Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 MTATP6P23-201ENST00000440153 476 ntBASIC2.28□□□□□ -2.04
ABCD3P28288 AC007395.1-201ENST00000451333 677 ntBASIC2.28□□□□□ -2.04
ABCD3P28288 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.28□□□□□ -2.04
ABCD3P28288 RNA5SP384-201ENST00000516615 116 ntBASIC2.28□□□□□ -2.04
ABCD3P28288 RNU6-344P-201ENST00000516635 111 ntBASIC2.28□□□□□ -2.04
ABCD3P28288 RPS3AP23-202ENST00000574601 686 ntBASIC2.28□□□□□ -2.04
ABCD3P28288 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.28□□□□□ -2.04
ABCD3P28288 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.28□□□□□ -2.04
ABCD3P28288 AL132765.2-201ENST00000610812 351 ntBASIC2.28□□□□□ -2.04
ABCD3P28288 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.28□□□□□ -2.04
ABCD3P28288 AC130454.1-201ENST00000622948 401 ntBASIC2.28□□□□□ -2.04
ABCD3P28288 AL359757.2-201ENST00000624309 274 ntBASIC2.28□□□□□ -2.04
ABCD3P28288 MIR1302-1-201ENST00000637932 143 ntBASIC2.28□□□□□ -2.04
ABCD3P28288 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.28□□□□□ -2.04
ABCD3P28288 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.05
ABCD3P28288 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.05
ABCD3P28288 LINC02555-201ENST00000563933 1951 ntBASIC2.27□□□□□ -2.05
ABCD3P28288 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
ABCD3P28288 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.27□□□□□ -2.05
ABCD3P28288 RNU1-58P-201ENST00000362413 163 ntBASIC2.27□□□□□ -2.05
ABCD3P28288 Y_RNA.132-201ENST00000363421 102 ntBASIC2.27□□□□□ -2.05
ABCD3P28288 MTCYBP4-201ENST00000401524 249 ntBASIC2.27□□□□□ -2.05
ABCD3P28288 AL359511.1-201ENST00000402970 211 ntBASIC2.27□□□□□ -2.05
ABCD3P28288 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.27□□□□□ -2.05
ABCD3P28288 RPL23AP50-201ENST00000434149 455 ntBASIC2.27□□□□□ -2.05
ABCD3P28288 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.27□□□□□ -2.05
ABCD3P28288 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.27□□□□□ -2.05
ABCD3P28288 RNU1-131P-201ENST00000458943 161 ntBASIC2.27□□□□□ -2.05
ABCD3P28288 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.27□□□□□ -2.05
ABCD3P28288 AC055731.1-201ENST00000474387 401 ntBASIC2.27□□□□□ -2.05
ABCD3P28288 AC093303.1-201ENST00000514549 295 ntBASIC2.27□□□□□ -2.05
ABCD3P28288 RNU6-277P-201ENST00000516272 106 ntBASIC2.27□□□□□ -2.05
ABCD3P28288 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.27□□□□□ -2.05
ABCD3P28288 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.27□□□□□ -2.05
ABCD3P28288 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.27□□□□□ -2.05
ABCD3P28288 AC243829.7-201ENST00000633081 225 ntBASIC2.27□□□□□ -2.05
ABCD3P28288 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ABCD3P28288 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ABCD3P28288 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
ABCD3P28288 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
ABCD3P28288 RNU6-1164P-201ENST00000364428 107 ntBASIC2.26□□□□□ -2.05
ABCD3P28288 MIR487A-201ENST00000385009 80 ntBASIC2.26□□□□□ -2.05
ABCD3P28288 RNU6-159P-201ENST00000391080 106 ntBASIC2.26□□□□□ -2.05
ABCD3P28288 MIR1283-1-201ENST00000408494 87 ntBASIC2.26□□□□□ -2.05
ABCD3P28288 MTCO3P29-201ENST00000432119 779 ntBASIC2.26□□□□□ -2.05
ABCD3P28288 RPS12P2-201ENST00000439728 269 ntBASIC2.26□□□□□ -2.05
ABCD3P28288 AC074290.1-201ENST00000448883 135 ntBASIC2.26□□□□□ -2.05
ABCD3P28288 AC114982.1-201ENST00000469402 321 ntBASIC2.26□□□□□ -2.05
ABCD3P28288 RPL17P19-201ENST00000489069 552 ntBASIC2.26□□□□□ -2.05
ABCD3P28288 SCARNA16.2-201ENST00000516520 172 ntBASIC2.26□□□□□ -2.05
ABCD3P28288 MIR4753-201ENST00000585119 83 ntBASIC2.26□□□□□ -2.05
ABCD3P28288 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
ABCD3P28288 AL137847.3-201ENST00000611521 109 ntBASIC2.26□□□□□ -2.05
ABCD3P28288 AL008636.1-201ENST00000625038 1018 ntBASIC2.26□□□□□ -2.05
ABCD3P28288 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
ABCD3P28288 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.25□□□□□ -2.05
ABCD3P28288 AC009487.4-201ENST00000624969 3585 ntBASIC2.25□□□□□ -2.05
ABCD3P28288 RNU1-62P-201ENST00000362599 164 ntBASIC2.25□□□□□ -2.05
ABCD3P28288 RNU6-331P-201ENST00000384724 107 ntBASIC2.25□□□□□ -2.05
ABCD3P28288 SNORA80E-201ENST00000384744 137 ntBASIC2.25□□□□□ -2.05
ABCD3P28288 MIR190B-201ENST00000401119 79 ntBASIC2.25□□□□□ -2.05
ABCD3P28288 AC009963.1-201ENST00000417265 157 ntBASIC2.25□□□□□ -2.05
ABCD3P28288 AC007098.1-201ENST00000420122 367 ntBASIC2.25□□□□□ -2.05
ABCD3P28288 AL353997.1-201ENST00000432936 108 ntBASIC2.25□□□□□ -2.05
ABCD3P28288 SNRPEP8-201ENST00000442866 260 ntBASIC2.25□□□□□ -2.05
ABCD3P28288 AL513328.1-201ENST00000446460 224 ntBASIC2.25□□□□□ -2.05
ABCD3P28288 Y_RNA.653-201ENST00000459091 95 ntBASIC2.25□□□□□ -2.05
ABCD3P28288 AC097473.1-201ENST00000508142 408 ntBASIC2.25□□□□□ -2.05
ABCD3P28288 RNU2-34P-201ENST00000516534 121 ntBASIC2.25□□□□□ -2.05
ABCD3P28288 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.25□□□□□ -2.05
ABCD3P28288 APOOP3-201ENST00000536787 586 ntBASIC2.25□□□□□ -2.05
ABCD3P28288 AL355802.3-201ENST00000607571 545 ntBASIC2.25□□□□□ -2.05
ABCD3P28288 CTSLP2-204ENST00000629029 392 ntBASIC2.25□□□□□ -2.05
ABCD3P28288 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ABCD3P28288 AC131280.1-202ENST00000624067 4211 ntBASIC2.25□□□□□ -2.05
ABCD3P28288 AC008555.8-201ENST00000623602 2168 ntBASIC2.25□□□□□ -2.05
ABCD3P28288 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
ABCD3P28288 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
ABCD3P28288 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
ABCD3P28288 RNU6-23P-201ENST00000363283 107 ntBASIC2.24□□□□□ -2.05
ABCD3P28288 SNORA6-201ENST00000384033 151 ntBASIC2.24□□□□□ -2.05
ABCD3P28288 MIR586-201ENST00000385035 97 ntBASIC2.24□□□□□ -2.05
ABCD3P28288 MIR549A-201ENST00000385268 96 ntBASIC2.24□□□□□ -2.05
ABCD3P28288 RNU1-139P-201ENST00000391307 165 ntBASIC2.24□□□□□ -2.05
ABCD3P28288 SNORA75.6-201ENST00000391318 127 ntBASIC2.24□□□□□ -2.05
ABCD3P28288 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
ABCD3P28288 MIR1283-2-201ENST00000408621 87 ntBASIC2.24□□□□□ -2.05
ABCD3P28288 BX510359.4-201ENST00000423750 193 ntBASIC2.24□□□□□ -2.05
ABCD3P28288 USP9YP16-201ENST00000430287 407 ntBASIC2.24□□□□□ -2.05
ABCD3P28288 MTND3P23-201ENST00000431980 347 ntBASIC2.24□□□□□ -2.05
ABCD3P28288 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.24□□□□□ -2.05
ABCD3P28288 MTND2P29-201ENST00000438595 412 ntBASIC2.24□□□□□ -2.05
ABCD3P28288 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.24□□□□□ -2.05
ABCD3P28288 IPO7P1-201ENST00000442031 636 ntBASIC2.24□□□□□ -2.05
ABCD3P28288 AL357134.1-201ENST00000445848 426 ntBASIC2.24□□□□□ -2.05
ABCD3P28288 USP9YP23-201ENST00000455085 407 ntBASIC2.24□□□□□ -2.05
ABCD3P28288 AP000870.1-201ENST00000472927 406 ntBASIC2.24□□□□□ -2.05
ABCD3P28288 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.24□□□□□ -2.05
ABCD3P28288 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.24□□□□□ -2.05
ABCD3P28288 AC008549.1-201ENST00000512900 643 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms