Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
SHMT2P34897 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SHMT2P34897 MTND5P9-201ENST00000503854 1755 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 Y_RNA.123-201ENST00000363338 102 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 RNU1-42P-201ENST00000364033 160 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 Y_RNA.256-201ENST00000364594 104 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 SNORA18.2-201ENST00000383865 132 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 RNU6-1286P-201ENST00000383871 107 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 RNU6-214P-201ENST00000384130 107 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 Y_RNA.517-201ENST00000384551 106 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 MIR1304-201ENST00000408243 91 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 RN7SKP51-201ENST00000410781 304 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 RPS26P42-201ENST00000413485 326 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 AC016907.1-201ENST00000419483 435 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 AC108667.1-201ENST00000428618 249 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 USP9YP28-201ENST00000435142 589 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.45□□□□□ -2.18
SHMT2P34897 HMGN2P26-201ENST00000463169 339 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 AC010531.2-201ENST00000465012 153 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.45□□□□□ -2.18
SHMT2P34897 AC096745.1-201ENST00000509945 370 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 RNA5SP458-201ENST00000516188 119 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 Y_RNA.675-201ENST00000516389 149 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.45□□□□□ -2.18
SHMT2P34897 AP000942.3-201ENST00000603702 160 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 AL645939.4-201ENST00000604495 135 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 RPL17P51-201ENST00000605218 238 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 CTHRC1P1-201ENST00000605383 469 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 DISC2.1-201ENST00000612827 205 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 AC099654.12-201ENST00000639868 649 ntBASIC1.45□□□□□ -2.18
SHMT2P34897 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.45□□□□□ -2.18
SHMT2P34897 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.45□□□□□ -2.18
SHMT2P34897 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.45□□□□□ -2.18
SHMT2P34897 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
SHMT2P34897 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SHMT2P34897 RNU6-661P-201ENST00000362409 107 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 RNA5SP432-201ENST00000362480 116 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 Y_RNA.140-201ENST00000363474 103 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 SNORD113-7-201ENST00000363762 77 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 RNY3P3-201ENST00000363816 102 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 RNU6-438P-201ENST00000365561 103 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 Y_RNA.436-201ENST00000384097 102 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SHMT2P34897 RNU6-1093P-201ENST00000391194 107 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 MIR450B-201ENST00000401182 78 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 SNRPEP10-201ENST00000420249 274 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 MTCO3P46-201ENST00000425787 232 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 MTCO1P44-201ENST00000441935 243 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.44□□□□□ -2.18
SHMT2P34897 MTCO2P7-201ENST00000446518 666 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 RNU7-66P-201ENST00000459469 62 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 AF186996.7-201ENST00000492781 209 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 MTCO1P29-201ENST00000496868 288 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 AC114801.2-201ENST00000503825 781 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 AC105313.1-201ENST00000509121 353 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 RNU6-506P-201ENST00000516553 94 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 MRPS36P4-201ENST00000534436 298 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.44□□□□□ -2.18
SHMT2P34897 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.44□□□□□ -2.18
SHMT2P34897 AC015720.1-201ENST00000565251 277 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 SUB1P4-201ENST00000566062 339 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 AC010900.2-201ENST00000604508 210 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 AF250324.2-201ENST00000608299 610 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 AL512598.1-201ENST00000610158 273 ntBASIC1.44□□□□□ -2.18
SHMT2P34897 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SHMT2P34897 Y_RNA.38-201ENST00000362617 102 ntBASIC1.43□□□□□ -2.18
SHMT2P34897 RNU6-254P-201ENST00000363377 107 ntBASIC1.43□□□□□ -2.18
SHMT2P34897 RNU6-968P-201ENST00000384076 107 ntBASIC1.43□□□□□ -2.18
SHMT2P34897 Y_RNA.615-201ENST00000410769 117 ntBASIC1.43□□□□□ -2.18
SHMT2P34897 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.43□□□□□ -2.18
SHMT2P34897 AL354695.1-201ENST00000427935 228 ntBASIC1.43□□□□□ -2.18
SHMT2P34897 MTND3P21-201ENST00000433774 331 ntBASIC1.43□□□□□ -2.18
SHMT2P34897 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.43□□□□□ -2.18
SHMT2P34897 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.43□□□□□ -2.18
SHMT2P34897 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.43□□□□□ -2.18
SHMT2P34897 AC010409.1-201ENST00000487382 476 ntBASIC1.43□□□□□ -2.18
SHMT2P34897 AC097473.1-201ENST00000508142 408 ntBASIC1.43□□□□□ -2.18
SHMT2P34897 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.43□□□□□ -2.18
SHMT2P34897 RNA5SP61-201ENST00000516453 100 ntBASIC1.43□□□□□ -2.18
SHMT2P34897 SNORA44.1-201ENST00000517031 108 ntBASIC1.43□□□□□ -2.18
SHMT2P34897 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.43□□□□□ -2.18
SHMT2P34897 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.43□□□□□ -2.18
SHMT2P34897 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.43□□□□□ -2.18
SHMT2P34897 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SHMT2P34897 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.43□□□□□ -2.18
SHMT2P34897 AC245505.1-201ENST00000556398 224 ntBASIC1.43□□□□□ -2.18
SHMT2P34897 AC146944.4-201ENST00000602697 718 ntBASIC1.43□□□□□ -2.18
SHMT2P34897 AC016727.2-201ENST00000603988 621 ntBASIC1.43□□□□□ -2.18
SHMT2P34897 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.43□□□□□ -2.18
SHMT2P34897 MIR8076-201ENST00000611401 83 ntBASIC1.43□□□□□ -2.18
SHMT2P34897 RMST_3.1-201ENST00000611651 109 ntBASIC1.43□□□□□ -2.18
SHMT2P34897 AC015540.1-201ENST00000615828 501 ntBASIC1.43□□□□□ -2.18
SHMT2P34897 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.43□□□□□ -2.18
SHMT2P34897 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.43□□□□□ -2.18
SHMT2P34897 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.43□□□□□ -2.18
SHMT2P34897 MIR1321-201ENST00000637766 79 ntBASIC1.43□□□□□ -2.18
SHMT2P34897 RNU6-1090P-201ENST00000364065 94 ntBASIC1.42□□□□□ -2.18
SHMT2P34897 RNU6-1026P-201ENST00000384465 108 ntBASIC1.42□□□□□ -2.18
SHMT2P34897 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms