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
CLK3P49761 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CLK3P49761 SNORA38.1-201ENST00000364172 131 ntBASIC2.96□□□□□ -1.94
CLK3P49761 SNORD32A-201ENST00000364805 84 ntBASIC2.96□□□□□ -1.94
CLK3P49761 Y_RNA.304-201ENST00000365011 112 ntBASIC2.96□□□□□ -1.94
CLK3P49761 RNU6-1280P-201ENST00000365211 107 ntBASIC2.96□□□□□ -1.94
CLK3P49761 Y_RNA.418-201ENST00000384029 102 ntBASIC2.96□□□□□ -1.94
CLK3P49761 RNU6-20P-201ENST00000384106 107 ntBASIC2.96□□□□□ -1.94
CLK3P49761 Y_RNA.446-201ENST00000384178 104 ntBASIC2.96□□□□□ -1.94
CLK3P49761 RNU6-1145P-201ENST00000384246 107 ntBASIC2.96□□□□□ -1.94
CLK3P49761 RNU6-159P-201ENST00000391080 106 ntBASIC2.96□□□□□ -1.94
CLK3P49761 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.96□□□□□ -1.94
CLK3P49761 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.96□□□□□ -1.94
CLK3P49761 AP001025.1-201ENST00000486139 332 ntBASIC2.96□□□□□ -1.94
CLK3P49761 RPS27P26-201ENST00000494583 239 ntBASIC2.96□□□□□ -1.94
CLK3P49761 AC091874.1-201ENST00000511402 339 ntBASIC2.96□□□□□ -1.94
CLK3P49761 RNU6-581P-201ENST00000516214 105 ntBASIC2.96□□□□□ -1.94
CLK3P49761 RNU6-346P-201ENST00000516288 111 ntBASIC2.96□□□□□ -1.94
CLK3P49761 RNU6-1198P-201ENST00000516904 67 ntBASIC2.96□□□□□ -1.94
CLK3P49761 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.96□□□□□ -1.94
CLK3P49761 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.96□□□□□ -1.94
CLK3P49761 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.96□□□□□ -1.94
CLK3P49761 AC008749.1-201ENST00000597650 306 ntBASIC2.96□□□□□ -1.94
CLK3P49761 AC069200.1-201ENST00000609511 323 ntBASIC2.96□□□□□ -1.94
CLK3P49761 AC073349.3-201ENST00000617616 186 ntBASIC2.96□□□□□ -1.94
CLK3P49761 AC110079.1-202ENST00000635213 138 ntBASIC2.96□□□□□ -1.94
CLK3P49761 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CLK3P49761 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.96□□□□□ -1.94
CLK3P49761 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CLK3P49761 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.96□□□□□ -1.94
CLK3P49761 AC091564.4-201ENST00000533934 2194 ntBASIC2.95□□□□□ -1.94
CLK3P49761 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.95□□□□□ -1.94
CLK3P49761 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.95□□□□□ -1.94
CLK3P49761 SNORA63.1-201ENST00000362493 131 ntBASIC2.95□□□□□ -1.94
CLK3P49761 RNU6-1175P-201ENST00000365200 107 ntBASIC2.95□□□□□ -1.94
CLK3P49761 U8.10-201ENST00000384260 133 ntBASIC2.95□□□□□ -1.94
CLK3P49761 RNU6-804P-201ENST00000384286 107 ntBASIC2.95□□□□□ -1.94
CLK3P49761 RNU6-1289P-201ENST00000384431 106 ntBASIC2.95□□□□□ -1.94
CLK3P49761 MIR329-1-201ENST00000385028 80 ntBASIC2.95□□□□□ -1.94
CLK3P49761 AL357075.1-201ENST00000404107 726 ntBASIC2.95□□□□□ -1.94
CLK3P49761 RNA5SP120-201ENST00000410900 112 ntBASIC2.95□□□□□ -1.94
CLK3P49761 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.95□□□□□ -1.94
CLK3P49761 WARS2P1-201ENST00000429678 537 ntBASIC2.95□□□□□ -1.94
CLK3P49761 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.95□□□□□ -1.94
CLK3P49761 AL161651.1-201ENST00000440882 223 ntBASIC2.95□□□□□ -1.94
CLK3P49761 RPS12P18-201ENST00000442381 270 ntBASIC2.95□□□□□ -1.94
CLK3P49761 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.95□□□□□ -1.94
CLK3P49761 AC008155.2-201ENST00000464337 397 ntBASIC2.95□□□□□ -1.94
CLK3P49761 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLK3P49761 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.95□□□□□ -1.94
CLK3P49761 MIR5695-201ENST00000579717 85 ntBASIC2.95□□□□□ -1.94
CLK3P49761 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.95□□□□□ -1.94
CLK3P49761 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.95□□□□□ -1.94
CLK3P49761 AL138963.2-201ENST00000605137 226 ntBASIC2.95□□□□□ -1.94
CLK3P49761 IGHVIII-44-202ENST00000636235 289 ntBASIC2.95□□□□□ -1.94
CLK3P49761 AC009487.2-201ENST00000420969 6821 ntBASIC2.95□□□□□ -1.94
CLK3P49761 AC004944.1-201ENST00000517807 3059 ntBASIC2.95□□□□□ -1.94
CLK3P49761 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CLK3P49761 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.94□□□□□ -1.94
CLK3P49761 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.94□□□□□ -1.94
CLK3P49761 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLK3P49761 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLK3P49761 SNORD115-8-201ENST00000363856 82 ntBASIC2.94□□□□□ -1.94
CLK3P49761 SNORD115-38-201ENST00000365037 82 ntBASIC2.94□□□□□ -1.94
CLK3P49761 RNU6-750P-201ENST00000390946 107 ntBASIC2.94□□□□□ -1.94
CLK3P49761 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.94□□□□□ -1.94
CLK3P49761 RNU6-1001P-201ENST00000411265 100 ntBASIC2.94□□□□□ -1.94
CLK3P49761 RPL23AP36-201ENST00000413895 458 ntBASIC2.94□□□□□ -1.94
CLK3P49761 AC096649.2-201ENST00000416186 393 ntBASIC2.94□□□□□ -1.94
CLK3P49761 AC005326.1-201ENST00000429197 123 ntBASIC2.94□□□□□ -1.94
CLK3P49761 POLR2KP2-201ENST00000438155 177 ntBASIC2.94□□□□□ -1.94
CLK3P49761 AC097462.2-201ENST00000504623 481 ntBASIC2.94□□□□□ -1.94
CLK3P49761 RAC1P5-201ENST00000512182 576 ntBASIC2.94□□□□□ -1.94
CLK3P49761 SNORA40.9-201ENST00000515895 93 ntBASIC2.94□□□□□ -1.94
CLK3P49761 RNA5SP76-201ENST00000516277 87 ntBASIC2.94□□□□□ -1.94
CLK3P49761 SNORD19.2-201ENST00000516978 73 ntBASIC2.94□□□□□ -1.94
CLK3P49761 RNU6-58P-201ENST00000517143 103 ntBASIC2.94□□□□□ -1.94
CLK3P49761 MTND5P41-201ENST00000517498 206 ntBASIC2.94□□□□□ -1.94
CLK3P49761 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.94□□□□□ -1.94
CLK3P49761 MIR5680-201ENST00000577577 84 ntBASIC2.94□□□□□ -1.94
CLK3P49761 MIR5571-201ENST00000577998 113 ntBASIC2.94□□□□□ -1.94
CLK3P49761 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.94□□□□□ -1.94
CLK3P49761 AL078605.1-201ENST00000603529 500 ntBASIC2.94□□□□□ -1.94
CLK3P49761 AC108706.1-201ENST00000611053 297 ntBASIC2.94□□□□□ -1.94
CLK3P49761 AL359198.2-201ENST00000611836 194 ntBASIC2.94□□□□□ -1.94
CLK3P49761 SNORA43.4-201ENST00000629559 138 ntBASIC2.94□□□□□ -1.94
CLK3P49761 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLK3P49761 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.94□□□□□ -1.94
CLK3P49761 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
CLK3P49761 AC010889.1-201ENST00000566193 2666 ntBASIC2.94□□□□□ -1.94
CLK3P49761 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLK3P49761 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLK3P49761 BX322639.1-202ENST00000423987 2213 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms