Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.27□□□□□ -1.89
VAMP1P23763 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.27□□□□□ -1.89
VAMP1P23763 RNVU1-4-201ENST00000612985 164 ntBASIC3.27□□□□□ -1.89
VAMP1P23763 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.27□□□□□ -1.89
VAMP1P23763 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.27□□□□□ -1.89
VAMP1P23763 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
VAMP1P23763 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
VAMP1P23763 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.26□□□□□ -1.89
VAMP1P23763 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
VAMP1P23763 MIR184-201ENST00000384962 84 ntBASIC3.26□□□□□ -1.89
VAMP1P23763 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.26□□□□□ -1.89
VAMP1P23763 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.26□□□□□ -1.89
VAMP1P23763 AC025750.2-201ENST00000442609 450 ntBASIC3.26□□□□□ -1.89
VAMP1P23763 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.26□□□□□ -1.89
VAMP1P23763 RN7SL810P-201ENST00000493031 276 ntBASIC3.26□□□□□ -1.89
VAMP1P23763 RNA5SP20-201ENST00000515976 84 ntBASIC3.26□□□□□ -1.89
VAMP1P23763 RNU6-1041P-201ENST00000516254 102 ntBASIC3.26□□□□□ -1.89
VAMP1P23763 RNU6-191P-201ENST00000516295 94 ntBASIC3.26□□□□□ -1.89
VAMP1P23763 RN7SKP209-201ENST00000516888 304 ntBASIC3.26□□□□□ -1.89
VAMP1P23763 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.26□□□□□ -1.89
VAMP1P23763 AC090877.1-201ENST00000561418 344 ntBASIC3.26□□□□□ -1.89
VAMP1P23763 MIR4646-201ENST00000580775 63 ntBASIC3.26□□□□□ -1.89
VAMP1P23763 AC010900.2-201ENST00000604508 210 ntBASIC3.26□□□□□ -1.89
VAMP1P23763 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.26□□□□□ -1.89
VAMP1P23763 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.26□□□□□ -1.89
VAMP1P23763 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.26□□□□□ -1.89
VAMP1P23763 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VAMP1P23763 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VAMP1P23763 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.26□□□□□ -1.89
VAMP1P23763 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
VAMP1P23763 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
VAMP1P23763 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.25□□□□□ -1.89
VAMP1P23763 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
VAMP1P23763 SNORA27.1-201ENST00000362604 124 ntBASIC3.25□□□□□ -1.89
VAMP1P23763 Y_RNA.341-201ENST00000365341 102 ntBASIC3.25□□□□□ -1.89
VAMP1P23763 RNU1-109P-201ENST00000383960 147 ntBASIC3.25□□□□□ -1.89
VAMP1P23763 RNU6-662P-201ENST00000384253 104 ntBASIC3.25□□□□□ -1.89
VAMP1P23763 RNU1-148P-201ENST00000384472 162 ntBASIC3.25□□□□□ -1.89
VAMP1P23763 AL355796.1-201ENST00000406706 323 ntBASIC3.25□□□□□ -1.89
VAMP1P23763 RNA5SP270-201ENST00000411361 118 ntBASIC3.25□□□□□ -1.89
VAMP1P23763 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.25□□□□□ -1.89
VAMP1P23763 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.25□□□□□ -1.89
VAMP1P23763 AC011406.1-201ENST00000512440 370 ntBASIC3.25□□□□□ -1.89
VAMP1P23763 Y_RNA.680-201ENST00000516441 93 ntBASIC3.25□□□□□ -1.89
VAMP1P23763 RNA5SP380-201ENST00000517190 98 ntBASIC3.25□□□□□ -1.89
VAMP1P23763 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VAMP1P23763 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VAMP1P23763 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VAMP1P23763 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.24□□□□□ -1.89
VAMP1P23763 Y_RNA.20-201ENST00000362479 113 ntBASIC3.24□□□□□ -1.89
VAMP1P23763 VTRNA1-1-201ENST00000363120 99 ntBASIC3.24□□□□□ -1.89
VAMP1P23763 Y_RNA.275-201ENST00000364726 110 ntBASIC3.24□□□□□ -1.89
VAMP1P23763 RNU6-1318P-201ENST00000365389 103 ntBASIC3.24□□□□□ -1.89
VAMP1P23763 AP002088.1-201ENST00000382740 395 ntBASIC3.24□□□□□ -1.89
VAMP1P23763 MIR181A2-201ENST00000384863 110 ntBASIC3.24□□□□□ -1.89
VAMP1P23763 SPTLC1P2-201ENST00000407089 121 ntBASIC3.24□□□□□ -1.89
VAMP1P23763 RNU2-61P-201ENST00000411069 191 ntBASIC3.24□□□□□ -1.89
VAMP1P23763 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.24□□□□□ -1.89
VAMP1P23763 RPL23AP7-203ENST00000449021 469 ntBASIC3.24□□□□□ -1.89
VAMP1P23763 ATP5J2P3-201ENST00000451550 258 ntBASIC3.24□□□□□ -1.89
VAMP1P23763 CENPBD1P1-201ENST00000464061 469 ntBASIC3.24□□□□□ -1.89
VAMP1P23763 RN7SL594P-201ENST00000470590 287 ntBASIC3.24□□□□□ -1.89
VAMP1P23763 RN7SL691P-201ENST00000494487 301 ntBASIC3.24□□□□□ -1.89
VAMP1P23763 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.24□□□□□ -1.89
VAMP1P23763 MIR4270-201ENST00000581799 70 ntBASIC3.24□□□□□ -1.89
VAMP1P23763 RMST_8.1-201ENST00000610287 165 ntBASIC3.24□□□□□ -1.89
VAMP1P23763 AC022202.1-201ENST00000613515 211 ntBASIC3.24□□□□□ -1.89
VAMP1P23763 AC068870.2-201ENST00000620635 389 ntBASIC3.24□□□□□ -1.89
VAMP1P23763 AC078938.1-201ENST00000620993 318 ntBASIC3.24□□□□□ -1.89
VAMP1P23763 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
VAMP1P23763 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VAMP1P23763 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VAMP1P23763 AC017071.1-201ENST00000564407 2204 ntBASIC3.24□□□□□ -1.89
VAMP1P23763 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VAMP1P23763 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VAMP1P23763 CENPCP1-201ENST00000533085 2578 ntBASIC3.23□□□□□ -1.89
VAMP1P23763 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VAMP1P23763 AC079741.1-201ENST00000321498 212 ntBASIC3.23□□□□□ -1.89
VAMP1P23763 SNORD114-7-201ENST00000362520 77 ntBASIC3.23□□□□□ -1.89
VAMP1P23763 RNU6-740P-201ENST00000364734 105 ntBASIC3.23□□□□□ -1.89
VAMP1P23763 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VAMP1P23763 RNU6-1289P-201ENST00000384431 106 ntBASIC3.23□□□□□ -1.89
VAMP1P23763 SNORA40.19-201ENST00000390846 128 ntBASIC3.23□□□□□ -1.89
VAMP1P23763 RNA5SP323-201ENST00000391094 133 ntBASIC3.23□□□□□ -1.89
VAMP1P23763 SNORA57.3-201ENST00000411095 141 ntBASIC3.23□□□□□ -1.89
VAMP1P23763 ELOCP19-201ENST00000411919 318 ntBASIC3.23□□□□□ -1.89
VAMP1P23763 AC060773.1-201ENST00000421698 310 ntBASIC3.23□□□□□ -1.89
VAMP1P23763 HSPE1P21-201ENST00000438283 308 ntBASIC3.23□□□□□ -1.89
VAMP1P23763 RPS29P31-201ENST00000446147 164 ntBASIC3.23□□□□□ -1.89
VAMP1P23763 RPS4XP2-201ENST00000458402 793 ntBASIC3.23□□□□□ -1.89
VAMP1P23763 RNU1-131P-201ENST00000458943 161 ntBASIC3.23□□□□□ -1.89
VAMP1P23763 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.23□□□□□ -1.89
VAMP1P23763 RN7SL636P-201ENST00000497504 294 ntBASIC3.23□□□□□ -1.89
VAMP1P23763 RN7SKP92-201ENST00000517266 244 ntBASIC3.23□□□□□ -1.89
VAMP1P23763 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.23□□□□□ -1.89
VAMP1P23763 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.23□□□□□ -1.89
VAMP1P23763 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.23□□□□□ -1.89
VAMP1P23763 MIR3668-201ENST00000582138 75 ntBASIC3.23□□□□□ -1.89
VAMP1P23763 MIR4438-201ENST00000585271 93 ntBASIC3.23□□□□□ -1.89
VAMP1P23763 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms