Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 AL603914.1-201ENST00000401964 204 ntBASIC5.02□□□□□ -1.61
PRIM1P49642 AC245291.1-201ENST00000419501 328 ntBASIC5.02□□□□□ -1.61
PRIM1P49642 RPL23AP82-202ENST00000427528 469 ntBASIC5.02□□□□□ -1.61
PRIM1P49642 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
PRIM1P49642 RPL23AP7-203ENST00000449021 469 ntBASIC5.02□□□□□ -1.61
PRIM1P49642 AL031737.1-201ENST00000450125 223 ntBASIC5.02□□□□□ -1.61
PRIM1P49642 CENPBD1P1-201ENST00000464061 469 ntBASIC5.02□□□□□ -1.61
PRIM1P49642 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5.02□□□□□ -1.61
PRIM1P49642 RNU6-928P-201ENST00000516876 104 ntBASIC5.02□□□□□ -1.61
PRIM1P49642 RNU1-30P-201ENST00000606575 163 ntBASIC5.02□□□□□ -1.61
PRIM1P49642 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PRIM1P49642 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRIM1P49642 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC5.01□□□□□ -1.61
PRIM1P49642 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.01□□□□□ -1.61
PRIM1P49642 SNORA31-201ENST00000362607 130 ntBASIC5.01□□□□□ -1.61
PRIM1P49642 RNY1P11-201ENST00000363759 113 ntBASIC5.01□□□□□ -1.61
PRIM1P49642 RNU6-1210P-201ENST00000363775 107 ntBASIC5.01□□□□□ -1.61
PRIM1P49642 Y_RNA.294-201ENST00000364916 102 ntBASIC5.01□□□□□ -1.61
PRIM1P49642 RNU6-437P-201ENST00000459408 95 ntBASIC5.01□□□□□ -1.61
PRIM1P49642 RPL31P61-201ENST00000496160 376 ntBASIC5.01□□□□□ -1.61
PRIM1P49642 RNU6-126P-201ENST00000516685 103 ntBASIC5.01□□□□□ -1.61
PRIM1P49642 MIR3651-201ENST00000630427 90 ntBASIC5.01□□□□□ -1.61
PRIM1P49642 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.01□□□□□ -1.61
PRIM1P49642 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRIM1P49642 AF117829.1-206ENST00000621883 3802 ntBASIC5.01□□□□□ -1.61
PRIM1P49642 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PRIM1P49642 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PRIM1P49642 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5□□□□□ -1.61
PRIM1P49642 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
PRIM1P49642 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PRIM1P49642 AC069528.2-201ENST00000624849 1991 ntBASIC5□□□□□ -1.61
PRIM1P49642 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5□□□□□ -1.61
PRIM1P49642 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PRIM1P49642 RNU6-529P-201ENST00000363383 104 ntBASIC5□□□□□ -1.61
PRIM1P49642 Y_RNA.495-201ENST00000384435 112 ntBASIC5□□□□□ -1.61
PRIM1P49642 MIR548B-201ENST00000385247 97 ntBASIC5□□□□□ -1.61
PRIM1P49642 MIR1278-201ENST00000408753 81 ntBASIC5□□□□□ -1.61
PRIM1P49642 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5□□□□□ -1.61
PRIM1P49642 AC083863.1-201ENST00000438811 231 ntBASIC5□□□□□ -1.61
PRIM1P49642 RNU6-1299P-201ENST00000516316 100 ntBASIC5□□□□□ -1.61
PRIM1P49642 RNA5SP153-201ENST00000516498 76 ntBASIC5□□□□□ -1.61
PRIM1P49642 MIR5582-201ENST00000579697 68 ntBASIC5□□□□□ -1.61
PRIM1P49642 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC5□□□□□ -1.61
PRIM1P49642 MIR3609-201ENST00000582661 80 ntBASIC5□□□□□ -1.61
PRIM1P49642 POLR3GP1-201ENST00000594073 261 ntBASIC5□□□□□ -1.61
PRIM1P49642 AC091152.3-201ENST00000604227 325 ntBASIC5□□□□□ -1.61
PRIM1P49642 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5□□□□□ -1.61
PRIM1P49642 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC5□□□□□ -1.61
PRIM1P49642 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PRIM1P49642 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5□□□□□ -1.61
PRIM1P49642 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
PRIM1P49642 AC008555.8-201ENST00000623602 2168 ntBASIC4.99□□□□□ -1.61
PRIM1P49642 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.99□□□□□ -1.61
PRIM1P49642 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
PRIM1P49642 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.99□□□□□ -1.61
PRIM1P49642 RNU6-655P-201ENST00000362858 107 ntBASIC4.99□□□□□ -1.61
PRIM1P49642 SNORD58C-201ENST00000365223 64 ntBASIC4.99□□□□□ -1.61
PRIM1P49642 MIR634-201ENST00000385208 97 ntBASIC4.99□□□□□ -1.61
PRIM1P49642 MIR1185-2-201ENST00000408687 86 ntBASIC4.99□□□□□ -1.61
PRIM1P49642 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.99□□□□□ -1.61
PRIM1P49642 RN7SL585P-201ENST00000470538 280 ntBASIC4.99□□□□□ -1.61
PRIM1P49642 RN7SL271P-201ENST00000487601 295 ntBASIC4.99□□□□□ -1.61
PRIM1P49642 RNU6-412P-201ENST00000516434 106 ntBASIC4.99□□□□□ -1.61
PRIM1P49642 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.99□□□□□ -1.61
PRIM1P49642 AC091178.2-201ENST00000584401 117 ntBASIC4.99□□□□□ -1.61
PRIM1P49642 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.99□□□□□ -1.61
PRIM1P49642 AC005972.2-201ENST00000604690 348 ntBASIC4.99□□□□□ -1.61
PRIM1P49642 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.99□□□□□ -1.61
PRIM1P49642 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRIM1P49642 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRIM1P49642 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PRIM1P49642 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PRIM1P49642 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRIM1P49642 MFSD8-236ENST00000641509 4050 ntBASIC4.98□□□□□ -1.61
PRIM1P49642 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PRIM1P49642 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRIM1P49642 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRIM1P49642 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRIM1P49642 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRIM1P49642 U8.1-201ENST00000362843 134 ntBASIC4.98□□□□□ -1.61
PRIM1P49642 Y_RNA.116-201ENST00000363292 103 ntBASIC4.98□□□□□ -1.61
PRIM1P49642 RNU6-978P-201ENST00000364371 103 ntBASIC4.98□□□□□ -1.61
PRIM1P49642 Y_RNA.587-201ENST00000391210 103 ntBASIC4.98□□□□□ -1.61
PRIM1P49642 SNORA26-201ENST00000391286 122 ntBASIC4.98□□□□□ -1.61
PRIM1P49642 RN7SKP284-201ENST00000411002 343 ntBASIC4.98□□□□□ -1.61
PRIM1P49642 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.98□□□□□ -1.61
PRIM1P49642 AC023449.1-201ENST00000454464 154 ntBASIC4.98□□□□□ -1.61
PRIM1P49642 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.98□□□□□ -1.61
PRIM1P49642 AL031274.2-201ENST00000599419 203 ntBASIC4.98□□□□□ -1.61
PRIM1P49642 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRIM1P49642 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PRIM1P49642 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.98□□□□□ -1.61
PRIM1P49642 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PRIM1P49642 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.98□□□□□ -1.61
PRIM1P49642 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.97□□□□□ -1.61
PRIM1P49642 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.97□□□□□ -1.61
PRIM1P49642 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PRIM1P49642 Y_RNA.35-201ENST00000362601 101 ntBASIC4.97□□□□□ -1.61
PRIM1P49642 Y_RNA.617-201ENST00000410920 90 ntBASIC4.97□□□□□ -1.61
PRIM1P49642 RPL23AP54-201ENST00000495129 419 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms